RNA–Protein interactions for RNA: ENST00000367064.7

CD55-204, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD55, Length 2,760 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-204ENST00000367064 LTBP4Q8N2S1 1624 aa19.56■□□□□ 0.72
CD55-204ENST00000367064 RAD50Q92878 1312 aa19.56■□□□□ 0.72
CD55-204ENST00000367064 SKOR2Q2VWA4 1001 aaPredicted RBP19.55■□□□□ 0.72
CD55-204ENST00000367064 DDX49Q9Y6V7 483 aaKnown RBP19.55■□□□□ 0.72
CD55-204ENST00000367064 ROBO1Q9Y6N7 1651 aa19.55■□□□□ 0.72
CD55-204ENST00000367064 MCM2P49736 904 aa19.55■□□□□ 0.72
CD55-204ENST00000367064 RASEFQ8IZ41 740 aa19.55■□□□□ 0.72
CD55-204ENST00000367064 BOLA2Q9H3K6 86 aa19.55■□□□□ 0.72
CD55-204ENST00000367064 NCLP19338 710 aaKnown RBP19.55■□□□□ 0.72
CD55-204ENST00000367064 SNX14Q9Y5W7 946 aa19.55■□□□□ 0.72
CD55-204ENST00000367064 A0A087WZG4 1122 aa19.54■□□□□ 0.72
CD55-204ENST00000367064 COL22A1Q8NFW1 1626 aaPredicted RBP19.54■□□□□ 0.72
CD55-204ENST00000367064 SHANK3Q9BYB0 1731 aa19.54■□□□□ 0.72
CD55-204ENST00000367064 CLEC17AQ6ZS10 378 aa19.54■□□□□ 0.72
CD55-204ENST00000367064 ISY1Q9ULR0 285 aaKnown RBP19.54■□□□□ 0.72
CD55-204ENST00000367064 PCDH11XQ9BZA7 1347 aa19.53■□□□□ 0.72
CD55-204ENST00000367064 PCDH11YQ9BZA8 1340 aa19.53■□□□□ 0.72
CD55-204ENST00000367064 EVA1CP58658 441 aa19.53■□□□□ 0.72
CD55-204ENST00000367064 PTH1RQ03431 593 aa19.53■□□□□ 0.72
CD55-204ENST00000367064 A1BGP04217 495 aa19.53■□□□□ 0.72
CD55-204ENST00000367064 CPA1P15085 419 aa19.53■□□□□ 0.72
CD55-204ENST00000367064 PTMSP20962 102 aa19.53■□□□□ 0.72
CD55-204ENST00000367064 NBPF26B4DH59 902 aa19.52■□□□□ 0.72
CD55-204ENST00000367064 NBPF14Q5TI25 921 aa19.52■□□□□ 0.72
CD55-204ENST00000367064 NBPF10Q6P3W6 841 aaKnown RBP19.52■□□□□ 0.72
CD55-204ENST00000367064 NBPF15Q8N660 670 aa19.52■□□□□ 0.72
CD55-204ENST00000367064 RUFY2Q8WXA3 655 aa19.52■□□□□ 0.72
CD55-204ENST00000367064 EVI5LQ96CN4 794 aa19.52■□□□□ 0.72
CD55-204ENST00000367064 AFDNP55196 1824 aaKnown RBP19.52■□□□□ 0.71
CD55-204ENST00000367064 TTLL7Q6ZT98 887 aa19.51■□□□□ 0.71
CD55-204ENST00000367064 FAM227BQ96M60 508 aa19.51■□□□□ 0.71
CD55-204ENST00000367064 CHMP3Q9Y3E7 222 aa19.51■□□□□ 0.71
CD55-204ENST00000367064 IL2RBP14784 551 aa19.51■□□□□ 0.71
CD55-204ENST00000367064 FAM13BQ9NYF5 915 aa19.51■□□□□ 0.71
CD55-204ENST00000367064 PRPF40AO75400 957 aaKnown RBP19.5■□□□□ 0.71
CD55-204ENST00000367064 CUL4AQ13619 759 aa19.5■□□□□ 0.71
CD55-204ENST00000367064 PLBD2Q8NHP8 589 aa19.5■□□□□ 0.71
CD55-204ENST00000367064 CCDC9Q9Y3X0 531 aaKnown RBP19.5■□□□□ 0.71
CD55-204ENST00000367064 FOXD4L6Q3SYB3 417 aaPredicted RBP19.5■□□□□ 0.71
CD55-204ENST00000367064 PRPF40BQ6NWY9 871 aaKnown RBP19.5■□□□□ 0.71
CD55-204ENST00000367064 FOXD4L3Q6VB84 417 aaPredicted RBP19.5■□□□□ 0.71
CD55-204ENST00000367064 EDC3Q96F86 508 aaKnown RBP19.49■□□□□ 0.71
CD55-204ENST00000367064 ZNF330Q9Y3S2 320 aaPredicted RBP19.49■□□□□ 0.71
CD55-204ENST00000367064 KAT6BQ8WYB5 2073 aa19.49■□□□□ 0.71
CD55-204ENST00000367064 EPB41L2O43491 1005 aaKnown RBP19.49■□□□□ 0.71
CD55-204ENST00000367064 OFD1O75665 1012 aa19.49■□□□□ 0.71
CD55-204ENST00000367064 CASTP20810 708 aaKnown RBP19.49■□□□□ 0.71
CD55-204ENST00000367064 PTPN12Q05209 780 aaKnown RBP19.49■□□□□ 0.71
CD55-204ENST00000367064 TFCP2Q12800 502 aa19.49■□□□□ 0.71
CD55-204ENST00000367064 ZBTB3Q9H5J0 574 aa19.49■□□□□ 0.71
CD55-204ENST00000367064 LMBRD1Q9NUN5 540 aa19.49■□□□□ 0.71
CD55-204ENST00000367064 NDUFB9Q9Y6M9 179 aa19.49■□□□□ 0.71
CD55-204ENST00000367064 NMIQ13287 307 aaPredicted RBP19.49■□□□□ 0.71
CD55-204ENST00000367064 FSD1Q9BTV5 496 aa19.49■□□□□ 0.71
CD55-204ENST00000367064 CARD10Q9BWT7 1032 aa19.49■□□□□ 0.71
CD55-204ENST00000367064 COL14A1Q05707 1796 aaKnown RBP19.48■□□□□ 0.71
CD55-204ENST00000367064 GLI3P10071 1580 aa19.48■□□□□ 0.71
CD55-204ENST00000367064 ARFGEF2Q9Y6D5 1785 aa19.48■□□□□ 0.71
CD55-204ENST00000367064 DTNBO60941 627 aa19.48■□□□□ 0.71
CD55-204ENST00000367064 RFX5P48382 616 aaPredicted RBP19.48■□□□□ 0.71
CD55-204ENST00000367064 AK2P54819 239 aa19.48■□□□□ 0.71
CD55-204ENST00000367064 KLHL40Q2TBA0 621 aa19.48■□□□□ 0.71
CD55-204ENST00000367064 LMBR1LQ6UX01 489 aa19.48■□□□□ 0.71
CD55-204ENST00000367064 IL17RAQ96F46 866 aa19.48■□□□□ 0.71
CD55-204ENST00000367064 KCNJ4P48050 445 aa19.47■□□□□ 0.71
CD55-204ENST00000367064 ADCK5Q3MIX3 580 aa19.47■□□□□ 0.71
CD55-204ENST00000367064 ERVV-2B6SEH9 535 aa19.47■□□□□ 0.71
CD55-204ENST00000367064 CAVIN1Q6NZI2 390 aaKnown RBP19.47■□□□□ 0.71
CD55-204ENST00000367064 COPRSQ9NQ92 184 aa19.46■□□□□ 0.71
CD55-204ENST00000367064 PAPPAQ13219 1627 aa19.46■□□□□ 0.71
CD55-204ENST00000367064 LAMB4A4D0S4 1761 aa19.46■□□□□ 0.71
CD55-204ENST00000367064 ZSCAN30Q86W11 494 aa19.46■□□□□ 0.71
CD55-204ENST00000367064 INTS4Q96HW7 963 aaKnown RBP19.46■□□□□ 0.71
CD55-204ENST00000367064 JAKMIP1Q96N16 626 aaKnown RBP19.46■□□□□ 0.71
CD55-204ENST00000367064 COL16A1Q07092 1604 aaPredicted RBP19.46■□□□□ 0.71
CD55-204ENST00000367064 A0A0D9SFI3 127 aa19.45■□□□□ 0.7
CD55-204ENST00000367064 FGD1P98174 961 aa19.45■□□□□ 0.7
CD55-204ENST00000367064 DBNLQ9UJU6 430 aaKnown RBP19.45■□□□□ 0.7
CD55-204ENST00000367064 UBR2Q8IWV8 1755 aa19.45■□□□□ 0.7
CD55-204ENST00000367064 TNNI3KQ59H18 835 aa19.45■□□□□ 0.7
CD55-204ENST00000367064 TTC14Q96N46 770 aa19.45■□□□□ 0.7
CD55-204ENST00000367064 FPGT-TNNI3KV9GXZ4 949 aa19.45■□□□□ 0.7
CD55-204ENST00000367064 RUFY3Q7L099 469 aa19.44■□□□□ 0.7
CD55-204ENST00000367064 ARID3AQ99856 593 aa19.44■□□□□ 0.7
CD55-204ENST00000367064 CCDC171Q6TFL3 1326 aa19.44■□□□□ 0.7
CD55-204ENST00000367064 BRD1O95696 1058 aa19.44■□□□□ 0.7
CD55-204ENST00000367064 CASP7P55210 303 aa19.44■□□□□ 0.7
CD55-204ENST00000367064 RABL6Q3YEC7 729 aaPredicted RBP19.44■□□□□ 0.7
CD55-204ENST00000367064 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.44■□□□□ 0.7
CD55-204ENST00000367064 RBM8AQ9Y5S9 174 aaKnown RBP19.44■□□□□ 0.7
CD55-204ENST00000367064 MAP7D2Q96T17 732 aa19.44■□□□□ 0.7
CD55-204ENST00000367064 NKX1-1Q15270 411 aaPredicted RBP19.43■□□□□ 0.7
CD55-204ENST00000367064 DNAJC2Q99543 621 aaKnown RBP19.43■□□□□ 0.7
CD55-204ENST00000367064 DBNDD2Q9BQY9 259 aa19.43■□□□□ 0.7
CD55-204ENST00000367064 CWC25Q9NXE8 425 aaPredicted RBP19.43■□□□□ 0.7
CD55-204ENST00000367064 RBM27Q9P2N5 1060 aaKnown RBP19.43■□□□□ 0.7
CD55-204ENST00000367064 R3HCC1Q9Y3T6 440 aaKnown RBP19.43■□□□□ 0.7
CD55-204ENST00000367064 PLCH1Q4KWH8 1693 aa19.42■□□□□ 0.7
CD55-204ENST00000367064 CHGBP05060 677 aa19.42■□□□□ 0.7
CD55-204ENST00000367064 CCDC173Q0VFZ6 552 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms