RNA–Protein interactions for RNA: ENST00000351097.9

USP25-203, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-203ENST00000351097 JARID2Q92833 1246 aaPredicted RBP28.66■■■□□ 2.18
USP25-203ENST00000351097 AFDNP55196 1824 aaKnown RBP28.66■■■□□ 2.18
USP25-203ENST00000351097 UBE3BQ7Z3V4 1068 aa28.65■■■□□ 2.18
USP25-203ENST00000351097 ERC1Q8IUD2 1116 aa28.65■■■□□ 2.18
USP25-203ENST00000351097 LMBRD1Q9NUN5 540 aa28.65■■■□□ 2.18
USP25-203ENST00000351097 ANO2Q9NQ90 1003 aa28.65■■■□□ 2.18
USP25-203ENST00000351097 COL15A1P39059 1388 aa28.65■■■□□ 2.18
USP25-203ENST00000351097 NUP188Q5SRE5 1749 aa28.64■■■□□ 2.18
USP25-203ENST00000351097 A0A087WZG4 1122 aa28.64■■■□□ 2.18
USP25-203ENST00000351097 UNC5CLQ8IV45 518 aa28.64■■■□□ 2.18
USP25-203ENST00000351097 DNAJC10Q8IXB1 793 aa28.64■■■□□ 2.18
USP25-203ENST00000351097 TMX3Q96JJ7 454 aa28.64■■■□□ 2.18
USP25-203ENST00000351097 CDCA7Q9BWT1 371 aaPredicted RBP28.64■■■□□ 2.18
USP25-203ENST00000351097 CLASRPQ8N2M8 674 aaKnown RBP28.64■■■□□ 2.17
USP25-203ENST00000351097 TEX13AQ9BXU3 409 aaPredicted RBP28.64■■■□□ 2.17
USP25-203ENST00000351097 THRAP3Q9Y2W1 955 aaKnown RBP28.64■■■□□ 2.17
USP25-203ENST00000351097 CASP7P55210 303 aa28.63■■■□□ 2.17
USP25-203ENST00000351097 ZDHHC9Q9Y397 364 aa28.63■■■□□ 2.17
USP25-203ENST00000351097 USP42Q9H9J4 1324 aaKnown RBP28.63■■■□□ 2.17
USP25-203ENST00000351097 IL17RAQ96F46 866 aa28.62■■■□□ 2.17
USP25-203ENST00000351097 ZBTB3Q9H5J0 574 aa28.62■■■□□ 2.17
USP25-203ENST00000351097 PALD1Q9ULE6 856 aa28.62■■■□□ 2.17
USP25-203ENST00000351097 EPB41L2O43491 1005 aaKnown RBP28.62■■■□□ 2.17
USP25-203ENST00000351097 SASH1O94885 1247 aa28.61■■■□□ 2.17
USP25-203ENST00000351097 RABL6Q3YEC7 729 aaPredicted RBP28.61■■■□□ 2.17
USP25-203ENST00000351097 CLCN1P35523 988 aa28.61■■■□□ 2.17
USP25-203ENST00000351097 G3BP1Q13283 466 aaKnown RBP eCLIP28.6■■■□□ 2.17
USP25-203ENST00000351097 KLHDC4Q8TBB5 520 aa28.6■■■□□ 2.17
USP25-203ENST00000351097 ZNF445P59923 1031 aa28.6■■■□□ 2.17
USP25-203ENST00000351097 CUL4AQ13619 759 aa28.6■■■□□ 2.17
USP25-203ENST00000351097 SLIT2O94813 1529 aa28.59■■■□□ 2.17
USP25-203ENST00000351097 H7C1W4 665 aa28.59■■■□□ 2.17
USP25-203ENST00000351097 SYTL4Q96C24 671 aaPredicted RBP28.59■■■□□ 2.17
USP25-203ENST00000351097 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.59■■■□□ 2.17
USP25-203ENST00000351097 TTC41PQ6P2S7 1318 aa28.59■■■□□ 2.17
USP25-203ENST00000351097 DDB1Q16531 1140 aa28.58■■■□□ 2.17
USP25-203ENST00000351097 SLC4A9Q96Q91 983 aa28.58■■■□□ 2.17
USP25-203ENST00000351097 CWC25Q9NXE8 425 aaPredicted RBP28.58■■■□□ 2.17
USP25-203ENST00000351097 SPATA31A5Q5VU36 1347 aa28.58■■■□□ 2.17
USP25-203ENST00000351097 SPATA31A7Q8IWB4 1347 aa28.58■■■□□ 2.17
USP25-203ENST00000351097 RFX5P48382 616 aaPredicted RBP28.58■■■□□ 2.17
USP25-203ENST00000351097 SIL1Q9H173 461 aa28.58■■■□□ 2.17
USP25-203ENST00000351097 STARD3NLO95772 234 aa28.57■■■□□ 2.16
USP25-203ENST00000351097 PRIM1P49642 420 aaKnown RBP28.57■■■□□ 2.16
USP25-203ENST00000351097 UBAP1LF5GYI3 381 aa28.57■■■□□ 2.16
USP25-203ENST00000351097 CAVIN1Q6NZI2 390 aaKnown RBP28.57■■■□□ 2.16
USP25-203ENST00000351097 TRIM44Q96DX7 344 aaPredicted RBP28.57■■■□□ 2.16
USP25-203ENST00000351097 COPRSQ9NQ92 184 aa28.57■■■□□ 2.16
USP25-203ENST00000351097 MAP4K4O95819 1239 aaPredicted RBP28.56■■■□□ 2.16
USP25-203ENST00000351097 NCLP19338 710 aaKnown RBP28.56■■■□□ 2.16
USP25-203ENST00000351097 NASPP49321 788 aaPredicted RBP28.56■■■□□ 2.16
USP25-203ENST00000351097 INTS4Q96HW7 963 aaKnown RBP28.56■■■□□ 2.16
USP25-203ENST00000351097 PRPF40AO75400 957 aaKnown RBP28.55■■■□□ 2.16
USP25-203ENST00000351097 IFIT2P09913 472 aaKnown RBP28.55■■■□□ 2.16
USP25-203ENST00000351097 CCDC191Q8NCU4 936 aa28.55■■■□□ 2.16
USP25-203ENST00000351097 NWD2Q9ULI1 1742 aa28.55■■■□□ 2.16
USP25-203ENST00000351097 ZSCAN23Q3MJ62 389 aa28.55■■■□□ 2.16
USP25-203ENST00000351097 AACSQ86V21 672 aa28.55■■■□□ 2.16
USP25-203ENST00000351097 ZNF330Q9Y3S2 320 aaPredicted RBP28.55■■■□□ 2.16
USP25-203ENST00000351097 GLRX3O76003 335 aaKnown RBP28.54■■■□□ 2.16
USP25-203ENST00000351097 PTPN12Q05209 780 aaKnown RBP28.54■■■□□ 2.16
USP25-203ENST00000351097 EAF2Q96CJ1 260 aaPredicted RBP28.54■■■□□ 2.16
USP25-203ENST00000351097 TJP1Q07157 1748 aa28.54■■■□□ 2.16
USP25-203ENST00000351097 DOT1LQ8TEK3 1739 aa28.54■■■□□ 2.16
USP25-203ENST00000351097 CCDC173Q0VFZ6 552 aa28.54■■■□□ 2.16
USP25-203ENST00000351097 ECHDC1Q9NTX5 307 aa28.54■■■□□ 2.16
USP25-203ENST00000351097 ESPNB1AK53 854 aa28.53■■■□□ 2.16
USP25-203ENST00000351097 FOXO4P98177 505 aa28.53■■■□□ 2.16
USP25-203ENST00000351097 CYP19A1P11511 503 aaPredicted RBP28.52■■■□□ 2.16
USP25-203ENST00000351097 HSPA4P34932 840 aa28.52■■■□□ 2.16
USP25-203ENST00000351097 ISCA1Q9BUE6 129 aa28.52■■■□□ 2.16
USP25-203ENST00000351097 BRD1O95696 1058 aa28.51■■■□□ 2.16
USP25-203ENST00000351097 LMBR1LQ6UX01 489 aa28.51■■■□□ 2.16
USP25-203ENST00000351097 BARGINQ6ZT62 677 aa28.51■■■□□ 2.16
USP25-203ENST00000351097 MARCH10Q8NA82 808 aaPredicted RBP28.51■■■□□ 2.16
USP25-203ENST00000351097 IL25Q9H293 177 aa28.51■■■□□ 2.16
USP25-203ENST00000351097 TCIRG1Q13488 830 aa28.51■■■□□ 2.15
USP25-203ENST00000351097 CNTROBQ8N137 903 aa28.51■■■□□ 2.15
USP25-203ENST00000351097 GPT2Q8TD30 523 aa28.51■■■□□ 2.15
USP25-203ENST00000351097 ANP32BQ92688 251 aaKnown RBP28.51■■■□□ 2.15
USP25-203ENST00000351097 GPATCH3Q96I76 525 aa28.51■■■□□ 2.15
USP25-203ENST00000351097 PPP1R9BQ96SB3 815 aa28.51■■■□□ 2.15
USP25-203ENST00000351097 CCDC9Q9Y3X0 531 aaKnown RBP28.51■■■□□ 2.15
USP25-203ENST00000351097 KIF6Q6ZMV9 814 aa28.5■■■□□ 2.15
USP25-203ENST00000351097 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.49■■■□□ 2.15
USP25-203ENST00000351097 UPF3BQ9BZI7 483 aaKnown RBP28.49■■■□□ 2.15
USP25-203ENST00000351097 CCDC8Q9H0W5 538 aaPredicted RBP28.49■■■□□ 2.15
USP25-203ENST00000351097 KAT6BQ8WYB5 2073 aa28.49■■■□□ 2.15
USP25-203ENST00000351097 SGSM2O43147 1006 aa28.48■■■□□ 2.15
USP25-203ENST00000351097 TLR7Q9NYK1 1049 aaKnown RBP28.48■■■□□ 2.15
USP25-203ENST00000351097 RAD50Q92878 1312 aa28.48■■■□□ 2.15
USP25-203ENST00000351097 NOL8Q76FK4 1167 aaKnown RBP28.48■■■□□ 2.15
USP25-203ENST00000351097 TRIM28Q13263 835 aaKnown RBP28.47■■■□□ 2.15
USP25-203ENST00000351097 ZBTB1Q9Y2K1 713 aa28.47■■■□□ 2.15
USP25-203ENST00000351097 FOXD4L5Q5VV16 416 aaPredicted RBP28.46■■■□□ 2.15
USP25-203ENST00000351097 FOXD4L4Q8WXT5 416 aaPredicted RBP28.46■■■□□ 2.15
USP25-203ENST00000351097 ACSBG1Q96GR2 724 aa28.46■■■□□ 2.15
USP25-203ENST00000351097 MAP3K15Q6ZN16 1313 aa28.46■■■□□ 2.15
USP25-203ENST00000351097 JCADQ9P266 1359 aa28.45■■■□□ 2.14
USP25-203ENST00000351097 MBD3O95983 291 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms