RNA–Protein interactions for RNA: ENST00000361530.10

CNKSR1-201, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-201ENST00000361530 G3BP1Q13283 466 aaKnown RBP eCLIP18.63■□□□□ 0.57
CNKSR1-201ENST00000361530 ME3Q16798 604 aa18.63■□□□□ 0.57
CNKSR1-201ENST00000361530 NECAB1Q8N987 351 aa18.63■□□□□ 0.57
CNKSR1-201ENST00000361530 MTMR6Q9Y217 621 aa18.63■□□□□ 0.57
CNKSR1-201ENST00000361530 OVOS2A0A0G2JMS6 1433 aa18.63■□□□□ 0.57
CNKSR1-201ENST00000361530 CREB3L3Q68CJ9 461 aa18.63■□□□□ 0.57
CNKSR1-201ENST00000361530 CCDC39Q9UFE4 941 aa18.63■□□□□ 0.57
CNKSR1-201ENST00000361530 CCDC183Q5T5S1 534 aa18.62■□□□□ 0.57
CNKSR1-201ENST00000361530 MAP4K1Q92918 833 aa18.62■□□□□ 0.57
CNKSR1-201ENST00000361530 BOLA2Q9H3K6 86 aa18.62■□□□□ 0.57
CNKSR1-201ENST00000361530 HDAC5Q9UQL6 1122 aa18.62■□□□□ 0.57
CNKSR1-201ENST00000361530 UBE2HP62256 183 aa18.62■□□□□ 0.57
CNKSR1-201ENST00000361530 DNM1Q05193 864 aaKnown RBP18.62■□□□□ 0.57
CNKSR1-201ENST00000361530 FAM13BQ9NYF5 915 aa18.62■□□□□ 0.57
CNKSR1-201ENST00000361530 SLIT3O75094 1523 aa18.62■□□□□ 0.57
CNKSR1-201ENST00000361530 DDX58O95786 925 aaKnown RBP18.61■□□□□ 0.57
CNKSR1-201ENST00000361530 MYL6BP14649 208 aa18.61■□□□□ 0.57
CNKSR1-201ENST00000361530 TPCN1Q9ULQ1 816 aa18.61■□□□□ 0.57
CNKSR1-201ENST00000361530 TAF6LQ9Y6J9 622 aa18.61■□□□□ 0.57
CNKSR1-201ENST00000361530 A0A0D9SFI3 127 aa18.61■□□□□ 0.57
CNKSR1-201ENST00000361530 EPHA10Q5JZY3 1008 aa18.61■□□□□ 0.57
CNKSR1-201ENST00000361530 RIC3Q7Z5B4 369 aa18.61■□□□□ 0.57
CNKSR1-201ENST00000361530 ZKSCAN1P17029 563 aaPredicted RBP18.6■□□□□ 0.57
CNKSR1-201ENST00000361530 KCNJ4P48050 445 aa18.6■□□□□ 0.57
CNKSR1-201ENST00000361530 ZNF790Q6PG37 636 aa18.6■□□□□ 0.57
CNKSR1-201ENST00000361530 ZSCAN31Q96LW9 406 aaPredicted RBP18.6■□□□□ 0.57
CNKSR1-201ENST00000361530 ZC3H6P61129 1189 aaKnown RBP18.6■□□□□ 0.57
CNKSR1-201ENST00000361530 MPNDQ8N594 471 aa18.6■□□□□ 0.57
CNKSR1-201ENST00000361530 SH2B1Q9NRF2 756 aaPredicted RBP18.6■□□□□ 0.57
CNKSR1-201ENST00000361530 SLC27A2O14975 620 aa18.59■□□□□ 0.57
CNKSR1-201ENST00000361530 KRT28Q7Z3Y7 464 aa18.59■□□□□ 0.57
CNKSR1-201ENST00000361530 JARID2Q92833 1246 aaPredicted RBP18.59■□□□□ 0.57
CNKSR1-201ENST00000361530 TCEANC2Q96MN5 208 aa18.59■□□□□ 0.57
CNKSR1-201ENST00000361530 MCM5P33992 734 aa18.59■□□□□ 0.57
CNKSR1-201ENST00000361530 ATP6V1DQ9Y5K8 247 aa18.59■□□□□ 0.57
CNKSR1-201ENST00000361530 SIPA1L3O60292 1781 aaPredicted RBP18.59■□□□□ 0.57
CNKSR1-201ENST00000361530 NEURL1BA8MQ27 555 aa18.58■□□□□ 0.57
CNKSR1-201ENST00000361530 HCLS1P14317 486 aaPredicted RBP18.58■□□□□ 0.57
CNKSR1-201ENST00000361530 NFATC2IPQ8NCF5 419 aa18.58■□□□□ 0.57
CNKSR1-201ENST00000361530 XAGE3Q8WTP9 111 aa18.58■□□□□ 0.57
CNKSR1-201ENST00000361530 EDC3Q96F86 508 aaKnown RBP18.58■□□□□ 0.57
CNKSR1-201ENST00000361530 VPS37CA5D8V6 355 aaPredicted RBP18.58■□□□□ 0.56
CNKSR1-201ENST00000361530 ERBB3P21860 1342 aa18.58■□□□□ 0.56
CNKSR1-201ENST00000361530 LARP1Q6PKG0 1096 aaKnown RBP18.58■□□□□ 0.56
CNKSR1-201ENST00000361530 COPS6Q7L5N1 327 aa18.58■□□□□ 0.56
CNKSR1-201ENST00000361530 FSD1Q9BTV5 496 aa18.58■□□□□ 0.56
CNKSR1-201ENST00000361530 SNRKQ9NRH2 765 aa18.58■□□□□ 0.56
CNKSR1-201ENST00000361530 USP25Q9UHP3 1055 aa18.58■□□□□ 0.56
CNKSR1-201ENST00000361530 PTMAP06454 111 aaKnown RBP18.57■□□□□ 0.56
CNKSR1-201ENST00000361530 PIP4K2AP48426 406 aaPredicted RBP18.57■□□□□ 0.56
CNKSR1-201ENST00000361530 GCKRQ14397 625 aa18.57■□□□□ 0.56
CNKSR1-201ENST00000361530 GIMAP6Q6P9H5 292 aa18.57■□□□□ 0.56
CNKSR1-201ENST00000361530 FAM184AQ8NB25 1140 aa18.57■□□□□ 0.56
CNKSR1-201ENST00000361530 MYD88Q99836 296 aa18.57■□□□□ 0.56
CNKSR1-201ENST00000361530 HIP1O00291 1037 aa18.56■□□□□ 0.56
CNKSR1-201ENST00000361530 ZNF589Q86UQ0 364 aaPredicted RBP18.56■□□□□ 0.56
CNKSR1-201ENST00000361530 SLC52A2Q9HAB3 445 aa18.56■□□□□ 0.56
CNKSR1-201ENST00000361530 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.56■□□□□ 0.56
CNKSR1-201ENST00000361530 UVSSAQ2YD98 709 aa18.56■□□□□ 0.56
CNKSR1-201ENST00000361530 NPHP4O75161 1426 aaPredicted RBP18.56■□□□□ 0.56
CNKSR1-201ENST00000361530 ZNF496Q96IT1 587 aaPredicted RBP18.55■□□□□ 0.56
CNKSR1-201ENST00000361530 RGPD5Q99666 1765 aa18.55■□□□□ 0.56
CNKSR1-201ENST00000361530 KDM6AO15550 1401 aaPredicted RBP18.55■□□□□ 0.56
CNKSR1-201ENST00000361530 NPHP3Q7Z494 1330 aa18.55■□□□□ 0.56
CNKSR1-201ENST00000361530 UQCRHLA0A096LP55 91 aa18.55■□□□□ 0.56
CNKSR1-201ENST00000361530 UQCRHP07919 91 aa18.55■□□□□ 0.56
CNKSR1-201ENST00000361530 NEXNQ0ZGT2 675 aa18.55■□□□□ 0.56
CNKSR1-201ENST00000361530 FAM173BQ6P4H8 233 aa18.55■□□□□ 0.56
CNKSR1-201ENST00000361530 ARID3AQ99856 593 aa18.55■□□□□ 0.56
CNKSR1-201ENST00000361530 FUCA2Q9BTY2 467 aa18.55■□□□□ 0.56
CNKSR1-201ENST00000361530 NLRP2Q9NX02 1062 aa18.55■□□□□ 0.56
CNKSR1-201ENST00000361530 CAMTA1Q9Y6Y1 1673 aa18.55■□□□□ 0.56
CNKSR1-201ENST00000361530 LETM1O95202 739 aaPredicted RBP18.54■□□□□ 0.56
CNKSR1-201ENST00000361530 LARP1BQ659C4 914 aaKnown RBP18.54■□□□□ 0.56
CNKSR1-201ENST00000361530 FERMT3Q86UX7 667 aa18.54■□□□□ 0.56
CNKSR1-201ENST00000361530 RAPGEF4Q8WZA2 1011 aa18.54■□□□□ 0.56
CNKSR1-201ENST00000361530 ZNF830Q96NB3 372 aaPredicted RBP18.54■□□□□ 0.56
CNKSR1-201ENST00000361530 METTL22Q9BUU2 404 aaPredicted RBP18.54■□□□□ 0.56
CNKSR1-201ENST00000361530 USP16Q9Y5T5 823 aa18.54■□□□□ 0.56
CNKSR1-201ENST00000361530 MED23Q9ULK4 1368 aa18.54■□□□□ 0.56
CNKSR1-201ENST00000361530 ADAMTS7Q9UKP4 1686 aa18.54■□□□□ 0.56
CNKSR1-201ENST00000361530 TERF1P54274 439 aa18.54■□□□□ 0.56
CNKSR1-201ENST00000361530 NDUFB9Q9Y6M9 179 aa18.54■□□□□ 0.56
CNKSR1-201ENST00000361530 ADCY5O95622 1261 aa18.53■□□□□ 0.56
CNKSR1-201ENST00000361530 CHGBP05060 677 aa18.53■□□□□ 0.56
CNKSR1-201ENST00000361530 PSMA5P28066 241 aa18.53■□□□□ 0.56
CNKSR1-201ENST00000361530 CDC37L1Q7L3B6 337 aa18.53■□□□□ 0.56
CNKSR1-201ENST00000361530 PHKG2P15735 406 aa18.53■□□□□ 0.56
CNKSR1-201ENST00000361530 BLOC1S2Q6QNY1 142 aa18.53■□□□□ 0.56
CNKSR1-201ENST00000361530 LRP10Q7Z4F1 713 aa18.53■□□□□ 0.56
CNKSR1-201ENST00000361530 C5P01031 1676 aa18.53■□□□□ 0.56
CNKSR1-201ENST00000361530 RPS6KB1P23443 525 aa18.53■□□□□ 0.56
CNKSR1-201ENST00000361530 TOB2Q14106 344 aaPredicted RBP18.53■□□□□ 0.56
CNKSR1-201ENST00000361530 DBNLQ9UJU6 430 aaKnown RBP18.53■□□□□ 0.56
CNKSR1-201ENST00000361530 TAF5LO75529 589 aa18.52■□□□□ 0.56
CNKSR1-201ENST00000361530 ANKRD13DQ6ZTN6 518 aa18.52■□□□□ 0.56
CNKSR1-201ENST00000361530 TTC6Q86TZ1 520 aa18.52■□□□□ 0.56
CNKSR1-201ENST00000361530 TRPM3Q9HCF6 1732 aaPredicted RBP18.52■□□□□ 0.55
CNKSR1-201ENST00000361530 COL15A1P39059 1388 aa18.52■□□□□ 0.55
CNKSR1-201ENST00000361530 RFX5P48382 616 aaPredicted RBP18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms