RNA–Protein interactions for RNA: ENST00000358273.8

NF1-202, Transcript of neurofibromin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NF1, Length 12,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-202ENST00000358273 CEP128Q6ZU80 1094 aa7.99□□□□□ -1.13
NF1-202ENST00000358273 CYP46A1Q9Y6A2 500 aa7.99□□□□□ -1.13
NF1-202ENST00000358273 RANBP1P43487 201 aa7.99□□□□□ -1.13
NF1-202ENST00000358273 MAATS1Q7Z4T9 603 aa7.99□□□□□ -1.13
NF1-202ENST00000358273 MICAL1Q8TDZ2 1067 aa7.99□□□□□ -1.13
NF1-202ENST00000358273 HGSO14964 777 aaPredicted RBP7.99□□□□□ -1.13
NF1-202ENST00000358273 NFXL1Q6ZNB6 911 aa7.99□□□□□ -1.13
NF1-202ENST00000358273 SCP2P22307 547 aa7.99□□□□□ -1.13
NF1-202ENST00000358273 IGBP1P78318 339 aa7.98□□□□□ -1.13
NF1-202ENST00000358273 PKP1Q13835 747 aa7.98□□□□□ -1.13
NF1-202ENST00000358273 UBE4AQ14139 1066 aa7.98□□□□□ -1.13
NF1-202ENST00000358273 FKBP15Q5T1M5 1219 aa7.98□□□□□ -1.13
NF1-202ENST00000358273 NUTM1Q86Y26 1132 aa7.98□□□□□ -1.13
NF1-202ENST00000358273 TMX3Q96JJ7 454 aa7.98□□□□□ -1.13
NF1-202ENST00000358273 MXRA7P84157 204 aa7.98□□□□□ -1.13
NF1-202ENST00000358273 VPS53Q5VIR6 699 aa7.98□□□□□ -1.13
NF1-202ENST00000358273 SRLQ86TD4 932 aa7.98□□□□□ -1.13
NF1-202ENST00000358273 ANKS4BQ8N8V4 417 aa7.98□□□□□ -1.13
NF1-202ENST00000358273 SEPT6Q14141 434 aa7.98□□□□□ -1.13
NF1-202ENST00000358273 FNBP4Q8N3X1 1017 aaPredicted RBP7.98□□□□□ -1.13
NF1-202ENST00000358273 AOPEPQ8N6M6 819 aa7.98□□□□□ -1.13
NF1-202ENST00000358273 GPR161Q8N6U8 529 aaKnown RBP7.98□□□□□ -1.13
NF1-202ENST00000358273 TRIP11Q15643 1979 aa7.98□□□□□ -1.13
NF1-202ENST00000358273 ZSCAN22P10073 491 aaPredicted RBP7.98□□□□□ -1.13
NF1-202ENST00000358273 TRIM27P14373 513 aa7.98□□□□□ -1.13
NF1-202ENST00000358273 LRRC43Q8N309 656 aa7.98□□□□□ -1.13
NF1-202ENST00000358273 CHAMP1Q96JM3 812 aa7.98□□□□□ -1.13
NF1-202ENST00000358273 ORC3Q9UBD5 711 aaPredicted RBP7.98□□□□□ -1.13
NF1-202ENST00000358273 GRIPAP1Q4V328 841 aa7.98□□□□□ -1.13
NF1-202ENST00000358273 ELL2O00472 640 aaPredicted RBP7.98□□□□□ -1.13
NF1-202ENST00000358273 EPB41L2O43491 1005 aaKnown RBP7.98□□□□□ -1.13
NF1-202ENST00000358273 LUC7L3O95232 432 aaKnown RBP7.98□□□□□ -1.13
NF1-202ENST00000358273 PSMA5P28066 241 aa7.98□□□□□ -1.13
NF1-202ENST00000358273 HDAC1Q13547 482 aaPredicted RBP7.98□□□□□ -1.13
NF1-202ENST00000358273 FBF1Q8TES7 1133 aa7.98□□□□□ -1.13
NF1-202ENST00000358273 ERCC6Q03468 1493 aa7.98□□□□□ -1.13
NF1-202ENST00000358273 NDUFAB1O14561 156 aa7.98□□□□□ -1.13
NF1-202ENST00000358273 MAP4K4O95819 1239 aaPredicted RBP7.98□□□□□ -1.13
NF1-202ENST00000358273 MATR3P43243 847 aaKnown RBP eCLIP7.98□□□□□ -1.131e-6■■■■■ 31.1
NF1-202ENST00000358273 PPP6R1Q9UPN7 881 aa7.98□□□□□ -1.13
NF1-202ENST00000358273 NLRP1Q9C000 1473 aa7.98□□□□□ -1.13
NF1-202ENST00000358273 SYNE3Q6ZMZ3 975 aa7.97□□□□□ -1.13
NF1-202ENST00000358273 TBC1D31Q96DN5 1066 aa7.97□□□□□ -1.13
NF1-202ENST00000358273 GNL3LQ9NVN8 582 aaKnown RBP7.97□□□□□ -1.13
NF1-202ENST00000358273 FAM71BQ8TC56 605 aa7.97□□□□□ -1.13
NF1-202ENST00000358273 ZNF428Q96B54 188 aa7.97□□□□□ -1.13
NF1-202ENST00000358273 PPP1R12AO14974 1030 aaPredicted RBP7.97□□□□□ -1.13
NF1-202ENST00000358273 KIF5BP33176 963 aa7.97□□□□□ -1.13
NF1-202ENST00000358273 TTC22Q5TAA0 569 aa7.97□□□□□ -1.13
NF1-202ENST00000358273 EGFL6Q8IUX8 553 aa7.97□□□□□ -1.13
NF1-202ENST00000358273 SYTL4Q96C24 671 aaPredicted RBP7.97□□□□□ -1.13
NF1-202ENST00000358273 SMARCA5O60264 1052 aaPredicted RBP7.97□□□□□ -1.13
NF1-202ENST00000358273 NAIF1Q69YI7 327 aaPredicted RBP7.97□□□□□ -1.13
NF1-202ENST00000358273 LARP6Q9BRS8 491 aaKnown RBP7.97□□□□□ -1.13
NF1-202ENST00000358273 EIF4E1BA6NMX2 242 aaKnown RBP7.97□□□□□ -1.13
NF1-202ENST00000358273 KIF3BO15066 747 aa7.97□□□□□ -1.13
NF1-202ENST00000358273 ABTB1Q969K4 478 aaPredicted RBP7.97□□□□□ -1.13
NF1-202ENST00000358273 STK26Q9P289 416 aa7.97□□□□□ -1.13
NF1-202ENST00000358273 ANKRD18BA2A2Z9 1011 aa7.97□□□□□ -1.13
NF1-202ENST00000358273 CCT5P48643 541 aa7.97□□□□□ -1.13
NF1-202ENST00000358273 GOLGA6CA6NDK9 693 aa7.97□□□□□ -1.13
NF1-202ENST00000358273 GOLGA6DP0CG33 693 aa7.97□□□□□ -1.13
NF1-202ENST00000358273 FAM210AQ96ND0 272 aa7.97□□□□□ -1.13
NF1-202ENST00000358273 FAM204AQ9H8W3 233 aa7.97□□□□□ -1.13
NF1-202ENST00000358273 GOLGA6AQ9NYA3 693 aa7.97□□□□□ -1.13
NF1-202ENST00000358273 PLXNC1O60486 1568 aa7.97□□□□□ -1.13
NF1-202ENST00000358273 SMIM23A6NLE4 172 aa7.97□□□□□ -1.13
NF1-202ENST00000358273 SLC8A1P32418 973 aa7.97□□□□□ -1.13
NF1-202ENST00000358273 KIF4BQ2VIQ3 1234 aa7.97□□□□□ -1.13
NF1-202ENST00000358273 BICC1Q9H694 974 aaKnown RBP7.97□□□□□ -1.13
NF1-202ENST00000358273 STAG3Q9UJ98 1225 aa7.97□□□□□ -1.13
NF1-202ENST00000358273 CTIFO43310 598 aaKnown RBP7.97□□□□□ -1.13
NF1-202ENST00000358273 CCDC175P0C221 793 aa7.97□□□□□ -1.13
NF1-202ENST00000358273 ZNF365Q70YC5 407 aa7.97□□□□□ -1.13
NF1-202ENST00000358273 USP19O94966 1318 aa7.96□□□□□ -1.13
NF1-202ENST00000358273 CNTRLQ7Z7A1 2325 aa7.96□□□□□ -1.13
NF1-202ENST00000358273 NBPF9Q3BBW0 867 aa7.96□□□□□ -1.13
NF1-202ENST00000358273 CTAGE5O15320 804 aa7.96□□□□□ -1.13
NF1-202ENST00000358273 NAA30Q147X3 362 aaPredicted RBP7.96□□□□□ -1.13
NF1-202ENST00000358273 NBPF3Q9H094 633 aa7.96□□□□□ -1.13
NF1-202ENST00000358273 ASXL1Q8IXJ9 1541 aa7.96□□□□□ -1.13
NF1-202ENST00000358273 ABCC2Q92887 1545 aa7.96□□□□□ -1.13
NF1-202ENST00000358273 LCA5Q86VQ0 697 aa7.96□□□□□ -1.14
NF1-202ENST00000358273 KIAA1524Q8TCG1 905 aa7.96□□□□□ -1.14
NF1-202ENST00000358273 ANKRD30BQ9BXX2 1392 aa7.96□□□□□ -1.14
NF1-202ENST00000358273 DISP3Q9P2K9 1392 aa7.96□□□□□ -1.14
NF1-202ENST00000358273 CD2BP2O95400 341 aaKnown RBP7.96□□□□□ -1.14
NF1-202ENST00000358273 ATRIPQ8WXE1 791 aa7.96□□□□□ -1.14
NF1-202ENST00000358273 PLEKHD1A6NEE1 506 aa7.96□□□□□ -1.14
NF1-202ENST00000358273 BIVM-ERCC5R4GMW8 1640 aa7.96□□□□□ -1.14
NF1-202ENST00000358273 OPA1O60313 960 aa7.96□□□□□ -1.14
NF1-202ENST00000358273 CTAGE15A4D2H0 777 aa7.96□□□□□ -1.14
NF1-202ENST00000358273 F13A1P00488 732 aa7.96□□□□□ -1.14
NF1-202ENST00000358273 CTAGE8P0CG41 777 aa7.96□□□□□ -1.14
NF1-202ENST00000358273 MUM1L1Q5H9M0 696 aa7.96□□□□□ -1.14
NF1-202ENST00000358273 CTAGE6Q86UF2 777 aa7.96□□□□□ -1.14
NF1-202ENST00000358273 CTAGE4Q8IX94 777 aa7.96□□□□□ -1.14
NF1-202ENST00000358273 RNF217Q8TC41 542 aa7.96□□□□□ -1.14
NF1-202ENST00000358273 SLC52A1Q9NWF4 448 aa7.96□□□□□ -1.14
NF1-202ENST00000358273 USP16Q9Y5T5 823 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms