RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 SLFN5Q08AF3 891 aa28.42■■■□□ 2.14
SNX3-202ENST00000349379 ERFEQ4G0M1 354 aa28.42■■■□□ 2.14
SNX3-202ENST00000349379 TTLL6Q8N841 843 aa28.42■■■□□ 2.14
SNX3-202ENST00000349379 FER1L6Q2WGJ9 1857 aa28.41■■■□□ 2.14
SNX3-202ENST00000349379 TCERG1O14776 1098 aaKnown RBP28.41■■■□□ 2.14
SNX3-202ENST00000349379 YY1P25490 414 aa28.41■■■□□ 2.14
SNX3-202ENST00000349379 GTF2E1P29083 439 aaPredicted RBP28.41■■■□□ 2.14
SNX3-202ENST00000349379 STYK1Q6J9G0 422 aa28.41■■■□□ 2.14
SNX3-202ENST00000349379 TRIM28Q13263 835 aaKnown RBP28.4■■■□□ 2.14
SNX3-202ENST00000349379 UTP14AQ9BVJ6 771 aaKnown RBP28.4■■■□□ 2.14
SNX3-202ENST00000349379 CRY2Q49AN0 593 aa28.39■■■□□ 2.14
SNX3-202ENST00000349379 RIC3Q7Z5B4 369 aa28.39■■■□□ 2.14
SNX3-202ENST00000349379 MASTLQ96GX5 879 aa28.39■■■□□ 2.14
SNX3-202ENST00000349379 CCDC88AQ3V6T2 1871 aa28.38■■■□□ 2.13
SNX3-202ENST00000349379 DDX58O95786 925 aaKnown RBP28.38■■■□□ 2.13
SNX3-202ENST00000349379 SLC4A2P04920 1241 aa28.38■■■□□ 2.13
SNX3-202ENST00000349379 SLC10A5Q5PT55 438 aa28.38■■■□□ 2.13
SNX3-202ENST00000349379 G2E3Q7L622 706 aa28.38■■■□□ 2.13
SNX3-202ENST00000349379 TRMT2AQ8IZ69 625 aaKnown RBP28.38■■■□□ 2.13
SNX3-202ENST00000349379 ZNF622Q969S3 477 aaKnown RBP eCLIP28.38■■■□□ 2.13
SNX3-202ENST00000349379 ADCY9O60503 1353 aa28.37■■■□□ 2.13
SNX3-202ENST00000349379 NPR1P16066 1061 aa28.37■■■□□ 2.13
SNX3-202ENST00000349379 KSR2Q6VAB6 950 aa28.36■■■□□ 2.13
SNX3-202ENST00000349379 CNKSR1Q969H4 720 aa28.36■■■□□ 2.13
SNX3-202ENST00000349379 CDCA7LQ96GN5 454 aa28.36■■■□□ 2.13
SNX3-202ENST00000349379 ATP5J2-PTCD1G3V325 749 aa28.35■■■□□ 2.13
SNX3-202ENST00000349379 METTL22Q9BUU2 404 aaPredicted RBP28.35■■■□□ 2.13
SNX3-202ENST00000349379 FLIIQ13045 1269 aa28.34■■■□□ 2.13
SNX3-202ENST00000349379 PI4KAP2A4QPH2 592 aa28.33■■■□□ 2.13
SNX3-202ENST00000349379 ARHGAP27Q6ZUM4 889 aa28.33■■■□□ 2.13
SNX3-202ENST00000349379 PI4KAP1Q8N8J0 262 aa28.33■■■□□ 2.13
SNX3-202ENST00000349379 TRMT112Q9UI30 125 aaKnown RBP28.33■■■□□ 2.13
SNX3-202ENST00000349379 MAP3K2Q9Y2U5 619 aa28.33■■■□□ 2.13
SNX3-202ENST00000349379 SH3TC1Q8TE82 1336 aa28.33■■■□□ 2.13
SNX3-202ENST00000349379 PRPF40BQ6NWY9 871 aaKnown RBP28.32■■■□□ 2.12
SNX3-202ENST00000349379 MYD88Q99836 296 aa28.32■■■□□ 2.12
SNX3-202ENST00000349379 C3orf67Q6ZVT6 689 aa28.31■■■□□ 2.12
SNX3-202ENST00000349379 SYNE4Q8N205 404 aa28.31■■■□□ 2.12
SNX3-202ENST00000349379 DICER1Q9UPY3 1922 aaKnown RBP28.31■■■□□ 2.12
SNX3-202ENST00000349379 HOXA10P31260 410 aaPredicted RBP28.3■■■□□ 2.12
SNX3-202ENST00000349379 CCDC191Q8NCU4 936 aa28.29■■■□□ 2.12
SNX3-202ENST00000349379 C7orf43Q8WVR3 580 aa28.29■■■□□ 2.12
SNX3-202ENST00000349379 NLRP3Q96P20 1036 aa28.29■■■□□ 2.12
SNX3-202ENST00000349379 MYH3P11055 1940 aa28.29■■■□□ 2.12
SNX3-202ENST00000349379 TAF1P21675 1872 aa28.29■■■□□ 2.12
SNX3-202ENST00000349379 IGKV5-2P06315 115 aa28.27■■■□□ 2.12
SNX3-202ENST00000349379 ALDH1B1P30837 517 aa28.27■■■□□ 2.12
SNX3-202ENST00000349379 C21orf2O43822 256 aa28.26■■■□□ 2.11
SNX3-202ENST00000349379 HCLS1P14317 486 aaPredicted RBP28.26■■■□□ 2.11
SNX3-202ENST00000349379 FKBP5Q13451 457 aaPredicted RBP28.26■■■□□ 2.11
SNX3-202ENST00000349379 ZNF428Q96B54 188 aa28.26■■■□□ 2.11
SNX3-202ENST00000349379 FAM89AQ96GI7 184 aa28.26■■■□□ 2.11
SNX3-202ENST00000349379 NFKBIEO00221 500 aa28.25■■■□□ 2.11
SNX3-202ENST00000349379 ZBTB38Q8NAP3 1195 aaPredicted RBP28.25■■■□□ 2.11
SNX3-202ENST00000349379 RPGRQ92834 1020 aaKnown RBP28.25■■■□□ 2.11
SNX3-202ENST00000349379 CRAMP1Q96RY5 1269 aa28.25■■■□□ 2.11
SNX3-202ENST00000349379 CWC25Q9NXE8 425 aaPredicted RBP28.25■■■□□ 2.11
SNX3-202ENST00000349379 DNAAF4Q8WXU2 420 aa28.24■■■□□ 2.11
SNX3-202ENST00000349379 SNED1Q8TER0 1413 aa28.24■■■□□ 2.11
SNX3-202ENST00000349379 TIAM2Q8IVF5 1701 aa28.23■■■□□ 2.11
SNX3-202ENST00000349379 PCCAP05165 728 aaPredicted RBP28.23■■■□□ 2.11
SNX3-202ENST00000349379 HNRNPUQ00839 825 aaKnown RBP eCLIP28.23■■■□□ 2.11
SNX3-202ENST00000349379 NEXNQ0ZGT2 675 aa28.23■■■□□ 2.11
SNX3-202ENST00000349379 SOGA3Q5TF21 947 aa28.23■■■□□ 2.11
SNX3-202ENST00000349379 ZNF784Q8NCA9 323 aaPredicted RBP28.23■■■□□ 2.11
SNX3-202ENST00000349379 RBM17Q96I25 401 aaKnown RBP28.23■■■□□ 2.11
SNX3-202ENST00000349379 NEURL1BA8MQ27 555 aa28.22■■■□□ 2.11
SNX3-202ENST00000349379 CT47B1P0C2W7 299 aaPredicted RBP28.22■■■□□ 2.11
SNX3-202ENST00000349379 RASSF7Q02833 373 aa28.22■■■□□ 2.11
SNX3-202ENST00000349379 LTBP3Q9NS15 1303 aa28.21■■■□□ 2.11
SNX3-202ENST00000349379 PRELPP51888 382 aa28.21■■■□□ 2.11
SNX3-202ENST00000349379 MRPL50Q8N5N7 158 aaKnown RBP28.21■■■□□ 2.11
SNX3-202ENST00000349379 ZNF219Q9P2Y4 722 aaPredicted RBP28.21■■■□□ 2.11
SNX3-202ENST00000349379 IRS4O14654 1257 aaPredicted RBP28.2■■■□□ 2.1
SNX3-202ENST00000349379 SF3B3Q15393 1217 aaKnown RBP28.2■■■□□ 2.1
SNX3-202ENST00000349379 CWF19L2Q2TBE0 894 aaKnown RBP28.2■■■□□ 2.1
SNX3-202ENST00000349379 LRRC37AA6NMS7 1700 aa28.2■■■□□ 2.1
SNX3-202ENST00000349379 CDHR2Q9BYE9 1310 aa28.19■■■□□ 2.1
SNX3-202ENST00000349379 RTL5Q5HYW3 569 aaPredicted RBP28.19■■■□□ 2.1
SNX3-202ENST00000349379 C9orf131Q5VYM1 1079 aa28.19■■■□□ 2.1
SNX3-202ENST00000349379 SSH1Q8WYL5 1049 aa28.19■■■□□ 2.1
SNX3-202ENST00000349379 ABCC4O15439 1325 aa28.18■■■□□ 2.1
SNX3-202ENST00000349379 ALDH1L2Q3SY69 923 aa28.18■■■□□ 2.1
SNX3-202ENST00000349379 CCDC93Q567U6 631 aa28.18■■■□□ 2.1
SNX3-202ENST00000349379 LINS1Q8NG48 757 aa28.18■■■□□ 2.1
SNX3-202ENST00000349379 COL4A1P02462 1669 aa28.18■■■□□ 2.1
SNX3-202ENST00000349379 F6X3S4 739 aa28.17■■■□□ 2.1
SNX3-202ENST00000349379 HSP90B1P14625 803 aaKnown RBP28.16■■■□□ 2.1
SNX3-202ENST00000349379 LMNB1P20700 586 aa28.16■■■□□ 2.1
SNX3-202ENST00000349379 OLFM4Q6UX06 510 aa28.16■■■□□ 2.1
SNX3-202ENST00000349379 RNF181Q9P0P0 153 aa28.16■■■□□ 2.1
SNX3-202ENST00000349379 ZBED9Q6R2W3 1325 aa28.16■■■□□ 2.1
SNX3-202ENST00000349379 GCKRQ14397 625 aa28.15■■■□□ 2.1
SNX3-202ENST00000349379 BEND3Q5T5X7 828 aa28.15■■■□□ 2.1
SNX3-202ENST00000349379 TAOK3Q9H2K8 898 aa28.15■■■□□ 2.1
SNX3-202ENST00000349379 H7C1W4 665 aa28.14■■■□□ 2.1
SNX3-202ENST00000349379 PPEF1O14829 653 aaPredicted RBP28.14■■■□□ 2.1
SNX3-202ENST00000349379 CC2D2BQ6DHV5 1058 aa28.14■■■□□ 2.1
SNX3-202ENST00000349379 DDX46Q7L014 1031 aaKnown RBP28.14■■■□□ 2.1
SNX3-202ENST00000349379 JARID2Q92833 1246 aaPredicted RBP28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms