RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 RSPH14Q9UHP6 348 aa16.12■□□□□ 0.17
SMC5-201ENST00000361138 TMEM63CQ9P1W3 806 aa16.11■□□□□ 0.17
SMC5-201ENST00000361138 TCEAL9Q9UHQ7 104 aa16.11■□□□□ 0.17
SMC5-201ENST00000361138 ZRSR2Q15696 482 aaKnown RBP16.11■□□□□ 0.17
SMC5-201ENST00000361138 A2MP01023 1474 aa16.11■□□□□ 0.17
SMC5-201ENST00000361138 TATP17735 454 aaPredicted RBP16.11■□□□□ 0.17
SMC5-201ENST00000361138 ATF3P18847 181 aa16.11■□□□□ 0.17
SMC5-201ENST00000361138 LIG1P18858 919 aa16.11■□□□□ 0.17
SMC5-201ENST00000361138 LARP1Q6PKG0 1096 aaKnown RBP16.11■□□□□ 0.17
SMC5-201ENST00000361138 ANTXR1Q9H6X2 564 aa16.11■□□□□ 0.17
SMC5-201ENST00000361138 TDO2P48775 406 aa16.1■□□□□ 0.17
SMC5-201ENST00000361138 GTF3C6Q969F1 213 aa16.1■□□□□ 0.17
SMC5-201ENST00000361138 BCL2L12Q9HB09 334 aa16.1■□□□□ 0.17
SMC5-201ENST00000361138 TTC21BQ7Z4L5 1316 aa16.1■□□□□ 0.17
SMC5-201ENST00000361138 IFIT1P09914 478 aaKnown RBP16.1■□□□□ 0.17
SMC5-201ENST00000361138 SSRP1Q08945 709 aaKnown RBP16.1■□□□□ 0.17
SMC5-201ENST00000361138 GADD45BO75293 160 aaPredicted RBP16.1■□□□□ 0.17
SMC5-201ENST00000361138 KRT18P05783 430 aaKnown RBP16.1■□□□□ 0.17
SMC5-201ENST00000361138 CEP112Q8N8E3 955 aa16.1■□□□□ 0.17
SMC5-201ENST00000361138 KCNG4Q8TDN1 519 aa16.1■□□□□ 0.17
SMC5-201ENST00000361138 CABP4P57796 275 aa16.1■□□□□ 0.17
SMC5-201ENST00000361138 IRX3P78415 501 aaPredicted RBP16.1■□□□□ 0.17
SMC5-201ENST00000361138 MYD88Q99836 296 aa16.1■□□□□ 0.17
SMC5-201ENST00000361138 RTL1A6NKG5 1358 aa16.09■□□□□ 0.17
SMC5-201ENST00000361138 MSH6P52701 1360 aa16.09■□□□□ 0.17
SMC5-201ENST00000361138 CCDC102BQ68D86 513 aa16.09■□□□□ 0.17
SMC5-201ENST00000361138 RUFY3Q7L099 469 aa16.09■□□□□ 0.17
SMC5-201ENST00000361138 PHAXQ9H814 394 aaKnown RBP16.09■□□□□ 0.17
SMC5-201ENST00000361138 MCM6Q14566 821 aa16.09■□□□□ 0.17
SMC5-201ENST00000361138 TAX1BP1Q86VP1 789 aa16.09■□□□□ 0.17
SMC5-201ENST00000361138 SYCP2Q9BX26 1530 aa16.09■□□□□ 0.17
SMC5-201ENST00000361138 SYKP43405 635 aa16.09■□□□□ 0.17
SMC5-201ENST00000361138 CAPN2P17655 700 aa16.09■□□□□ 0.17
SMC5-201ENST00000361138 SYTL4Q96C24 671 aaPredicted RBP16.09■□□□□ 0.17
SMC5-201ENST00000361138 CTAGE15A4D2H0 777 aa16.09■□□□□ 0.17
SMC5-201ENST00000361138 CTAGE8P0CG41 777 aa16.09■□□□□ 0.17
SMC5-201ENST00000361138 IBSPP21815 317 aaPredicted RBP16.09■□□□□ 0.17
SMC5-201ENST00000361138 FKBP15Q5T1M5 1219 aa16.09■□□□□ 0.17
SMC5-201ENST00000361138 CTAGE6Q86UF2 777 aa16.09■□□□□ 0.17
SMC5-201ENST00000361138 CTAGE4Q8IX94 777 aa16.09■□□□□ 0.17
SMC5-201ENST00000361138 TTC31Q49AM3 519 aaPredicted RBP16.08■□□□□ 0.17
SMC5-201ENST00000361138 ESCO1Q5FWF5 840 aa16.08■□□□□ 0.17
SMC5-201ENST00000361138 AIDAQ96BJ3 306 aa16.08■□□□□ 0.17
SMC5-201ENST00000361138 MAP3K2Q9Y2U5 619 aa16.08■□□□□ 0.17
SMC5-201ENST00000361138 ZNF213O14771 459 aa16.08■□□□□ 0.16
SMC5-201ENST00000361138 USO1O60763 962 aaKnown RBP16.08■□□□□ 0.16
SMC5-201ENST00000361138 KRBA2Q6ZNG9 492 aa16.08■□□□□ 0.16
SMC5-201ENST00000361138 VPS18Q9P253 973 aa16.08■□□□□ 0.16
SMC5-201ENST00000361138 USP16Q9Y5T5 823 aa16.08■□□□□ 0.16
SMC5-201ENST00000361138 BRF1Q92994 677 aa16.08■□□□□ 0.16
SMC5-201ENST00000361138 RASSF4Q9H2L5 321 aa16.08■□□□□ 0.16
SMC5-201ENST00000361138 NPHP3Q7Z494 1330 aa16.08■□□□□ 0.16
SMC5-201ENST00000361138 WASLO00401 505 aaPredicted RBP16.08■□□□□ 0.16
SMC5-201ENST00000361138 Q6ZUG5 572 aa16.08■□□□□ 0.16
SMC5-201ENST00000361138 ORC3Q9UBD5 711 aaPredicted RBP16.08■□□□□ 0.16
SMC5-201ENST00000361138 ZNF75DP51815 510 aa16.07■□□□□ 0.16
SMC5-201ENST00000361138 MNAT1P51948 309 aa16.07■□□□□ 0.16
SMC5-201ENST00000361138 ENOX2Q16206 610 aaKnown RBP16.07■□□□□ 0.16
SMC5-201ENST00000361138 KANK3Q6NY19 840 aa16.07■□□□□ 0.16
SMC5-201ENST00000361138 TCEANC2Q96MN5 208 aa16.07■□□□□ 0.16
SMC5-201ENST00000361138 AKAP2Q9Y2D5 859 aa16.07■□□□□ 0.16
SMC5-201ENST00000361138 ADGRL2O95490 1459 aa16.07■□□□□ 0.16
SMC5-201ENST00000361138 PAFAH1B1P43034 410 aa16.07■□□□□ 0.16
SMC5-201ENST00000361138 SYCP1Q15431 976 aa16.07■□□□□ 0.16
SMC5-201ENST00000361138 SLC12A7Q9Y666 1083 aa16.07■□□□□ 0.16
SMC5-201ENST00000361138 IDH1O75874 414 aaKnown RBP16.07■□□□□ 0.16
SMC5-201ENST00000361138 DMTNQ08495 405 aa16.07■□□□□ 0.16
SMC5-201ENST00000361138 HYPKQ9NX55 129 aa16.07■□□□□ 0.16
SMC5-201ENST00000361138 DBF4Q9UBU7 674 aaPredicted RBP16.07■□□□□ 0.16
SMC5-201ENST00000361138 GOLGA8AA7E2F4 631 aa16.06■□□□□ 0.16
SMC5-201ENST00000361138 PPFIA3O75145 1194 aa16.06■□□□□ 0.16
SMC5-201ENST00000361138 THEMISQ8N1K5 641 aaPredicted RBP16.06■□□□□ 0.16
SMC5-201ENST00000361138 GPT2Q8TD30 523 aa16.06■□□□□ 0.16
SMC5-201ENST00000361138 OTUD7AQ8TE49 926 aaPredicted RBP16.06■□□□□ 0.16
SMC5-201ENST00000361138 CCDC43Q96MW1 224 aaKnown RBP16.06■□□□□ 0.16
SMC5-201ENST00000361138 GNL3LQ9NVN8 582 aaKnown RBP16.06■□□□□ 0.16
SMC5-201ENST00000361138 ABCC2Q92887 1545 aa16.06■□□□□ 0.16
SMC5-201ENST00000361138 ADGBQ8N7X0 1667 aa16.06■□□□□ 0.16
SMC5-201ENST00000361138 FBLN1P23142 703 aa16.06■□□□□ 0.16
SMC5-201ENST00000361138 IPO4Q8TEX9 1081 aaKnown RBP16.06■□□□□ 0.16
SMC5-201ENST00000361138 MEX3CQ5U5Q3 659 aaKnown RBP16.06■□□□□ 0.16
SMC5-201ENST00000361138 IFNKQ9P0W0 207 aa16.06■□□□□ 0.16
SMC5-201ENST00000361138 TTC41PQ6P2S7 1318 aa16.06■□□□□ 0.16
SMC5-201ENST00000361138 ZFYVE27Q5T4F4 411 aa16.06■□□□□ 0.16
SMC5-201ENST00000361138 CKAP4Q07065 602 aaKnown RBP16.05■□□□□ 0.16
SMC5-201ENST00000361138 NMIQ13287 307 aaPredicted RBP16.05■□□□□ 0.16
SMC5-201ENST00000361138 C10orf67Q8IYJ2 551 aa16.05■□□□□ 0.16
SMC5-201ENST00000361138 ZFYVE9O95405 1425 aa16.05■□□□□ 0.16
SMC5-201ENST00000361138 ELF2Q15723 593 aa16.05■□□□□ 0.16
SMC5-201ENST00000361138 CREB3L3Q68CJ9 461 aa16.05■□□□□ 0.16
SMC5-201ENST00000361138 EHBP1Q8NDI1 1231 aa16.05■□□□□ 0.16
SMC5-201ENST00000361138 ALS2CR12Q96Q35 445 aa16.05■□□□□ 0.16
SMC5-201ENST00000361138 CBX8Q9HC52 389 aa16.05■□□□□ 0.16
SMC5-201ENST00000361138 CCDC196A0A1B0GTZ2 297 aa16.05■□□□□ 0.16
SMC5-201ENST00000361138 PBRM1Q86U86 1689 aa16.05■□□□□ 0.16
SMC5-201ENST00000361138 KDM5BQ9UGL1 1544 aa16.05■□□□□ 0.16
SMC5-201ENST00000361138 FANCAO15360 1455 aa16.05■□□□□ 0.16
SMC5-201ENST00000361138 NBPF11Q86T75 865 aa16.05■□□□□ 0.16
SMC5-201ENST00000361138 TSC1Q92574 1164 aa16.05■□□□□ 0.16
SMC5-201ENST00000361138 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.05■□□□□ 0.161e-6■■□□□ 13.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms