RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 NPR1P16066 1061 aa21.92■■□□□ 1.1
FAM3D-201ENST00000358781 STK31Q9BXU1 1019 aa21.92■■□□□ 1.1
FAM3D-201ENST00000358781 RNF123Q5XPI4 1314 aa21.92■■□□□ 1.1
FAM3D-201ENST00000358781 SLX4Q8IY92 1834 aa21.92■■□□□ 1.1
FAM3D-201ENST00000358781 CACNA1SQ13698 1873 aa21.91■■□□□ 1.1
FAM3D-201ENST00000358781 ADCY9O60503 1353 aa21.91■■□□□ 1.1
FAM3D-201ENST00000358781 TCERG1O14776 1098 aaKnown RBP21.9■■□□□ 1.1
FAM3D-201ENST00000358781 VAMP4O75379 141 aa21.9■■□□□ 1.1
FAM3D-201ENST00000358781 CRY2Q49AN0 593 aa21.9■■□□□ 1.1
FAM3D-201ENST00000358781 PRPF40BQ6NWY9 871 aaKnown RBP21.9■■□□□ 1.1
FAM3D-201ENST00000358781 RIC3Q7Z5B4 369 aa21.9■■□□□ 1.1
FAM3D-201ENST00000358781 ISCA1Q9BUE6 129 aa21.9■■□□□ 1.1
FAM3D-201ENST00000358781 CACNA1FO60840 1977 aa21.9■■□□□ 1.1
FAM3D-201ENST00000358781 ATP5J2-PTCD1G3V325 749 aa21.88■■□□□ 1.09
FAM3D-201ENST00000358781 DDX58O95786 925 aaKnown RBP21.88■■□□□ 1.09
FAM3D-201ENST00000358781 TRIM28Q13263 835 aaKnown RBP21.88■■□□□ 1.09
FAM3D-201ENST00000358781 SLC10A5Q5PT55 438 aa21.88■■□□□ 1.09
FAM3D-201ENST00000358781 TRMT112Q9UI30 125 aaKnown RBP21.88■■□□□ 1.09
FAM3D-201ENST00000358781 SBF1O95248 1867 aa21.87■■□□□ 1.09
FAM3D-201ENST00000358781 C21orf2O43822 256 aa21.87■■□□□ 1.09
FAM3D-201ENST00000358781 SLC4A2P04920 1241 aa21.87■■□□□ 1.09
FAM3D-201ENST00000358781 ZNF219Q9P2Y4 722 aaPredicted RBP21.86■■□□□ 1.09
FAM3D-201ENST00000358781 SH3TC1Q8TE82 1336 aa21.86■■□□□ 1.09
FAM3D-201ENST00000358781 E9PSI1 815 aa21.85■■□□□ 1.09
FAM3D-201ENST00000358781 ALDH1B1P30837 517 aa21.85■■□□□ 1.09
FAM3D-201ENST00000358781 RASSF7Q02833 373 aa21.85■■□□□ 1.09
FAM3D-201ENST00000358781 C9orf131Q5VYM1 1079 aa21.85■■□□□ 1.09
FAM3D-201ENST00000358781 C3orf67Q6ZVT6 689 aa21.85■■□□□ 1.09
FAM3D-201ENST00000358781 G2E3Q7L622 706 aa21.85■■□□□ 1.09
FAM3D-201ENST00000358781 SYNE4Q8N205 404 aa21.85■■□□□ 1.09
FAM3D-201ENST00000358781 NLRP3Q96P20 1036 aa21.85■■□□□ 1.09
FAM3D-201ENST00000358781 FER1L6Q2WGJ9 1857 aa21.85■■□□□ 1.09
FAM3D-201ENST00000358781 HOXA10P31260 410 aaPredicted RBP21.84■■□□□ 1.09
FAM3D-201ENST00000358781 KSR2Q6VAB6 950 aa21.84■■□□□ 1.09
FAM3D-201ENST00000358781 C7orf43Q8WVR3 580 aa21.84■■□□□ 1.09
FAM3D-201ENST00000358781 RPGRQ92834 1020 aaKnown RBP21.84■■□□□ 1.09
FAM3D-201ENST00000358781 ZNF428Q96B54 188 aa21.84■■□□□ 1.09
FAM3D-201ENST00000358781 MYD88Q99836 296 aa21.84■■□□□ 1.09
FAM3D-201ENST00000358781 METTL22Q9BUU2 404 aaPredicted RBP21.84■■□□□ 1.09
FAM3D-201ENST00000358781 MAP3K2Q9Y2U5 619 aa21.84■■□□□ 1.09
FAM3D-201ENST00000358781 PI4KAP2A4QPH2 592 aa21.83■■□□□ 1.09
FAM3D-201ENST00000358781 NFKBIEO00221 500 aa21.83■■□□□ 1.09
FAM3D-201ENST00000358781 HCLS1P14317 486 aaPredicted RBP21.83■■□□□ 1.09
FAM3D-201ENST00000358781 SOGA3Q5TF21 947 aa21.83■■□□□ 1.09
FAM3D-201ENST00000358781 PI4KAP1Q8N8J0 262 aa21.83■■□□□ 1.09
FAM3D-201ENST00000358781 LAMB2P55268 1798 aa21.83■■□□□ 1.08
FAM3D-201ENST00000358781 SLFN5Q08AF3 891 aa21.82■■□□□ 1.08
FAM3D-201ENST00000358781 RBM17Q96I25 401 aaKnown RBP21.82■■□□□ 1.08
FAM3D-201ENST00000358781 RNF181Q9P0P0 153 aa21.82■■□□□ 1.08
FAM3D-201ENST00000358781 FLIIQ13045 1269 aa21.81■■□□□ 1.08
FAM3D-201ENST00000358781 CCDC191Q8NCU4 936 aa21.81■■□□□ 1.08
FAM3D-201ENST00000358781 FAM89AQ96GI7 184 aa21.81■■□□□ 1.08
FAM3D-201ENST00000358781 CRAMP1Q96RY5 1269 aa21.81■■□□□ 1.08
FAM3D-201ENST00000358781 DDX60Q8IY21 1712 aaKnown RBP21.81■■□□□ 1.08
FAM3D-201ENST00000358781 CCDC88AQ3V6T2 1871 aa21.81■■□□□ 1.08
FAM3D-201ENST00000358781 LMNB1P20700 586 aa21.8■■□□□ 1.08
FAM3D-201ENST00000358781 PRELPP51888 382 aa21.8■■□□□ 1.08
FAM3D-201ENST00000358781 LTBP3Q9NS15 1303 aa21.8■■□□□ 1.08
FAM3D-201ENST00000358781 CCDC93Q567U6 631 aa21.8■■□□□ 1.08
FAM3D-201ENST00000358781 CDCA7LQ96GN5 454 aa21.8■■□□□ 1.08
FAM3D-201ENST00000358781 CWC25Q9NXE8 425 aaPredicted RBP21.8■■□□□ 1.08
FAM3D-201ENST00000358781 ZBTB38Q8NAP3 1195 aaPredicted RBP21.79■■□□□ 1.08
FAM3D-201ENST00000358781 TAOK3Q9H2K8 898 aa21.79■■□□□ 1.08
FAM3D-201ENST00000358781 IGKV5-2P06315 115 aa21.78■■□□□ 1.08
FAM3D-201ENST00000358781 NEXNQ0ZGT2 675 aa21.78■■□□□ 1.08
FAM3D-201ENST00000358781 FKBP5Q13451 457 aaPredicted RBP21.78■■□□□ 1.08
FAM3D-201ENST00000358781 RTL5Q5HYW3 569 aaPredicted RBP21.78■■□□□ 1.08
FAM3D-201ENST00000358781 OLFM4Q6UX06 510 aa21.78■■□□□ 1.08
FAM3D-201ENST00000358781 IRS4O14654 1257 aaPredicted RBP21.77■■□□□ 1.07
FAM3D-201ENST00000358781 PCCAP05165 728 aaPredicted RBP21.77■■□□□ 1.07
FAM3D-201ENST00000358781 TRMT2AQ8IZ69 625 aaKnown RBP21.77■■□□□ 1.07
FAM3D-201ENST00000358781 ZNF526Q8TF50 670 aaPredicted RBP21.77■■□□□ 1.07
FAM3D-201ENST00000358781 ABCC4O15439 1325 aa21.76■■□□□ 1.07
FAM3D-201ENST00000358781 RTKN2Q8IZC4 609 aa21.76■■□□□ 1.07
FAM3D-201ENST00000358781 GPBP1L1Q9HC44 474 aaPredicted RBP21.76■■□□□ 1.07
FAM3D-201ENST00000358781 DICER1Q9UPY3 1922 aaKnown RBP21.75■■□□□ 1.07
FAM3D-201ENST00000358781 ZC3H4Q9UPT8 1303 aaKnown RBP21.75■■□□□ 1.07
FAM3D-201ENST00000358781 PPEF1O14829 653 aaPredicted RBP21.75■■□□□ 1.07
FAM3D-201ENST00000358781 SF3B3Q15393 1217 aaKnown RBP21.75■■□□□ 1.07
FAM3D-201ENST00000358781 CC2D2BQ6DHV5 1058 aa21.75■■□□□ 1.07
FAM3D-201ENST00000358781 DDX46Q7L014 1031 aaKnown RBP21.75■■□□□ 1.07
FAM3D-201ENST00000358781 DNAAF4Q8WXU2 420 aa21.75■■□□□ 1.07
FAM3D-201ENST00000358781 SNED1Q8TER0 1413 aa21.74■■□□□ 1.07
FAM3D-201ENST00000358781 NEURL1BA8MQ27 555 aa21.74■■□□□ 1.07
FAM3D-201ENST00000358781 HSP90B1P14625 803 aaKnown RBP21.74■■□□□ 1.07
FAM3D-201ENST00000358781 FKBP4Q02790 459 aaKnown RBP eCLIP21.74■■□□□ 1.07
FAM3D-201ENST00000358781 CWF19L2Q2TBE0 894 aaKnown RBP21.74■■□□□ 1.07
FAM3D-201ENST00000358781 TIAM2Q8IVF5 1701 aa21.74■■□□□ 1.07
FAM3D-201ENST00000358781 JARID2Q92833 1246 aaPredicted RBP21.73■■□□□ 1.07
FAM3D-201ENST00000358781 TAF1P21675 1872 aa21.72■■□□□ 1.07
FAM3D-201ENST00000358781 BBOX1O75936 387 aa21.72■■□□□ 1.07
FAM3D-201ENST00000358781 GRAPQ13588 217 aa21.72■■□□□ 1.07
FAM3D-201ENST00000358781 GRIPAP1Q4V328 841 aa21.72■■□□□ 1.07
FAM3D-201ENST00000358781 GRAPLQ8TC17 118 aaPredicted RBP21.72■■□□□ 1.07
FAM3D-201ENST00000358781 ATP6V0A2Q9Y487 856 aa21.72■■□□□ 1.07
FAM3D-201ENST00000358781 CDHR2Q9BYE9 1310 aa21.71■■□□□ 1.07
FAM3D-201ENST00000358781 SLC51AQ86UW1 340 aa21.71■■□□□ 1.07
FAM3D-201ENST00000358781 LINS1Q8NG48 757 aa21.71■■□□□ 1.07
FAM3D-201ENST00000358781 F6X3S4 739 aa21.7■■□□□ 1.06
FAM3D-201ENST00000358781 PDE8AO60658 829 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms