RNA–Protein interactions for RNA: ENST00000365052.1

RNU1-43P-201, Transcript of RNA, U1 small nuclear 43, pseudogene, humanhuman

BASIC

Gene RNU1-43P, Length 165 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-43P-201ENST00000365052 DLEC1Q9Y238 1755 aa6.87□□□□□ -1.31
RNU1-43P-201ENST00000365052 COL11A2P13942 1736 aaPredicted RBP6.87□□□□□ -1.31
RNU1-43P-201ENST00000365052 ABCC12Q96J65 1359 aa6.86□□□□□ -1.31
RNU1-43P-201ENST00000365052 ERBB4Q15303 1308 aa6.86□□□□□ -1.31
RNU1-43P-201ENST00000365052 ZNF853P0CG23 659 aa6.86□□□□□ -1.31
RNU1-43P-201ENST00000365052 VEGFAP15692 232 aaPredicted RBP6.86□□□□□ -1.31
RNU1-43P-201ENST00000365052 GNAI1P63096 354 aa6.86□□□□□ -1.31
RNU1-43P-201ENST00000365052 FKBP4Q02790 459 aaKnown RBP eCLIP6.86□□□□□ -1.31
RNU1-43P-201ENST00000365052 TCIRG1Q13488 830 aa6.86□□□□□ -1.31
RNU1-43P-201ENST00000365052 PARP10Q53GL7 1025 aa6.86□□□□□ -1.31
RNU1-43P-201ENST00000365052 CCDC93Q567U6 631 aa6.86□□□□□ -1.31
RNU1-43P-201ENST00000365052 ANKRD13DQ6ZTN6 518 aa6.86□□□□□ -1.31
RNU1-43P-201ENST00000365052 FAM9BQ8IZU0 186 aa6.86□□□□□ -1.31
RNU1-43P-201ENST00000365052 C8orf58Q8NAV2 365 aa6.86□□□□□ -1.31
RNU1-43P-201ENST00000365052 JARID2Q92833 1246 aaPredicted RBP6.86□□□□□ -1.31
RNU1-43P-201ENST00000365052 RBM17Q96I25 401 aaKnown RBP6.86□□□□□ -1.31
RNU1-43P-201ENST00000365052 TAOK3Q9H2K8 898 aa6.86□□□□□ -1.31
RNU1-43P-201ENST00000365052 POTECB2RU33 542 aa6.85□□□□□ -1.31
RNU1-43P-201ENST00000365052 RGL2O15211 777 aa6.85□□□□□ -1.31
RNU1-43P-201ENST00000365052 HSP90AB3PQ58FF7 597 aa6.85□□□□□ -1.31
RNU1-43P-201ENST00000365052 SOGA3Q5TF21 947 aa6.85□□□□□ -1.31
RNU1-43P-201ENST00000365052 RIC3Q7Z5B4 369 aa6.85□□□□□ -1.31
RNU1-43P-201ENST00000365052 NLRP10Q86W26 655 aa6.85□□□□□ -1.31
RNU1-43P-201ENST00000365052 TSPYL6Q8N831 410 aa6.85□□□□□ -1.31
RNU1-43P-201ENST00000365052 PLBD2Q8NHP8 589 aa6.85□□□□□ -1.31
RNU1-43P-201ENST00000365052 RBM46Q8TBY0 533 aaKnown RBP6.85□□□□□ -1.31
RNU1-43P-201ENST00000365052 TSR2Q969E8 191 aaKnown RBP6.85□□□□□ -1.31
RNU1-43P-201ENST00000365052 FAM89AQ96GI7 184 aa6.85□□□□□ -1.31
RNU1-43P-201ENST00000365052 IFT57Q9NWB7 429 aa6.85□□□□□ -1.31
RNU1-43P-201ENST00000365052 DBF4Q9UBU7 674 aaPredicted RBP6.85□□□□□ -1.31
RNU1-43P-201ENST00000365052 FER1L6Q2WGJ9 1857 aa6.85□□□□□ -1.31
RNU1-43P-201ENST00000365052 PPEF1O14829 653 aaPredicted RBP6.84□□□□□ -1.31
RNU1-43P-201ENST00000365052 IARSP41252 1262 aaKnown RBP6.84□□□□□ -1.31
RNU1-43P-201ENST00000365052 CALD1Q05682 793 aaKnown RBP6.84□□□□□ -1.31
RNU1-43P-201ENST00000365052 SLC10A5Q5PT55 438 aa6.84□□□□□ -1.31
RNU1-43P-201ENST00000365052 WWC1Q8IX03 1113 aa6.84□□□□□ -1.31
RNU1-43P-201ENST00000365052 RTKN2Q8IZC4 609 aa6.84□□□□□ -1.31
RNU1-43P-201ENST00000365052 MYD88Q99836 296 aa6.84□□□□□ -1.31
RNU1-43P-201ENST00000365052 HYPKQ9NX55 129 aa6.84□□□□□ -1.31
RNU1-43P-201ENST00000365052 CLEC11AQ9Y240 323 aa6.84□□□□□ -1.31
RNU1-43P-201ENST00000365052 GJA3Q9Y6H8 435 aa6.84□□□□□ -1.31
RNU1-43P-201ENST00000365052 LTBP3Q9NS15 1303 aa6.83□□□□□ -1.32
RNU1-43P-201ENST00000365052 POTEIP0CG38 1075 aa6.83□□□□□ -1.32
RNU1-43P-201ENST00000365052 POTEJP0CG39 1038 aa6.83□□□□□ -1.32
RNU1-43P-201ENST00000365052 HOXA10P31260 410 aaPredicted RBP6.83□□□□□ -1.32
RNU1-43P-201ENST00000365052 CRY2Q49AN0 593 aa6.83□□□□□ -1.32
RNU1-43P-201ENST00000365052 DDX46Q7L014 1031 aaKnown RBP6.83□□□□□ -1.32
RNU1-43P-201ENST00000365052 CRAMP1Q96RY5 1269 aa6.83□□□□□ -1.32
RNU1-43P-201ENST00000365052 ISCA1Q9BUE6 129 aa6.83□□□□□ -1.32
RNU1-43P-201ENST00000365052 TMX4Q9H1E5 349 aaPredicted RBP6.83□□□□□ -1.32
RNU1-43P-201ENST00000365052 TNRC6CQ9HCJ0 1690 aaKnown RBP6.83□□□□□ -1.32
RNU1-43P-201ENST00000365052 ABCC4O15439 1325 aa6.82□□□□□ -1.32
RNU1-43P-201ENST00000365052 SH3TC1Q8TE82 1336 aa6.82□□□□□ -1.32
RNU1-43P-201ENST00000365052 ZNF541Q9H0D2 1346 aa6.82□□□□□ -1.32
RNU1-43P-201ENST00000365052 DICER1Q9UPY3 1922 aaKnown RBP6.82□□□□□ -1.32
RNU1-43P-201ENST00000365052 TAF1P21675 1872 aa6.82□□□□□ -1.32
RNU1-43P-201ENST00000365052 HOXB7P09629 217 aa6.82□□□□□ -1.32
RNU1-43P-201ENST00000365052 APLP1P51693 650 aa6.82□□□□□ -1.32
RNU1-43P-201ENST00000365052 GOLGA2Q08379 1002 aa6.82□□□□□ -1.32
RNU1-43P-201ENST00000365052 FSTL1Q12841 308 aa6.82□□□□□ -1.32
RNU1-43P-201ENST00000365052 AOC3Q16853 763 aa6.82□□□□□ -1.32
RNU1-43P-201ENST00000365052 EAPPQ56P03 285 aaPredicted RBP6.82□□□□□ -1.32
RNU1-43P-201ENST00000365052 CCDC30Q5VVM6 783 aa6.82□□□□□ -1.32
RNU1-43P-201ENST00000365052 G2E3Q7L622 706 aa6.82□□□□□ -1.32
RNU1-43P-201ENST00000365052 LARGE2Q8N3Y3 721 aa6.82□□□□□ -1.32
RNU1-43P-201ENST00000365052 SMC1BQ8NDV3 1235 aa6.82□□□□□ -1.32
RNU1-43P-201ENST00000365052 JDP2Q8WYK2 163 aa6.82□□□□□ -1.32
RNU1-43P-201ENST00000365052 CCDC85AQ96PX6 553 aaPredicted RBP6.82□□□□□ -1.32
RNU1-43P-201ENST00000365052 TIAM2Q8IVF5 1701 aa6.81□□□□□ -1.32
RNU1-43P-201ENST00000365052 ZC3H4Q9UPT8 1303 aaKnown RBP6.81□□□□□ -1.32
RNU1-43P-201ENST00000365052 IRS4O14654 1257 aaPredicted RBP6.81□□□□□ -1.32
RNU1-43P-201ENST00000365052 PPIP5K2O43314 1243 aa6.81□□□□□ -1.32
RNU1-43P-201ENST00000365052 BBOX1O75936 387 aa6.81□□□□□ -1.32
RNU1-43P-201ENST00000365052 SLC4A2P04920 1241 aa6.81□□□□□ -1.32
RNU1-43P-201ENST00000365052 EIF6P56537 245 aaKnown RBP6.81□□□□□ -1.32
RNU1-43P-201ENST00000365052 TWISTNBQ3B726 338 aaPredicted RBP6.81□□□□□ -1.32
RNU1-43P-201ENST00000365052 CC2D2BQ6DHV5 1058 aa6.81□□□□□ -1.32
RNU1-43P-201ENST00000365052 SP8Q8IXZ3 490 aa6.81□□□□□ -1.32
RNU1-43P-201ENST00000365052 MPNDQ8N594 471 aa6.81□□□□□ -1.32
RNU1-43P-201ENST00000365052 DNAJC5GQ8N7S2 189 aa6.81□□□□□ -1.32
RNU1-43P-201ENST00000365052 CELF1Q92879 486 aaKnown RBP6.81□□□□□ -1.32
RNU1-43P-201ENST00000365052 PSMD1Q99460 953 aa6.81□□□□□ -1.32
RNU1-43P-201ENST00000365052 MAP3K2Q9Y2U5 619 aa6.81□□□□□ -1.32
RNU1-43P-201ENST00000365052 ATP6V0A2Q9Y487 856 aa6.81□□□□□ -1.32
RNU1-43P-201ENST00000365052 ARFGEF2Q9Y6D5 1785 aa6.81□□□□□ -1.32
RNU1-43P-201ENST00000365052 RNF123Q5XPI4 1314 aa6.8□□□□□ -1.32
RNU1-43P-201ENST00000365052 PI4KAP2A4QPH2 592 aa6.8□□□□□ -1.32
RNU1-43P-201ENST00000365052 FZD9O00144 591 aa6.8□□□□□ -1.32
RNU1-43P-201ENST00000365052 RIMBP2O15034 1052 aa6.8□□□□□ -1.32
RNU1-43P-201ENST00000365052 DDX58O95786 925 aaKnown RBP6.8□□□□□ -1.32
RNU1-43P-201ENST00000365052 EXOSC9Q06265 439 aaKnown RBP6.8□□□□□ -1.32
RNU1-43P-201ENST00000365052 GRAPQ13588 217 aa6.8□□□□□ -1.32
RNU1-43P-201ENST00000365052 CCDC27Q2M243 656 aa6.8□□□□□ -1.32
RNU1-43P-201ENST00000365052 DPP8Q6V1X1 898 aaPredicted RBP6.8□□□□□ -1.32
RNU1-43P-201ENST00000365052 PI4KAP1Q8N8J0 262 aa6.8□□□□□ -1.32
RNU1-43P-201ENST00000365052 GRAPLQ8TC17 118 aaPredicted RBP6.8□□□□□ -1.32
RNU1-43P-201ENST00000365052 METTL22Q9BUU2 404 aaPredicted RBP6.8□□□□□ -1.32
RNU1-43P-201ENST00000365052 STK31Q9BXU1 1019 aa6.8□□□□□ -1.32
RNU1-43P-201ENST00000365052 TAF1DQ9H5J8 278 aaPredicted RBP6.8□□□□□ -1.32
RNU1-43P-201ENST00000365052 SPINK5Q9NQ38 1064 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms