RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 LINS1Q8NG48 757 aa30.89■■■□□ 2.54
ALKAL1-201ENST00000358543 ARHGAP45Q92619 1136 aa30.89■■■□□ 2.54
ALKAL1-201ENST00000358543 BCAR3O75815 825 aa30.88■■■□□ 2.53
ALKAL1-201ENST00000358543 CWC25Q9NXE8 425 aaPredicted RBP30.88■■■□□ 2.53
ALKAL1-201ENST00000358543 TRMT112Q9UI30 125 aaKnown RBP30.88■■■□□ 2.53
ALKAL1-201ENST00000358543 PDZRN3Q9UPQ7 1066 aa30.88■■■□□ 2.53
ALKAL1-201ENST00000358543 PDE6BP35913 854 aa30.87■■■□□ 2.53
ALKAL1-201ENST00000358543 SLC10A5Q5PT55 438 aa30.87■■■□□ 2.53
ALKAL1-201ENST00000358543 NUTM1Q86Y26 1132 aa30.87■■■□□ 2.53
ALKAL1-201ENST00000358543 NEURL1BA8MQ27 555 aa30.86■■■□□ 2.53
ALKAL1-201ENST00000358543 ERFEQ4G0M1 354 aa30.86■■■□□ 2.53
ALKAL1-201ENST00000358543 BEND3Q5T5X7 828 aa30.86■■■□□ 2.53
ALKAL1-201ENST00000358543 CCDC24Q8N4L8 307 aa30.86■■■□□ 2.53
ALKAL1-201ENST00000358543 NLGN2Q8NFZ4 835 aa30.86■■■□□ 2.53
ALKAL1-201ENST00000358543 SH3TC1Q8TE82 1336 aa30.86■■■□□ 2.53
ALKAL1-201ENST00000358543 IPO8O15397 1037 aaKnown RBP30.85■■■□□ 2.53
ALKAL1-201ENST00000358543 API5Q9BZZ5 524 aaKnown RBP30.85■■■□□ 2.53
ALKAL1-201ENST00000358543 RIC1Q4ADV7 1423 aa30.84■■■□□ 2.53
ALKAL1-201ENST00000358543 KLRG2A4D1S0 409 aaPredicted RBP30.84■■■□□ 2.53
ALKAL1-201ENST00000358543 CWF19L2Q2TBE0 894 aaKnown RBP30.84■■■□□ 2.53
ALKAL1-201ENST00000358543 ZBTB38Q8NAP3 1195 aaPredicted RBP30.84■■■□□ 2.53
ALKAL1-201ENST00000358543 PXDNLA1KZ92 1463 aa30.82■■■□□ 2.53
ALKAL1-201ENST00000358543 PCCAP05165 728 aaPredicted RBP30.82■■■□□ 2.52
ALKAL1-201ENST00000358543 SLC4A10Q6U841 1118 aa30.82■■■□□ 2.52
ALKAL1-201ENST00000358543 ANKRD31Q8N7Z5 1873 aa30.82■■■□□ 2.52
ALKAL1-201ENST00000358543 ABCC12Q96J65 1359 aa30.81■■■□□ 2.52
ALKAL1-201ENST00000358543 ALDH1L1O75891 902 aa30.81■■■□□ 2.52
ALKAL1-201ENST00000358543 DPEP1P16444 411 aa30.81■■■□□ 2.52
ALKAL1-201ENST00000358543 GCKRQ14397 625 aa30.81■■■□□ 2.52
ALKAL1-201ENST00000358543 FAM89AQ96GI7 184 aa30.81■■■□□ 2.52
ALKAL1-201ENST00000358543 RCAN3Q9UKA8 241 aa30.81■■■□□ 2.52
ALKAL1-201ENST00000358543 A0A0G2JLW4 131 aa30.8■■■□□ 2.52
ALKAL1-201ENST00000358543 H0YIN7 160 aa30.8■■■□□ 2.52
ALKAL1-201ENST00000358543 SRCIN1Q9C0H9 1055 aa30.8■■■□□ 2.52
ALKAL1-201ENST00000358543 KIAA1551Q9HCM1 1747 aa30.8■■■□□ 2.52
ALKAL1-201ENST00000358543 KCNA3P22001 575 aa30.79■■■□□ 2.52
ALKAL1-201ENST00000358543 C2CD5Q86YS7 1000 aa30.79■■■□□ 2.52
ALKAL1-201ENST00000358543 SYNE4Q8N205 404 aa30.79■■■□□ 2.52
ALKAL1-201ENST00000358543 HSP90B1P14625 803 aaKnown RBP30.78■■■□□ 2.52
ALKAL1-201ENST00000358543 ATF7IPQ6VMQ6 1270 aa30.78■■■□□ 2.52
ALKAL1-201ENST00000358543 FRAT1Q92837 279 aaPredicted RBP30.78■■■□□ 2.52
ALKAL1-201ENST00000358543 H7C1W4 665 aa30.77■■■□□ 2.52
ALKAL1-201ENST00000358543 CHRNA5P30532 468 aa30.77■■■□□ 2.52
ALKAL1-201ENST00000358543 CRY2Q49AN0 593 aa30.77■■■□□ 2.52
ALKAL1-201ENST00000358543 ZKSCAN2Q63HK3 967 aa30.77■■■□□ 2.52
ALKAL1-201ENST00000358543 NLRP3Q96P20 1036 aa30.77■■■□□ 2.52
ALKAL1-201ENST00000358543 CDHR2Q9BYE9 1310 aa30.76■■■□□ 2.52
ALKAL1-201ENST00000358543 SRGNP10124 158 aa30.76■■■□□ 2.51
ALKAL1-201ENST00000358543 N4BP2Q86UW6 1770 aaPredicted RBP30.75■■■□□ 2.51
ALKAL1-201ENST00000358543 IRS4O14654 1257 aaPredicted RBP30.75■■■□□ 2.51
ALKAL1-201ENST00000358543 HCLS1P14317 486 aaPredicted RBP30.75■■■□□ 2.51
ALKAL1-201ENST00000358543 TRIM27P14373 513 aa30.75■■■□□ 2.51
ALKAL1-201ENST00000358543 CCT4P50991 539 aaKnown RBP30.75■■■□□ 2.51
ALKAL1-201ENST00000358543 PIM2Q9P1W9 311 aa30.75■■■□□ 2.51
ALKAL1-201ENST00000358543 RTL5Q5HYW3 569 aaPredicted RBP30.74■■■□□ 2.51
ALKAL1-201ENST00000358543 MASTLQ96GX5 879 aa30.74■■■□□ 2.51
ALKAL1-201ENST00000358543 STYK1Q6J9G0 422 aa30.73■■■□□ 2.51
ALKAL1-201ENST00000358543 ABCC4O15439 1325 aa30.73■■■□□ 2.51
ALKAL1-201ENST00000358543 NPR1P16066 1061 aa30.72■■■□□ 2.51
ALKAL1-201ENST00000358543 CASP7P55210 303 aa30.72■■■□□ 2.51
ALKAL1-201ENST00000358543 GRM8O00222 908 aa30.71■■■□□ 2.51
ALKAL1-201ENST00000358543 C3orf67Q6ZVT6 689 aa30.71■■■□□ 2.51
ALKAL1-201ENST00000358543 JARID2Q92833 1246 aaPredicted RBP30.71■■■□□ 2.51
ALKAL1-201ENST00000358543 TNRC6CQ9HCJ0 1690 aaKnown RBP30.71■■■□□ 2.51
ALKAL1-201ENST00000358543 DLEC1Q9Y238 1755 aa30.7■■■□□ 2.51
ALKAL1-201ENST00000358543 PDE8AO60658 829 aa30.7■■■□□ 2.51
ALKAL1-201ENST00000358543 HOXA10P31260 410 aaPredicted RBP30.7■■■□□ 2.51
ALKAL1-201ENST00000358543 SF3B3Q15393 1217 aaKnown RBP30.7■■■□□ 2.51
ALKAL1-201ENST00000358543 INTS3Q68E01 1043 aaKnown RBP30.7■■■□□ 2.51
ALKAL1-201ENST00000358543 UBE3BQ7Z3V4 1068 aa30.7■■■□□ 2.51
ALKAL1-201ENST00000358543 C9orf78Q9NZ63 289 aaPredicted RBP30.7■■■□□ 2.51
ALKAL1-201ENST00000358543 CNKSR1Q969H4 720 aa30.69■■■□□ 2.5
ALKAL1-201ENST00000358543 ZNF622Q969S3 477 aaKnown RBP eCLIP30.69■■■□□ 2.5
ALKAL1-201ENST00000358543 PLA2G12BQ9BX93 195 aa30.69■■■□□ 2.5
ALKAL1-201ENST00000358543 DDX60Q8IY21 1712 aaKnown RBP30.69■■■□□ 2.5
ALKAL1-201ENST00000358543 BRCA1P38398 1863 aaKnown RBP30.69■■■□□ 2.5
ALKAL1-201ENST00000358543 UTYO14607 1347 aa30.69■■■□□ 2.5
ALKAL1-201ENST00000358543 COL11A2P13942 1736 aaPredicted RBP30.68■■■□□ 2.5
ALKAL1-201ENST00000358543 DALRD3Q5D0E6 543 aaKnown RBP30.68■■■□□ 2.5
ALKAL1-201ENST00000358543 TTLL6Q8N841 843 aa30.68■■■□□ 2.5
ALKAL1-201ENST00000358543 RPGRQ92834 1020 aaKnown RBP30.67■■■□□ 2.5
ALKAL1-201ENST00000358543 LAMB2P55268 1798 aa30.66■■■□□ 2.5
ALKAL1-201ENST00000358543 ALDH1B1P30837 517 aa30.66■■■□□ 2.5
ALKAL1-201ENST00000358543 RBM17Q96I25 401 aaKnown RBP30.66■■■□□ 2.5
ALKAL1-201ENST00000358543 CRAMP1Q96RY5 1269 aa30.65■■■□□ 2.5
ALKAL1-201ENST00000358543 USP44Q9H0E7 712 aa30.65■■■□□ 2.5
ALKAL1-201ENST00000358543 TNNQ9UQP3 1299 aa30.65■■■□□ 2.5
ALKAL1-201ENST00000358543 MS4A1P11836 297 aa30.64■■■□□ 2.5
ALKAL1-201ENST00000358543 DZIP1LQ8IYY4 767 aaKnown RBP30.64■■■□□ 2.5
ALKAL1-201ENST00000358543 CLUAP1Q96AJ1 413 aa30.64■■■□□ 2.5
ALKAL1-201ENST00000358543 DCAF8L1A6NGE4 600 aa30.63■■■□□ 2.49
ALKAL1-201ENST00000358543 NBPF7P0C2Y1 421 aaPredicted RBP30.63■■■□□ 2.49
ALKAL1-201ENST00000358543 GPR162Q16538 588 aa30.63■■■□□ 2.49
ALKAL1-201ENST00000358543 FTSJ3Q8IY81 847 aaKnown RBP30.63■■■□□ 2.49
ALKAL1-201ENST00000358543 BCS1LQ9Y276 419 aa30.63■■■□□ 2.49
ALKAL1-201ENST00000358543 CTSWP56202 376 aa30.62■■■□□ 2.49
ALKAL1-201ENST00000358543 CCDC152Q4G0S7 254 aa30.62■■■□□ 2.49
ALKAL1-201ENST00000358543 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.62■■■□□ 2.49
ALKAL1-201ENST00000358543 YBX3P16989 372 aaKnown RBP eCLIP30.61■■■□□ 2.49
ALKAL1-201ENST00000358543 DDX46Q7L014 1031 aaKnown RBP30.61■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms