RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 DDX21Q9NR30 783 aaKnown RBP eCLIP19.42■□□□□ 0.7
IFT140-201ENST00000361339 TRPM3Q9HCF6 1732 aaPredicted RBP19.42■□□□□ 0.7
IFT140-201ENST00000361339 ADAMTSL3P82987 1691 aa19.42■□□□□ 0.7
IFT140-201ENST00000361339 BRD1O95696 1058 aa19.42■□□□□ 0.7
IFT140-201ENST00000361339 PHKG2P15735 406 aa19.42■□□□□ 0.7
IFT140-201ENST00000361339 ATP2B3Q16720 1220 aa19.42■□□□□ 0.7
IFT140-201ENST00000361339 SLC52A2Q9HAB3 445 aa19.42■□□□□ 0.7
IFT140-201ENST00000361339 CYP27B1O15528 508 aa19.41■□□□□ 0.7
IFT140-201ENST00000361339 IFIT2P09913 472 aaKnown RBP19.41■□□□□ 0.7
IFT140-201ENST00000361339 AK2P54819 239 aa19.41■□□□□ 0.7
IFT140-201ENST00000361339 ANAPC15P60006 121 aa19.41■□□□□ 0.7
IFT140-201ENST00000361339 MTX1Q13505 466 aa19.41■□□□□ 0.7
IFT140-201ENST00000361339 ZNF710Q8N1W2 664 aa19.41■□□□□ 0.7
IFT140-201ENST00000361339 ATP5J2-PTCD1G3V325 749 aa19.41■□□□□ 0.7
IFT140-201ENST00000361339 PTCD1O75127 700 aaKnown RBP19.41■□□□□ 0.7
IFT140-201ENST00000361339 LINS1Q8NG48 757 aa19.41■□□□□ 0.7
IFT140-201ENST00000361339 PHRF1Q9P1Y6 1649 aaKnown RBP19.41■□□□□ 0.7
IFT140-201ENST00000361339 ALDH1L1O75891 902 aa19.41■□□□□ 0.7
IFT140-201ENST00000361339 DMTNQ08495 405 aa19.41■□□□□ 0.7
IFT140-201ENST00000361339 PRPF40BQ6NWY9 871 aaKnown RBP19.41■□□□□ 0.7
IFT140-201ENST00000361339 RUFY3Q7L099 469 aa19.41■□□□□ 0.7
IFT140-201ENST00000361339 BOLA2Q9H3K6 86 aa19.41■□□□□ 0.7
IFT140-201ENST00000361339 HYPKQ9NX55 129 aa19.41■□□□□ 0.7
IFT140-201ENST00000361339 CCDC9Q9Y3X0 531 aaKnown RBP19.41■□□□□ 0.7
IFT140-201ENST00000361339 TAF6LQ9Y6J9 622 aa19.41■□□□□ 0.7
IFT140-201ENST00000361339 GADD45BO75293 160 aaPredicted RBP19.4■□□□□ 0.7
IFT140-201ENST00000361339 TSPY26PQ9H489 355 aa19.4■□□□□ 0.7
IFT140-201ENST00000361339 DIAPH3Q9NSV4 1193 aa19.4■□□□□ 0.7
IFT140-201ENST00000361339 ECHDC1Q9NTX5 307 aa19.4■□□□□ 0.7
IFT140-201ENST00000361339 TMEM94Q12767 1356 aa19.4■□□□□ 0.7
IFT140-201ENST00000361339 GLRX3O76003 335 aaKnown RBP19.39■□□□□ 0.7
IFT140-201ENST00000361339 TCEANC2Q96MN5 208 aa19.39■□□□□ 0.7
IFT140-201ENST00000361339 CASTP20810 708 aaKnown RBP19.39■□□□□ 0.69
IFT140-201ENST00000361339 HSPA2P54652 639 aa19.39■□□□□ 0.69
IFT140-201ENST00000361339 ATF3P18847 181 aa19.38■□□□□ 0.69
IFT140-201ENST00000361339 NEURL1BA8MQ27 555 aa19.38■□□□□ 0.69
IFT140-201ENST00000361339 MYRIPQ8NFW9 859 aa19.38■□□□□ 0.69
IFT140-201ENST00000361339 TTC14Q96N46 770 aa19.38■□□□□ 0.69
IFT140-201ENST00000361339 TATP17735 454 aaPredicted RBP19.38■□□□□ 0.69
IFT140-201ENST00000361339 NOLC1Q14978 699 aaKnown RBP eCLIP19.38■□□□□ 0.69
IFT140-201ENST00000361339 HSP90AB4PQ58FF6 505 aa19.37■□□□□ 0.69
IFT140-201ENST00000361339 C5P01031 1676 aa19.37■□□□□ 0.69
IFT140-201ENST00000361339 USP42Q9H9J4 1324 aaKnown RBP19.36■□□□□ 0.69
IFT140-201ENST00000361339 RPAP1Q9BWH6 1393 aaPredicted RBP19.36■□□□□ 0.69
IFT140-201ENST00000361339 MCM5P33992 734 aa19.36■□□□□ 0.69
IFT140-201ENST00000361339 MCM2P49736 904 aa19.36■□□□□ 0.69
IFT140-201ENST00000361339 NMIQ13287 307 aaPredicted RBP19.36■□□□□ 0.69
IFT140-201ENST00000361339 GCKRQ14397 625 aa19.36■□□□□ 0.69
IFT140-201ENST00000361339 JAKMIP1Q96N16 626 aaKnown RBP19.36■□□□□ 0.69
IFT140-201ENST00000361339 A0A0D9SFI3 127 aa19.35■□□□□ 0.69
IFT140-201ENST00000361339 G3BP1Q13283 466 aaKnown RBP eCLIP19.35■□□□□ 0.69
IFT140-201ENST00000361339 LRP10Q7Z4F1 713 aa19.35■□□□□ 0.69
IFT140-201ENST00000361339 TTC41PQ6P2S7 1318 aa19.35■□□□□ 0.69
IFT140-201ENST00000361339 MST1RQ04912 1400 aa19.35■□□□□ 0.69
IFT140-201ENST00000361339 SIPA1L3O60292 1781 aaPredicted RBP19.35■□□□□ 0.69
IFT140-201ENST00000361339 DDX58O95786 925 aaKnown RBP19.35■□□□□ 0.69
IFT140-201ENST00000361339 UBE3BQ7Z3V4 1068 aa19.35■□□□□ 0.69
IFT140-201ENST00000361339 CCDC83Q8IWF9 413 aa19.34■□□□□ 0.69
IFT140-201ENST00000361339 NECAB1Q8N987 351 aa19.34■□□□□ 0.69
IFT140-201ENST00000361339 U2AF2P26368 475 aaKnown RBP eCLIP19.34■□□□□ 0.69
IFT140-201ENST00000361339 SPC24Q8NBT2 197 aa19.34■□□□□ 0.69
IFT140-201ENST00000361339 ST3GAL1Q11201 340 aa19.33■□□□□ 0.69
IFT140-201ENST00000361339 SLFNL1Q499Z3 407 aa19.33■□□□□ 0.69
IFT140-201ENST00000361339 IL17RAQ96F46 866 aa19.33■□□□□ 0.69
IFT140-201ENST00000361339 INTS4Q96HW7 963 aaKnown RBP19.33■□□□□ 0.69
IFT140-201ENST00000361339 KIF3AQ9Y496 699 aa19.33■□□□□ 0.69
IFT140-201ENST00000361339 ADCY5O95622 1261 aa19.33■□□□□ 0.68
IFT140-201ENST00000361339 ZNF589Q86UQ0 364 aaPredicted RBP19.33■□□□□ 0.68
IFT140-201ENST00000361339 IFNL2Q8IZJ0 200 aa19.33■□□□□ 0.68
IFT140-201ENST00000361339 BBXQ8WY36 941 aaPredicted RBP19.33■□□□□ 0.68
IFT140-201ENST00000361339 HCLS1P14317 486 aaPredicted RBP19.32■□□□□ 0.68
IFT140-201ENST00000361339 MAPK8IP2Q13387 824 aaPredicted RBP19.32■□□□□ 0.68
IFT140-201ENST00000361339 ANKRD13DQ6ZTN6 518 aa19.32■□□□□ 0.68
IFT140-201ENST00000361339 BCL2L12Q9HB09 334 aa19.32■□□□□ 0.68
IFT140-201ENST00000361339 CNPY2Q9Y2B0 182 aa19.32■□□□□ 0.68
IFT140-201ENST00000361339 CAMTA1Q9Y6Y1 1673 aa19.32■□□□□ 0.68
IFT140-201ENST00000361339 UTYO14607 1347 aa19.32■□□□□ 0.68
IFT140-201ENST00000361339 LARP1Q6PKG0 1096 aaKnown RBP19.32■□□□□ 0.68
IFT140-201ENST00000361339 USP48Q86UV5 1035 aa19.32■□□□□ 0.68
IFT140-201ENST00000361339 RBM8AQ9Y5S9 174 aaKnown RBP19.32■□□□□ 0.68
IFT140-201ENST00000361339 FGD1P98174 961 aa19.32■□□□□ 0.68
IFT140-201ENST00000361339 METTL22Q9BUU2 404 aaPredicted RBP19.32■□□□□ 0.68
IFT140-201ENST00000361339 TTC5Q8N0Z6 440 aa19.31■□□□□ 0.68
IFT140-201ENST00000361339 ALS2Q96Q42 1657 aa19.31■□□□□ 0.68
IFT140-201ENST00000361339 OVOS2A0A0G2JMS6 1433 aa19.31■□□□□ 0.68
IFT140-201ENST00000361339 TCHHQ07283 1943 aa19.31■□□□□ 0.68
IFT140-201ENST00000361339 NEXNQ0ZGT2 675 aa19.3■□□□□ 0.68
IFT140-201ENST00000361339 TFCP2Q12800 502 aa19.3■□□□□ 0.68
IFT140-201ENST00000361339 EVI5LQ96CN4 794 aa19.3■□□□□ 0.68
IFT140-201ENST00000361339 FSD1Q9BTV5 496 aa19.3■□□□□ 0.68
IFT140-201ENST00000361339 CHMP4AQ9BY43 222 aa19.3■□□□□ 0.68
IFT140-201ENST00000361339 STRCP1A6NGW2 1772 aa19.3■□□□□ 0.68
IFT140-201ENST00000361339 MBD3O95983 291 aa19.3■□□□□ 0.68
IFT140-201ENST00000361339 SYT1P21579 422 aa19.3■□□□□ 0.68
IFT140-201ENST00000361339 PDCL2Q8N4E4 241 aa19.3■□□□□ 0.68
IFT140-201ENST00000361339 LIMCH1Q9UPQ0 1083 aa19.3■□□□□ 0.68
IFT140-201ENST00000361339 CCDC171Q6TFL3 1326 aa19.3■□□□□ 0.68
IFT140-201ENST00000361339 KCNJ4P48050 445 aa19.29■□□□□ 0.68
IFT140-201ENST00000361339 ERC1Q8IUD2 1116 aa19.29■□□□□ 0.68
IFT140-201ENST00000361339 DBNLQ9UJU6 430 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms