RNA–Protein interactions for RNA: ENST00000360212.6

CD46-206, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-206ENST00000360212 SLC26A8Q96RN1 970 aa10.11□□□□□ -0.79
CD46-206ENST00000360212 TPCN1Q9ULQ1 816 aa10.11□□□□□ -0.79
CD46-206ENST00000360212 SURF6O75683 361 aaKnown RBP10.1□□□□□ -0.79
CD46-206ENST00000360212 MCM6Q14566 821 aa10.1□□□□□ -0.79
CD46-206ENST00000360212 CLSTN2Q9H4D0 955 aa10.1□□□□□ -0.79
CD46-206ENST00000360212 ZNF853P0CG23 659 aa10.1□□□□□ -0.79
CD46-206ENST00000360212 GPS2Q13227 327 aa10.1□□□□□ -0.79
CD46-206ENST00000360212 GRIPAP1Q4V328 841 aa10.1□□□□□ -0.79
CD46-206ENST00000360212 CTR9Q6PD62 1173 aa10.1□□□□□ -0.79
CD46-206ENST00000360212 OSBPL3Q9H4L5 887 aa10.1□□□□□ -0.79
CD46-206ENST00000360212 ARGLU1Q9NWB6 273 aaPredicted RBP10.1□□□□□ -0.79
CD46-206ENST00000360212 JAK2O60674 1132 aa10.1□□□□□ -0.79
CD46-206ENST00000360212 GUCY2CP25092 1073 aa10.1□□□□□ -0.79
CD46-206ENST00000360212 HSP90AA4PQ58FG1 418 aa10.1□□□□□ -0.79
CD46-206ENST00000360212 WWC2Q6AWC2 1192 aa10.1□□□□□ -0.79
CD46-206ENST00000360212 C14orf93Q9H972 538 aaKnown RBP10.1□□□□□ -0.79
CD46-206ENST00000360212 ADGRL1O94910 1474 aa10.09□□□□□ -0.79
CD46-206ENST00000360212 GNAI3P08754 354 aa10.09□□□□□ -0.79
CD46-206ENST00000360212 EVCP57679 992 aa10.09□□□□□ -0.79
CD46-206ENST00000360212 EFCAB2Q5VUJ9 269 aa10.09□□□□□ -0.79
CD46-206ENST00000360212 TTLL5Q6EMB2 1281 aa10.09□□□□□ -0.79
CD46-206ENST00000360212 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.09□□□□□ -0.79
CD46-206ENST00000360212 PACS2Q86VP3 889 aa10.09□□□□□ -0.79
CD46-206ENST00000360212 VPS18Q9P253 973 aa10.09□□□□□ -0.79
CD46-206ENST00000360212 ORC3Q9UBD5 711 aaPredicted RBP10.09□□□□□ -0.79
CD46-206ENST00000360212 DUOX2Q9NRD8 1548 aa10.09□□□□□ -0.79
CD46-206ENST00000360212 ADAM21Q9UKJ8 722 aa10.09□□□□□ -0.79
CD46-206ENST00000360212 CYP46A1Q9Y6A2 500 aa10.09□□□□□ -0.79
CD46-206ENST00000360212 TAF6LQ9Y6J9 622 aa10.09□□□□□ -0.79
CD46-206ENST00000360212 ABCA6Q8N139 1617 aa10.09□□□□□ -0.79
CD46-206ENST00000360212 SGSM2O43147 1006 aa10.08□□□□□ -0.8
CD46-206ENST00000360212 RAB11FIP3O75154 756 aa10.08□□□□□ -0.8
CD46-206ENST00000360212 IQCB1Q15051 598 aa10.08□□□□□ -0.8
CD46-206ENST00000360212 SLFNL1Q499Z3 407 aa10.08□□□□□ -0.8
CD46-206ENST00000360212 SRLQ86TD4 932 aa10.08□□□□□ -0.8
CD46-206ENST00000360212 PRAM1Q96QH2 718 aa10.08□□□□□ -0.8
CD46-206ENST00000360212 LSG1Q9H089 658 aaKnown RBP10.08□□□□□ -0.8
CD46-206ENST00000360212 IFNKQ9P0W0 207 aa10.08□□□□□ -0.8
CD46-206ENST00000360212 PPRC1Q5VV67 1664 aaKnown RBP10.08□□□□□ -0.8
CD46-206ENST00000360212 GUCY1B3Q02153 619 aa10.08□□□□□ -0.8
CD46-206ENST00000360212 DNAJC21Q5F1R6 531 aaKnown RBP10.08□□□□□ -0.8
CD46-206ENST00000360212 HDGFL2Q7Z4V5 671 aaPredicted RBP10.08□□□□□ -0.8
CD46-206ENST00000360212 SIL1Q9H173 461 aa10.08□□□□□ -0.8
CD46-206ENST00000360212 DDX19AQ9NUU7 478 aaKnown RBP10.08□□□□□ -0.8
CD46-206ENST00000360212 JRKLQ9Y4A0 524 aa10.08□□□□□ -0.8
CD46-206ENST00000360212 OS9Q13438 667 aaPredicted RBP10.08□□□□□ -0.8
CD46-206ENST00000360212 SULT6B1Q6IMI4 303 aa10.08□□□□□ -0.8
CD46-206ENST00000360212 LRRC2Q9BYS8 371 aa10.08□□□□□ -0.8
CD46-206ENST00000360212 RABEP2Q9H5N1 569 aa10.08□□□□□ -0.8
CD46-206ENST00000360212 LRRC7Q96NW7 1537 aa10.07□□□□□ -0.8
CD46-206ENST00000360212 CDC42BPBQ9Y5S2 1711 aa10.07□□□□□ -0.8
CD46-206ENST00000360212 ABCA8O94911 1581 aa10.07□□□□□ -0.8
CD46-206ENST00000360212 H3BQF6 201 aa10.07□□□□□ -0.8
CD46-206ENST00000360212 ZRANB2O95218 330 aaKnown RBP eCLIP10.07□□□□□ -0.82e-7■■■□□ 16.1
CD46-206ENST00000360212 TBC1D8O95759 1140 aa10.07□□□□□ -0.8
CD46-206ENST00000360212 SFPQP23246 707 aaKnown RBP eCLIP10.07□□□□□ -0.8
CD46-206ENST00000360212 ARMCX5Q6P1M9 558 aa10.07□□□□□ -0.8
CD46-206ENST00000360212 NME9Q86XW9 330 aa10.07□□□□□ -0.8
CD46-206ENST00000360212 REXO1L1PQ8IX06 675 aa10.07□□□□□ -0.8
CD46-206ENST00000360212 XPO4Q9C0E2 1151 aaKnown RBP10.07□□□□□ -0.8
CD46-206ENST00000360212 CFAP65Q6ZU64 1925 aaKnown RBP10.07□□□□□ -0.8
CD46-206ENST00000360212 SPHKAPQ2M3C7 1700 aa10.07□□□□□ -0.8
CD46-206ENST00000360212 H3BQV1 296 aa10.07□□□□□ -0.8
CD46-206ENST00000360212 FANCGO15287 622 aa10.07□□□□□ -0.8
CD46-206ENST00000360212 FOXO3O43524 673 aa10.07□□□□□ -0.8
CD46-206ENST00000360212 N4BP1O75113 896 aaKnown RBP10.07□□□□□ -0.8
CD46-206ENST00000360212 IBSPP21815 317 aaPredicted RBP10.07□□□□□ -0.8
CD46-206ENST00000360212 IFFO2Q5TF58 517 aa10.07□□□□□ -0.8
CD46-206ENST00000360212 SUGCTQ9HAC7 445 aa10.07□□□□□ -0.8
CD46-206ENST00000360212 NPHP3Q7Z494 1330 aa10.07□□□□□ -0.8
CD46-206ENST00000360212 TTC31Q49AM3 519 aaPredicted RBP10.06□□□□□ -0.8
CD46-206ENST00000360212 CCAR1Q8IX12 1150 aaKnown RBP10.06□□□□□ -0.8
CD46-206ENST00000360212 BRMS1Q9HCU9 246 aa10.06□□□□□ -0.8
CD46-206ENST00000360212 CWC15Q9P013 229 aaKnown RBP10.06□□□□□ -0.8
CD46-206ENST00000360212 GOLIM4O00461 696 aa10.06□□□□□ -0.8
CD46-206ENST00000360212 LMOD1P29536 600 aaPredicted RBP10.06□□□□□ -0.8
CD46-206ENST00000360212 SATB1Q01826 763 aa10.06□□□□□ -0.8
CD46-206ENST00000360212 CREBRFQ8IUR6 639 aa10.06□□□□□ -0.8
CD46-206ENST00000360212 DHX40Q8IX18 779 aaKnown RBP10.06□□□□□ -0.8
CD46-206ENST00000360212 AK7Q96M32 723 aa10.06□□□□□ -0.8
CD46-206ENST00000360212 UTP14AQ9BVJ6 771 aaKnown RBP10.06□□□□□ -0.8
CD46-206ENST00000360212 SCAND2PQ9GZW5 306 aaPredicted RBP10.06□□□□□ -0.8
CD46-206ENST00000360212 LEKR1Q6ZMV7 388 aa10.05□□□□□ -0.8
CD46-206ENST00000360212 NBPF11Q86T75 865 aa10.05□□□□□ -0.8
CD46-206ENST00000360212 GOLGA6L1Q8N7Z2 621 aa10.05□□□□□ -0.8
CD46-206ENST00000360212 FAM212AQ96EL1 285 aa10.05□□□□□ -0.8
CD46-206ENST00000360212 SDF4Q9BRK5 362 aa10.05□□□□□ -0.8
CD46-206ENST00000360212 SALL3Q9BXA9 1300 aa10.05□□□□□ -0.8
CD46-206ENST00000360212 TRPM2O94759 1503 aa10.05□□□□□ -0.8
CD46-206ENST00000360212 CC2D1AQ6P1N0 951 aaPredicted RBP10.05□□□□□ -0.8
CD46-206ENST00000360212 FBXO18Q8NFZ0 1043 aa10.05□□□□□ -0.8
CD46-206ENST00000360212 MRFAP1L1Q96HT8 127 aa10.05□□□□□ -0.8
CD46-206ENST00000360212 GOLPH3LQ9H4A5 285 aa10.05□□□□□ -0.8
CD46-206ENST00000360212 L2HGDHQ9H9P8 463 aa10.05□□□□□ -0.8
CD46-206ENST00000360212 PDE11AQ9HCR9 933 aa10.05□□□□□ -0.8
CD46-206ENST00000360212 SBNO2Q9Y2G9 1366 aa10.05□□□□□ -0.8
CD46-206ENST00000360212 FAM135BQ49AJ0 1406 aa10.05□□□□□ -0.8
CD46-206ENST00000360212 COL3A1P02461 1466 aaPredicted RBP10.05□□□□□ -0.8
CD46-206ENST00000360212 IRF6O14896 467 aa10.05□□□□□ -0.8
CD46-206ENST00000360212 ZRSR1Q15695 479 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms