RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 NMIQ13287 307 aaPredicted RBP21.04■□□□□ 0.96
APP-202ENST00000348990 COL9A3Q14050 684 aaPredicted RBP21.03■□□□□ 0.96
APP-202ENST00000348990 NPHP3Q7Z494 1330 aa21.03■□□□□ 0.96
APP-202ENST00000348990 SKILP12757 684 aa21.03■□□□□ 0.96
APP-202ENST00000348990 ST3GAL1Q11201 340 aa21.03■□□□□ 0.96
APP-202ENST00000348990 CCDC144BQ3MJ40 725 aa21.03■□□□□ 0.96
APP-202ENST00000348990 CCDC144CPQ8IYA2 1237 aa21.03■□□□□ 0.96
APP-202ENST00000348990 USP16Q9Y5T5 823 aa21.03■□□□□ 0.96
APP-202ENST00000348990 ZRSR1Q15695 479 aaKnown RBP21.02■□□□□ 0.96
APP-202ENST00000348990 CTNNA3Q9UI47 895 aa21.02■□□□□ 0.96
APP-202ENST00000348990 HTATSF1O43719 755 aaKnown RBP21.02■□□□□ 0.95
APP-202ENST00000348990 JAK2O60674 1132 aa21.02■□□□□ 0.95
APP-202ENST00000348990 CLSTN2Q9H4D0 955 aa21.02■□□□□ 0.95
APP-202ENST00000348990 G3BP1Q13283 466 aaKnown RBP eCLIP21.01■□□□□ 0.95
APP-202ENST00000348990 SYTL4Q96C24 671 aaPredicted RBP21.01■□□□□ 0.95
APP-202ENST00000348990 EVI5LQ96CN4 794 aa21.01■□□□□ 0.95
APP-202ENST00000348990 ZNF215Q9UL58 517 aaPredicted RBP21.01■□□□□ 0.95
APP-202ENST00000348990 HDGFP51858 240 aaKnown RBP21.01■□□□□ 0.95
APP-202ENST00000348990 POLA2Q14181 598 aa21.01■□□□□ 0.95
APP-202ENST00000348990 ERCC4Q92889 916 aaPredicted RBP21■□□□□ 0.95
APP-202ENST00000348990 LRRC2Q9BYS8 371 aa21■□□□□ 0.95
APP-202ENST00000348990 SLC27A2O14975 620 aa21■□□□□ 0.95
APP-202ENST00000348990 CDK11BP21127 795 aaKnown RBP21■□□□□ 0.95
APP-202ENST00000348990 TTC41PQ6P2S7 1318 aa21■□□□□ 0.95
APP-202ENST00000348990 USP27XA6NNY8 438 aa21■□□□□ 0.95
APP-202ENST00000348990 AIMP1Q12904 312 aaKnown RBP21■□□□□ 0.95
APP-202ENST00000348990 IL17RAQ96F46 866 aa21■□□□□ 0.95
APP-202ENST00000348990 BRF1Q92994 677 aa20.99■□□□□ 0.95
APP-202ENST00000348990 FMNL2Q96PY5 1086 aa20.99■□□□□ 0.95
APP-202ENST00000348990 SLC26A8Q96RN1 970 aa20.99■□□□□ 0.95
APP-202ENST00000348990 TM6SF1Q9BZW5 370 aa20.99■□□□□ 0.95
APP-202ENST00000348990 CLTCQ00610 1675 aaKnown RBP20.99■□□□□ 0.95
APP-202ENST00000348990 NECTIN1Q15223 517 aa20.99■□□□□ 0.95
APP-202ENST00000348990 ANKRD1Q15327 319 aa20.99■□□□□ 0.95
APP-202ENST00000348990 TMEM131LA2VDJ0 1609 aa20.99■□□□□ 0.95
APP-202ENST00000348990 TEFQ10587 303 aa20.98■□□□□ 0.95
APP-202ENST00000348990 TAF6LQ9Y6J9 622 aa20.98■□□□□ 0.95
APP-202ENST00000348990 MAPK8IP2Q13387 824 aaPredicted RBP20.98■□□□□ 0.95
APP-202ENST00000348990 ELF2Q15723 593 aa20.98■□□□□ 0.95
APP-202ENST00000348990 GORABQ5T7V8 394 aa20.98■□□□□ 0.95
APP-202ENST00000348990 CCDC73Q6ZRK6 1079 aa20.98■□□□□ 0.95
APP-202ENST00000348990 BBXQ8WY36 941 aaPredicted RBP20.98■□□□□ 0.95
APP-202ENST00000348990 KRT222Q8N1A0 295 aa20.97■□□□□ 0.95
APP-202ENST00000348990 CWF19L2Q2TBE0 894 aaKnown RBP20.97■□□□□ 0.95
APP-202ENST00000348990 CCDC69A6NI79 296 aa20.97■□□□□ 0.95
APP-202ENST00000348990 PLA2G4DQ86XP0 818 aa20.97■□□□□ 0.95
APP-202ENST00000348990 TDRD7Q8NHU6 1098 aaKnown RBP20.97■□□□□ 0.95
APP-202ENST00000348990 PGBD1Q96JS3 809 aa20.97■□□□□ 0.95
APP-202ENST00000348990 A0A0D9SFI3 127 aa20.96■□□□□ 0.95
APP-202ENST00000348990 GUCY1B3Q02153 619 aa20.96■□□□□ 0.95
APP-202ENST00000348990 LRRC8AQ8IWT6 810 aa20.96■□□□□ 0.95
APP-202ENST00000348990 KCNQ3O43525 872 aa20.96■□□□□ 0.95
APP-202ENST00000348990 KINO60870 393 aaKnown RBP20.96■□□□□ 0.95
APP-202ENST00000348990 DDX41Q9UJV9 622 aaKnown RBP20.96■□□□□ 0.95
APP-202ENST00000348990 FLT4P35916 1363 aa20.96■□□□□ 0.95
APP-202ENST00000348990 C11orf57Q6ZUT1 292 aaPredicted RBP20.96■□□□□ 0.95
APP-202ENST00000348990 EDC3Q96F86 508 aaKnown RBP20.96■□□□□ 0.95
APP-202ENST00000348990 ELP1O95163 1332 aa20.95■□□□□ 0.94
APP-202ENST00000348990 BEND3Q5T5X7 828 aa20.95■□□□□ 0.94
APP-202ENST00000348990 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.95■□□□□ 0.94
APP-202ENST00000348990 CCAR1Q8IX12 1150 aaKnown RBP20.95■□□□□ 0.94
APP-202ENST00000348990 KIF18AQ8NI77 898 aa20.95■□□□□ 0.94
APP-202ENST00000348990 SDF4Q9BRK5 362 aa20.95■□□□□ 0.94
APP-202ENST00000348990 ARHGEF10O15013 1369 aa20.95■□□□□ 0.94
APP-202ENST00000348990 MAP3K2Q9Y2U5 619 aa20.95■□□□□ 0.94
APP-202ENST00000348990 ZBTB22O15209 634 aa20.94■□□□□ 0.94
APP-202ENST00000348990 RPS6KB1P23443 525 aa20.94■□□□□ 0.94
APP-202ENST00000348990 TRERF1Q96PN7 1200 aa20.94■□□□□ 0.94
APP-202ENST00000348990 FTOQ9C0B1 505 aaKnown RBP eCLIP20.94■□□□□ 0.943e-6■□□□□ 10.9
APP-202ENST00000348990 ME1P48163 572 aa20.94■□□□□ 0.94
APP-202ENST00000348990 ERC1Q8IUD2 1116 aa20.94■□□□□ 0.94
APP-202ENST00000348990 ZNF397Q8NF99 534 aaPredicted RBP20.94■□□□□ 0.94
APP-202ENST00000348990 CFAP45Q9UL16 551 aa20.94■□□□□ 0.94
APP-202ENST00000348990 MAP3K5Q99683 1374 aa20.94■□□□□ 0.94
APP-202ENST00000348990 HIP1O00291 1037 aa20.94■□□□□ 0.94
APP-202ENST00000348990 KLHDC4Q8TBB5 520 aa20.94■□□□□ 0.94
APP-202ENST00000348990 MAP4K1Q92918 833 aa20.94■□□□□ 0.94
APP-202ENST00000348990 LGR6Q9HBX8 967 aa20.94■□□□□ 0.94
APP-202ENST00000348990 SMC2O95347 1197 aa20.93■□□□□ 0.94
APP-202ENST00000348990 HOMER1Q86YM7 354 aa20.93■□□□□ 0.94
APP-202ENST00000348990 NDUFB9Q9Y6M9 179 aa20.93■□□□□ 0.94
APP-202ENST00000348990 GABPB1Q06547 395 aaPredicted RBP20.93■□□□□ 0.94
APP-202ENST00000348990 KMT5BQ4FZB7 885 aa20.93■□□□□ 0.94
APP-202ENST00000348990 EAF2Q96CJ1 260 aaPredicted RBP20.92■□□□□ 0.94
APP-202ENST00000348990 TLR7Q9NYK1 1049 aaKnown RBP20.92■□□□□ 0.94
APP-202ENST00000348990 STX1AQ16623 288 aa20.92■□□□□ 0.94
APP-202ENST00000348990 AOPEPQ8N6M6 819 aa20.92■□□□□ 0.94
APP-202ENST00000348990 DNAJC2Q99543 621 aaKnown RBP20.92■□□□□ 0.94
APP-202ENST00000348990 DIP2CQ9Y2E4 1556 aa20.92■□□□□ 0.94
APP-202ENST00000348990 CCT2P78371 535 aaKnown RBP20.91■□□□□ 0.94
APP-202ENST00000348990 PDIA4P13667 645 aaKnown RBP20.91■□□□□ 0.94
APP-202ENST00000348990 Q6ZUG5 572 aa20.91■□□□□ 0.94
APP-202ENST00000348990 ABTB2Q8N961 1025 aa20.91■□□□□ 0.94
APP-202ENST00000348990 ST7Q9NRC1 585 aa20.91■□□□□ 0.94
APP-202ENST00000348990 IGSF1Q8N6C5 1336 aa20.91■□□□□ 0.94
APP-202ENST00000348990 TTC21AQ8NDW8 1320 aa20.91■□□□□ 0.94
APP-202ENST00000348990 DLC1Q96QB1 1528 aa20.9■□□□□ 0.94
APP-202ENST00000348990 BTBD11A6QL63 1104 aa20.9■□□□□ 0.94
APP-202ENST00000348990 TOB2Q14106 344 aaPredicted RBP20.9■□□□□ 0.94
APP-202ENST00000348990 SF3A1Q15459 793 aaKnown RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms