RNA–Protein interactions for RNA: ENST00000361293.9

CHD1L-201, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2 BASIC

Gene CHD1L, Length 2,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-201ENST00000361293 KIAA1211Q6ZU35 1233 aa24.29■■□□□ 1.48
CHD1L-201ENST00000361293 RTN4Q9NQC3 1192 aaKnown RBP24.29■■□□□ 1.48
CHD1L-201ENST00000361293 RABL6Q3YEC7 729 aaPredicted RBP24.29■■□□□ 1.48
CHD1L-201ENST00000361293 COPRSQ9NQ92 184 aa24.29■■□□□ 1.48
CHD1L-201ENST00000361293 BOLA2Q9H3K6 86 aa24.28■■□□□ 1.48
CHD1L-201ENST00000361293 GOLGA6L22H0YM25 854 aa24.28■■□□□ 1.48
CHD1L-201ENST00000361293 NHSL1Q5SYE7 1610 aa24.28■■□□□ 1.48
CHD1L-201ENST00000361293 EVA1CP58658 441 aa24.27■■□□□ 1.48
CHD1L-201ENST00000361293 SKOR2Q2VWA4 1001 aaPredicted RBP24.27■■□□□ 1.48
CHD1L-201ENST00000361293 FAM227BQ96M60 508 aa24.27■■□□□ 1.48
CHD1L-201ENST00000361293 TOGARAM1Q9Y4F4 1720 aa24.27■■□□□ 1.48
CHD1L-201ENST00000361293 FOXD4L5Q5VV16 416 aaPredicted RBP24.27■■□□□ 1.48
CHD1L-201ENST00000361293 FOXD4L4Q8WXT5 416 aaPredicted RBP24.27■■□□□ 1.48
CHD1L-201ENST00000361293 ERBB4Q15303 1308 aa24.27■■□□□ 1.47
CHD1L-201ENST00000361293 NUP188Q5SRE5 1749 aa24.26■■□□□ 1.47
CHD1L-201ENST00000361293 PTMSP20962 102 aa24.26■■□□□ 1.47
CHD1L-201ENST00000361293 RUFY2Q8WXA3 655 aa24.26■■□□□ 1.47
CHD1L-201ENST00000361293 PANK2Q9BZ23 570 aa24.26■■□□□ 1.47
CHD1L-201ENST00000361293 COL15A1P39059 1388 aa24.26■■□□□ 1.47
CHD1L-201ENST00000361293 CPA1P15085 419 aa24.25■■□□□ 1.47
CHD1L-201ENST00000361293 TFCP2Q12800 502 aa24.25■■□□□ 1.47
CHD1L-201ENST00000361293 TTC14Q96N46 770 aa24.25■■□□□ 1.47
CHD1L-201ENST00000361293 TNS2Q63HR2 1409 aa24.24■■□□□ 1.47
CHD1L-201ENST00000361293 NMIQ13287 307 aaPredicted RBP24.24■■□□□ 1.47
CHD1L-201ENST00000361293 LARP6Q9BRS8 491 aaKnown RBP24.24■■□□□ 1.47
CHD1L-201ENST00000361293 ZBTB3Q9H5J0 574 aa24.24■■□□□ 1.47
CHD1L-201ENST00000361293 DBNLQ9UJU6 430 aaKnown RBP24.24■■□□□ 1.47
CHD1L-201ENST00000361293 LMBR1LQ6UX01 489 aa24.24■■□□□ 1.47
CHD1L-201ENST00000361293 GAS2L3Q86XJ1 694 aa24.24■■□□□ 1.47
CHD1L-201ENST00000361293 EDC3Q96F86 508 aaKnown RBP24.24■■□□□ 1.47
CHD1L-201ENST00000361293 INTS4Q96HW7 963 aaKnown RBP24.24■■□□□ 1.47
CHD1L-201ENST00000361293 LMBRD1Q9NUN5 540 aa24.23■■□□□ 1.47
CHD1L-201ENST00000361293 DDX49Q9Y6V7 483 aaKnown RBP24.23■■□□□ 1.47
CHD1L-201ENST00000361293 TJP1Q07157 1748 aa24.23■■□□□ 1.47
CHD1L-201ENST00000361293 A0A0D9SFI3 127 aa24.22■■□□□ 1.47
CHD1L-201ENST00000361293 FOXO4P98177 505 aa24.22■■□□□ 1.47
CHD1L-201ENST00000361293 ADCK5Q3MIX3 580 aa24.22■■□□□ 1.47
CHD1L-201ENST00000361293 TNNI3KQ59H18 835 aa24.22■■□□□ 1.47
CHD1L-201ENST00000361293 PRPF40BQ6NWY9 871 aaKnown RBP24.22■■□□□ 1.47
CHD1L-201ENST00000361293 FPGT-TNNI3KV9GXZ4 949 aa24.22■■□□□ 1.47
CHD1L-201ENST00000361293 H7C1W4 665 aa24.22■■□□□ 1.47
CHD1L-201ENST00000361293 AK2P54819 239 aa24.22■■□□□ 1.47
CHD1L-201ENST00000361293 KLHL40Q2TBA0 621 aa24.22■■□□□ 1.47
CHD1L-201ENST00000361293 CCDC171Q6TFL3 1326 aa24.22■■□□□ 1.47
CHD1L-201ENST00000361293 FSD1Q9BTV5 496 aa24.21■■□□□ 1.47
CHD1L-201ENST00000361293 NDUFB9Q9Y6M9 179 aa24.21■■□□□ 1.47
CHD1L-201ENST00000361293 CASTP20810 708 aaKnown RBP24.21■■□□□ 1.47
CHD1L-201ENST00000361293 BRD1O95696 1058 aa24.2■■□□□ 1.46
CHD1L-201ENST00000361293 RUFY3Q7L099 469 aa24.2■■□□□ 1.46
CHD1L-201ENST00000361293 CHMP3Q9Y3E7 222 aa24.2■■□□□ 1.46
CHD1L-201ENST00000361293 CWC25Q9NXE8 425 aaPredicted RBP24.2■■□□□ 1.46
CHD1L-201ENST00000361293 BTG4Q9NY30 223 aa24.2■■□□□ 1.46
CHD1L-201ENST00000361293 NECTIN1Q15223 517 aa24.19■■□□□ 1.46
CHD1L-201ENST00000361293 GRPEL1Q9HAV7 217 aa24.19■■□□□ 1.46
CHD1L-201ENST00000361293 TMOD3Q9NYL9 352 aa24.19■■□□□ 1.46
CHD1L-201ENST00000361293 DBNDD2Q9BQY9 259 aa24.18■■□□□ 1.46
CHD1L-201ENST00000361293 RBM8AQ9Y5S9 174 aaKnown RBP24.18■■□□□ 1.46
CHD1L-201ENST00000361293 PRPF40AO75400 957 aaKnown RBP24.18■■□□□ 1.46
CHD1L-201ENST00000361293 JAKMIP1Q96N16 626 aaKnown RBP24.18■■□□□ 1.46
CHD1L-201ENST00000361293 ASAP1Q9ULH1 1129 aa24.18■■□□□ 1.46
CHD1L-201ENST00000361293 MRE11P49959 708 aa24.17■■□□□ 1.46
CHD1L-201ENST00000361293 COL9A3Q14050 684 aaPredicted RBP24.17■■□□□ 1.46
CHD1L-201ENST00000361293 KCNB2Q92953 911 aa24.17■■□□□ 1.46
CHD1L-201ENST00000361293 HIP1O00291 1037 aa24.17■■□□□ 1.46
CHD1L-201ENST00000361293 ZNF589Q86UQ0 364 aaPredicted RBP24.17■■□□□ 1.46
CHD1L-201ENST00000361293 LARGE1O95461 756 aa24.16■■□□□ 1.46
CHD1L-201ENST00000361293 CHGBP05060 677 aa24.16■■□□□ 1.46
CHD1L-201ENST00000361293 ATP5JP18859 108 aa24.16■■□□□ 1.46
CHD1L-201ENST00000361293 MAP4K1Q92918 833 aa24.16■■□□□ 1.46
CHD1L-201ENST00000361293 SNRKQ9NRH2 765 aa24.16■■□□□ 1.46
CHD1L-201ENST00000361293 ZNF330Q9Y3S2 320 aaPredicted RBP24.16■■□□□ 1.46
CHD1L-201ENST00000361293 PIGBQ92521 554 aa24.16■■□□□ 1.46
CHD1L-201ENST00000361293 MED23Q9ULK4 1368 aa24.15■■□□□ 1.46
CHD1L-201ENST00000361293 CREB3L3Q68CJ9 461 aa24.15■■□□□ 1.46
CHD1L-201ENST00000361293 ATG9AQ7Z3C6 839 aa24.15■■□□□ 1.46
CHD1L-201ENST00000361293 LIMCH1Q9UPQ0 1083 aa24.15■■□□□ 1.46
CHD1L-201ENST00000361293 CCDC9Q9Y3X0 531 aaKnown RBP24.15■■□□□ 1.46
CHD1L-201ENST00000361293 CCDC191Q8NCU4 936 aa24.14■■□□□ 1.45
CHD1L-201ENST00000361293 GPT2Q8TD30 523 aa24.14■■□□□ 1.45
CHD1L-201ENST00000361293 NCLP19338 710 aaKnown RBP24.13■■□□□ 1.45
CHD1L-201ENST00000361293 CAVIN1Q6NZI2 390 aaKnown RBP24.13■■□□□ 1.45
CHD1L-201ENST00000361293 DNAJC10Q8IXB1 793 aa24.13■■□□□ 1.45
CHD1L-201ENST00000361293 ZSWIM6Q9HCJ5 1215 aa24.13■■□□□ 1.45
CHD1L-201ENST00000361293 TAF6LQ9Y6J9 622 aa24.13■■□□□ 1.45
CHD1L-201ENST00000361293 DTNBO60941 627 aa24.13■■□□□ 1.45
CHD1L-201ENST00000361293 ZNF594Q96JF6 807 aaPredicted RBP24.13■■□□□ 1.45
CHD1L-201ENST00000361293 RPAP1Q9BWH6 1393 aaPredicted RBP24.13■■□□□ 1.45
CHD1L-201ENST00000361293 KCNJ4P48050 445 aa24.12■■□□□ 1.45
CHD1L-201ENST00000361293 DNAJC2Q99543 621 aaKnown RBP24.12■■□□□ 1.45
CHD1L-201ENST00000361293 ISY1Q9ULR0 285 aaKnown RBP24.12■■□□□ 1.45
CHD1L-201ENST00000361293 SLC27A2O14975 620 aa24.11■■□□□ 1.45
CHD1L-201ENST00000361293 FOXD4L6Q3SYB3 417 aaPredicted RBP24.11■■□□□ 1.45
CHD1L-201ENST00000361293 FOXD4L3Q6VB84 417 aaPredicted RBP24.11■■□□□ 1.45
CHD1L-201ENST00000361293 TM6SF1Q9BZW5 370 aa24.11■■□□□ 1.45
CHD1L-201ENST00000361293 ATG3Q9NT62 314 aa24.11■■□□□ 1.45
CHD1L-201ENST00000361293 PDRG1Q9NUG6 133 aa24.11■■□□□ 1.45
CHD1L-201ENST00000361293 ITGB4P16144 1822 aa24.11■■□□□ 1.45
CHD1L-201ENST00000361293 LRRC24Q50LG9 513 aa24.11■■□□□ 1.45
CHD1L-201ENST00000361293 NSFL1CQ9UNZ2 370 aaKnown RBP24.11■■□□□ 1.45
CHD1L-201ENST00000361293 VPS53Q5VIR6 699 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms