RNA–Protein interactions for RNA: ENST00000361813.5

SMG5-201, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG5, Length 4,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-201ENST00000361813 CHPF2Q9P2E5 772 aa20.73■□□□□ 0.91
SMG5-201ENST00000361813 KIAA0754O94854 1291 aa20.73■□□□□ 0.91
SMG5-201ENST00000361813 CRACR2AQ9BSW2 395 aa20.73■□□□□ 0.91
SMG5-201ENST00000361813 GBP3Q9H0R5 595 aa20.73■□□□□ 0.91
SMG5-201ENST00000361813 DEF6Q9H4E7 631 aa20.73■□□□□ 0.91
SMG5-201ENST00000361813 DDX46Q7L014 1031 aaKnown RBP20.72■□□□□ 0.91
SMG5-201ENST00000361813 ZNF397Q8NF99 534 aaPredicted RBP20.72■□□□□ 0.91
SMG5-201ENST00000361813 NACAP1Q9BZK3 213 aa20.72■□□□□ 0.91
SMG5-201ENST00000361813 ACEP12821 1306 aa20.72■□□□□ 0.91
SMG5-201ENST00000361813 NMIQ13287 307 aaPredicted RBP20.71■□□□□ 0.91
SMG5-201ENST00000361813 MTHFSDQ2M296 383 aaKnown RBP20.71■□□□□ 0.91
SMG5-201ENST00000361813 LMOD1P29536 600 aaPredicted RBP20.71■□□□□ 0.91
SMG5-201ENST00000361813 ERBB4Q15303 1308 aa20.71■□□□□ 0.91
SMG5-201ENST00000361813 UBASH3AP57075 661 aa20.71■□□□□ 0.91
SMG5-201ENST00000361813 CREB3L3Q68CJ9 461 aa20.71■□□□□ 0.91
SMG5-201ENST00000361813 ZBTB9Q96C00 473 aa20.71■□□□□ 0.91
SMG5-201ENST00000361813 CENPHQ9H3R5 247 aa20.71■□□□□ 0.91
SMG5-201ENST00000361813 SOS1Q07889 1333 aaPredicted RBP20.71■□□□□ 0.91
SMG5-201ENST00000361813 ZSCAN25Q6NSZ9 544 aa20.7■□□□□ 0.9
SMG5-201ENST00000361813 Q6ZUG5 572 aa20.7■□□□□ 0.9
SMG5-201ENST00000361813 PTPRTO14522 1441 aa20.7■□□□□ 0.9
SMG5-201ENST00000361813 EPS15P42566 896 aa20.7■□□□□ 0.9
SMG5-201ENST00000361813 BCL2L12Q9HB09 334 aa20.7■□□□□ 0.9
SMG5-201ENST00000361813 TDO2P48775 406 aa20.7■□□□□ 0.9
SMG5-201ENST00000361813 KIAA1328Q86T90 577 aa20.7■□□□□ 0.9
SMG5-201ENST00000361813 CCDC12Q8WUD4 166 aaPredicted RBP20.7■□□□□ 0.9
SMG5-201ENST00000361813 STIM1Q13586 685 aa20.7■□□□□ 0.9
SMG5-201ENST00000361813 MRPS27Q92552 414 aaKnown RBP20.7■□□□□ 0.9
SMG5-201ENST00000361813 SNRKQ9NRH2 765 aa20.7■□□□□ 0.9
SMG5-201ENST00000361813 A0A087WZG4 1122 aa20.69■□□□□ 0.9
SMG5-201ENST00000361813 UBAC1Q9BSL1 405 aa20.69■□□□□ 0.9
SMG5-201ENST00000361813 HYPKQ9NX55 129 aa20.69■□□□□ 0.9
SMG5-201ENST00000361813 EIF5P55010 431 aaKnown RBP20.69■□□□□ 0.9
SMG5-201ENST00000361813 SYT10Q6XYQ8 523 aa20.69■□□□□ 0.9
SMG5-201ENST00000361813 SNX14Q9Y5W7 946 aa20.69■□□□□ 0.9
SMG5-201ENST00000361813 CD109Q6YHK3 1445 aa20.68■□□□□ 0.9
SMG5-201ENST00000361813 ZC3H6P61129 1189 aaKnown RBP20.68■□□□□ 0.9
SMG5-201ENST00000361813 RUFY3Q7L099 469 aa20.68■□□□□ 0.9
SMG5-201ENST00000361813 ZNF213O14771 459 aa20.68■□□□□ 0.9
SMG5-201ENST00000361813 KIF6Q6ZMV9 814 aa20.68■□□□□ 0.9
SMG5-201ENST00000361813 CCDC148Q8NFR7 591 aa20.68■□□□□ 0.9
SMG5-201ENST00000361813 RAI14Q9P0K7 980 aa20.68■□□□□ 0.9
SMG5-201ENST00000361813 ARFGAP3Q9NP61 516 aa20.68■□□□□ 0.9
SMG5-201ENST00000361813 PALD1Q9ULE6 856 aa20.68■□□□□ 0.9
SMG5-201ENST00000361813 SAMD9Q5K651 1589 aa20.67■□□□□ 0.9
SMG5-201ENST00000361813 UBE3BQ7Z3V4 1068 aa20.67■□□□□ 0.9
SMG5-201ENST00000361813 WASF1Q92558 559 aa20.67■□□□□ 0.9
SMG5-201ENST00000361813 PNMA6EA0A0J9YXQ4 647 aa20.67■□□□□ 0.9
SMG5-201ENST00000361813 CCDC144CPQ8IYA2 1237 aa20.67■□□□□ 0.9
SMG5-201ENST00000361813 AIDAQ96BJ3 306 aa20.67■□□□□ 0.9
SMG5-201ENST00000361813 KIF20AO95235 890 aa20.66■□□□□ 0.9
SMG5-201ENST00000361813 MCM6Q14566 821 aa20.66■□□□□ 0.9
SMG5-201ENST00000361813 ATP5J2-PTCD1G3V325 749 aa20.66■□□□□ 0.9
SMG5-201ENST00000361813 PTCD1O75127 700 aaKnown RBP20.66■□□□□ 0.9
SMG5-201ENST00000361813 SYKP43405 635 aa20.66■□□□□ 0.9
SMG5-201ENST00000361813 GTF3C6Q969F1 213 aa20.66■□□□□ 0.9
SMG5-201ENST00000361813 CCDC102BQ68D86 513 aa20.66■□□□□ 0.9
SMG5-201ENST00000361813 DISP1Q96F81 1524 aa20.66■□□□□ 0.9
SMG5-201ENST00000361813 CBX8Q9HC52 389 aa20.66■□□□□ 0.9
SMG5-201ENST00000361813 NCKAP5LQ9HCH0 1330 aa20.65■□□□□ 0.9
SMG5-201ENST00000361813 PHAXQ9H814 394 aaKnown RBP20.65■□□□□ 0.9
SMG5-201ENST00000361813 IFNKQ9P0W0 207 aa20.65■□□□□ 0.9
SMG5-201ENST00000361813 G3V3G9 751 aa20.65■□□□□ 0.9
SMG5-201ENST00000361813 DCAF8Q5TAQ9 597 aa20.65■□□□□ 0.9
SMG5-201ENST00000361813 NCBP3Q53F19 620 aaKnown RBP20.65■□□□□ 0.9
SMG5-201ENST00000361813 SGSM2O43147 1006 aa20.65■□□□□ 0.9
SMG5-201ENST00000361813 MARCKSP29966 332 aaPredicted RBP20.65■□□□□ 0.9
SMG5-201ENST00000361813 GOLGA6L9A6NEM1 432 aa20.64■□□□□ 0.9
SMG5-201ENST00000361813 GOLGA6L10A6NI86 522 aa20.64■□□□□ 0.9
SMG5-201ENST00000361813 MICU3Q86XE3 530 aa20.64■□□□□ 0.9
SMG5-201ENST00000361813 TTC41PQ6P2S7 1318 aa20.64■□□□□ 0.89
SMG5-201ENST00000361813 IL13P35225 146 aa20.64■□□□□ 0.89
SMG5-201ENST00000361813 CDK5RAP3Q96JB5 506 aa20.64■□□□□ 0.89
SMG5-201ENST00000361813 TANGO6Q9C0B7 1094 aa20.64■□□□□ 0.89
SMG5-201ENST00000361813 CEP131Q9UPN4 1083 aa20.64■□□□□ 0.89
SMG5-201ENST00000361813 RNF216Q9NWF9 866 aaPredicted RBP20.63■□□□□ 0.89
SMG5-201ENST00000361813 KLF18A0A0U1RQI7 1052 aa20.63■□□□□ 0.89
SMG5-201ENST00000361813 METTL24Q5JXM2 366 aa20.63■□□□□ 0.89
SMG5-201ENST00000361813 NUP88Q99567 741 aaPredicted RBP20.63■□□□□ 0.89
SMG5-201ENST00000361813 ABCC4O15439 1325 aa20.63■□□□□ 0.89
SMG5-201ENST00000361813 HSP90AB3PQ58FF7 597 aa20.63■□□□□ 0.89
SMG5-201ENST00000361813 CHST3Q7LGC8 479 aa20.63■□□□□ 0.89
SMG5-201ENST00000361813 KCNG4Q8TDN1 519 aa20.63■□□□□ 0.89
SMG5-201ENST00000361813 PPIP5K1Q6PFW1 1433 aa20.62■□□□□ 0.89
SMG5-201ENST00000361813 ZNF75DP51815 510 aa20.62■□□□□ 0.89
SMG5-201ENST00000361813 IQCEQ6IPM2 695 aa20.62■□□□□ 0.89
SMG5-201ENST00000361813 CHL1O00533 1208 aa20.62■□□□□ 0.89
SMG5-201ENST00000361813 ATF3P18847 181 aa20.62■□□□□ 0.89
SMG5-201ENST00000361813 LIG1P18858 919 aa20.62■□□□□ 0.89
SMG5-201ENST00000361813 AMOTQ4VCS5 1084 aa20.62■□□□□ 0.89
SMG5-201ENST00000361813 DHX37Q8IY37 1157 aaKnown RBP20.62■□□□□ 0.89
SMG5-201ENST00000361813 ABCC2Q92887 1545 aa20.62■□□□□ 0.89
SMG5-201ENST00000361813 IARSP41252 1262 aaKnown RBP20.61■□□□□ 0.89
SMG5-201ENST00000361813 THEMISQ8N1K5 641 aaPredicted RBP20.61■□□□□ 0.89
SMG5-201ENST00000361813 TXLNBQ8N3L3 684 aa20.61■□□□□ 0.89
SMG5-201ENST00000361813 GOLGA8AA7E2F4 631 aa20.61■□□□□ 0.89
SMG5-201ENST00000361813 MAP9Q49MG5 647 aa20.61■□□□□ 0.89
SMG5-201ENST00000361813 SMARCC1Q92922 1105 aaPredicted RBP20.61■□□□□ 0.89
SMG5-201ENST00000361813 USP8P40818 1118 aa20.61■□□□□ 0.89
SMG5-201ENST00000361813 CWF19L2Q2TBE0 894 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 481.5 ms