RNA–Protein interactions for RNA: ENST00000361672.6

MSL3-203, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-203ENST00000361672 PRAMEF22A3QJZ6 481 aa11.15□□□□□ -0.62
MSL3-203ENST00000361672 TMEM88BA6NKF7 163 aa11.15□□□□□ -0.62
MSL3-203ENST00000361672 C21orf2O43822 256 aa11.15□□□□□ -0.62
MSL3-203ENST00000361672 VEGFBP49765 207 aa11.15□□□□□ -0.62
MSL3-203ENST00000361672 DCTN1Q14203 1278 aa11.15□□□□□ -0.62
MSL3-203ENST00000361672 NCBP3Q53F19 620 aaKnown RBP11.15□□□□□ -0.62
MSL3-203ENST00000361672 GIGYF2Q6Y7W6 1299 aaKnown RBP11.15□□□□□ -0.62
MSL3-203ENST00000361672 TMPOP42166 694 aaKnown RBP11.14□□□□□ -0.63
MSL3-203ENST00000361672 ERFEQ4G0M1 354 aa11.14□□□□□ -0.63
MSL3-203ENST00000361672 PRPF38BQ5VTL8 546 aaKnown RBP11.14□□□□□ -0.63
MSL3-203ENST00000361672 PPP1R42Q7Z4L9 355 aa11.14□□□□□ -0.63
MSL3-203ENST00000361672 TRPM7Q96QT4 1865 aa11.13□□□□□ -0.63
MSL3-203ENST00000361672 NPHP1O15259 732 aa11.13□□□□□ -0.63
MSL3-203ENST00000361672 CA12O43570 354 aa11.13□□□□□ -0.63
MSL3-203ENST00000361672 RUNDC1Q96C34 613 aa11.13□□□□□ -0.63
MSL3-203ENST00000361672 ZNF330Q9Y3S2 320 aaPredicted RBP11.13□□□□□ -0.63
MSL3-203ENST00000361672 ABCC12Q96J65 1359 aa11.13□□□□□ -0.63
MSL3-203ENST00000361672 FZD9O00144 591 aa11.12□□□□□ -0.63
MSL3-203ENST00000361672 NTSR2O95665 410 aa11.12□□□□□ -0.63
MSL3-203ENST00000361672 HLFQ16534 295 aa11.12□□□□□ -0.63
MSL3-203ENST00000361672 TMC4Q7Z404 712 aa11.12□□□□□ -0.63
MSL3-203ENST00000361672 TSPYL4Q9UJ04 414 aa11.12□□□□□ -0.63
MSL3-203ENST00000361672 CHL1O00533 1208 aa11.12□□□□□ -0.63
MSL3-203ENST00000361672 PDIA6Q15084 440 aa11.12□□□□□ -0.63
MSL3-203ENST00000361672 RBM17Q96I25 401 aaKnown RBP11.12□□□□□ -0.63
MSL3-203ENST00000361672 CHMP4AQ9BY43 222 aa11.12□□□□□ -0.63
MSL3-203ENST00000361672 CCDC85CA6NKD9 419 aa11.11□□□□□ -0.63
MSL3-203ENST00000361672 RIPK4P57078 832 aa11.11□□□□□ -0.63
MSL3-203ENST00000361672 GCC1Q96CN9 775 aa11.11□□□□□ -0.63
MSL3-203ENST00000361672 UBN2Q6ZU65 1347 aa11.11□□□□□ -0.63
MSL3-203ENST00000361672 IARSP41252 1262 aaKnown RBP11.11□□□□□ -0.63
MSL3-203ENST00000361672 SUPT20HQ8NEM7 779 aa11.11□□□□□ -0.63
MSL3-203ENST00000361672 CALD1Q05682 793 aaKnown RBP11.1□□□□□ -0.63
MSL3-203ENST00000361672 DDX21Q9NR30 783 aaKnown RBP eCLIP11.1□□□□□ -0.63
MSL3-203ENST00000361672 CDHR2Q9BYE9 1310 aa11.1□□□□□ -0.63
MSL3-203ENST00000361672 RTFDC1Q9BY42 306 aaPredicted RBP11.1□□□□□ -0.63
MSL3-203ENST00000361672 WDR33Q9C0J8 1336 aaKnown RBP11.09□□□□□ -0.63
MSL3-203ENST00000361672 ECE1P42892 770 aa11.09□□□□□ -0.63
MSL3-203ENST00000361672 TTLL7Q6ZT98 887 aa11.09□□□□□ -0.63
MSL3-203ENST00000361672 PNMA8AQ86V59 439 aaPredicted RBP11.09□□□□□ -0.63
MSL3-203ENST00000361672 GPC2Q8N158 579 aa11.09□□□□□ -0.63
MSL3-203ENST00000361672 RPGRQ92834 1020 aaKnown RBP11.09□□□□□ -0.63
MSL3-203ENST00000361672 UTP14AQ9BVJ6 771 aaKnown RBP11.09□□□□□ -0.63
MSL3-203ENST00000361672 GTF2E1P29083 439 aaPredicted RBP11.09□□□□□ -0.63
MSL3-203ENST00000361672 DEFB115Q30KQ5 88 aa11.09□□□□□ -0.63
MSL3-203ENST00000361672 SUSD4Q5VX71 490 aa11.09□□□□□ -0.63
MSL3-203ENST00000361672 SYNE4Q8N205 404 aa11.09□□□□□ -0.63
MSL3-203ENST00000361672 ZNF609O15014 1411 aa11.08□□□□□ -0.64
MSL3-203ENST00000361672 ITGBL1O95965 494 aaPredicted RBP11.08□□□□□ -0.64
MSL3-203ENST00000361672 PIP4K2AP48426 406 aaPredicted RBP11.08□□□□□ -0.64
MSL3-203ENST00000361672 TAF1DQ9H5J8 278 aaPredicted RBP11.08□□□□□ -0.64
MSL3-203ENST00000361672 MIS18AQ9NYP9 233 aa11.08□□□□□ -0.64
MSL3-203ENST00000361672 DAXXQ9UER7 740 aaPredicted RBP11.08□□□□□ -0.64
MSL3-203ENST00000361672 HACL1Q9UJ83 578 aa11.08□□□□□ -0.64
MSL3-203ENST00000361672 PPEF1O14829 653 aaPredicted RBP11.07□□□□□ -0.64
MSL3-203ENST00000361672 BBOX1O75936 387 aa11.07□□□□□ -0.64
MSL3-203ENST00000361672 ZNF853P0CG23 659 aa11.07□□□□□ -0.64
MSL3-203ENST00000361672 TRIM28Q13263 835 aaKnown RBP11.07□□□□□ -0.64
MSL3-203ENST00000361672 TCIRG1Q13488 830 aa11.07□□□□□ -0.64
MSL3-203ENST00000361672 CNGB1Q14028 1251 aaPredicted RBP11.07□□□□□ -0.64
MSL3-203ENST00000361672 WDR43Q15061 677 aaKnown RBP eCLIP11.07□□□□□ -0.64
MSL3-203ENST00000361672 CFAP44Q96MT7 982 aa11.07□□□□□ -0.64
MSL3-203ENST00000361672 NLRP3Q96P20 1036 aa11.07□□□□□ -0.64
MSL3-203ENST00000361672 TRIM35Q9UPQ4 493 aa11.07□□□□□ -0.64
MSL3-203ENST00000361672 ATP6V0A2Q9Y487 856 aa11.07□□□□□ -0.64
MSL3-203ENST00000361672 UTRNP46939 3433 aa11.07□□□□□ -0.64
MSL3-203ENST00000361672 HSP90B1P14625 803 aaKnown RBP11.06□□□□□ -0.64
MSL3-203ENST00000361672 SP8Q8IXZ3 490 aa11.06□□□□□ -0.64
MSL3-203ENST00000361672 PLBD2Q8NHP8 589 aa11.06□□□□□ -0.64
MSL3-203ENST00000361672 IFT57Q9NWB7 429 aa11.06□□□□□ -0.64
MSL3-203ENST00000361672 RRP7AQ9Y3A4 280 aaKnown RBP11.06□□□□□ -0.64
MSL3-203ENST00000361672 COL4A5P29400 1685 aa11.06□□□□□ -0.64
MSL3-203ENST00000361672 MAP2K2P36507 400 aa11.06□□□□□ -0.64
MSL3-203ENST00000361672 EIF6P56537 245 aaKnown RBP11.06□□□□□ -0.64
MSL3-203ENST00000361672 NLRP10Q86W26 655 aa11.06□□□□□ -0.64
MSL3-203ENST00000361672 CCDC24Q8N4L8 307 aa11.06□□□□□ -0.64
MSL3-203ENST00000361672 JDP2Q8WYK2 163 aa11.06□□□□□ -0.64
MSL3-203ENST00000361672 THUMPD2Q9BTF0 503 aaKnown RBP11.06□□□□□ -0.64
MSL3-203ENST00000361672 ISCA1Q9BUE6 129 aa11.06□□□□□ -0.64
MSL3-203ENST00000361672 BEGAINQ9BUH8 593 aa11.06□□□□□ -0.64
MSL3-203ENST00000361672 HYPKQ9NX55 129 aa11.06□□□□□ -0.64
MSL3-203ENST00000361672 PSME4Q14997 1843 aa11.06□□□□□ -0.64
MSL3-203ENST00000361672 ZNF541Q9H0D2 1346 aa11.06□□□□□ -0.64
MSL3-203ENST00000361672 CACNA1FO60840 1977 aa11.05□□□□□ -0.64
MSL3-203ENST00000361672 DDNO94850 711 aaPredicted RBP11.05□□□□□ -0.64
MSL3-203ENST00000361672 TMX4Q9H1E5 349 aaPredicted RBP11.05□□□□□ -0.64
MSL3-203ENST00000361672 PRKRIP1Q9H875 184 aaPredicted RBP11.05□□□□□ -0.64
MSL3-203ENST00000361672 DBF4Q9UBU7 674 aaPredicted RBP11.05□□□□□ -0.64
MSL3-203ENST00000361672 DUOX1Q9NRD9 1551 aa11.05□□□□□ -0.64
MSL3-203ENST00000361672 MYL6BP14649 208 aa11.05□□□□□ -0.64
MSL3-203ENST00000361672 USP50Q70EL3 339 aaPredicted RBP11.05□□□□□ -0.64
MSL3-203ENST00000361672 MCOLN1Q9GZU1 580 aa11.05□□□□□ -0.64
MSL3-203ENST00000361672 ZBTB3Q9H5J0 574 aa11.05□□□□□ -0.64
MSL3-203ENST00000361672 SH3TC1Q8TE82 1336 aa11.04□□□□□ -0.64
MSL3-203ENST00000361672 SF3B3Q15393 1217 aaKnown RBP11.04□□□□□ -0.64
MSL3-203ENST00000361672 CCDC27Q2M243 656 aa11.04□□□□□ -0.64
MSL3-203ENST00000361672 ABCC4O15439 1325 aa11.04□□□□□ -0.64
MSL3-203ENST00000361672 EPHX2P34913 555 aa11.04□□□□□ -0.64
MSL3-203ENST00000361672 GNAI1P63096 354 aa11.04□□□□□ -0.64
MSL3-203ENST00000361672 GRAPQ13588 217 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms