RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 GJB2P29033 226 aa15.89■□□□□ 0.13
CASC4-202ENST00000345795 MPHOSPH8Q99549 860 aa15.89■□□□□ 0.13
CASC4-202ENST00000345795 BRF1Q92994 677 aa15.89■□□□□ 0.13
CASC4-202ENST00000345795 NGLY1Q96IV0 654 aa15.89■□□□□ 0.13
CASC4-202ENST00000345795 DCAF5Q96JK2 942 aa15.89■□□□□ 0.13
CASC4-202ENST00000345795 CEP170BQ9Y4F5 1589 aaPredicted RBP15.89■□□□□ 0.13
CASC4-202ENST00000345795 SRCAPQ6ZRS2 3230 aa15.88■□□□□ 0.13
CASC4-202ENST00000345795 A0A0D9SFI3 127 aa15.88■□□□□ 0.13
CASC4-202ENST00000345795 MRE11P49959 708 aa15.88■□□□□ 0.13
CASC4-202ENST00000345795 MEX3CQ5U5Q3 659 aaKnown RBP15.88■□□□□ 0.13
CASC4-202ENST00000345795 GAS2L3Q86XJ1 694 aa15.88■□□□□ 0.13
CASC4-202ENST00000345795 KIF2CQ99661 725 aa15.88■□□□□ 0.13
CASC4-202ENST00000345795 NEURL1BA8MQ27 555 aa15.88■□□□□ 0.13
CASC4-202ENST00000345795 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.88■□□□□ 0.13
CASC4-202ENST00000345795 TAF5LO75529 589 aa15.87■□□□□ 0.13
CASC4-202ENST00000345795 IFIT5Q13325 482 aaKnown RBP15.87■□□□□ 0.13
CASC4-202ENST00000345795 CCDC158Q5M9N0 1113 aa15.87■□□□□ 0.13
CASC4-202ENST00000345795 RALYLQ86SE5 291 aaKnown RBP15.87■□□□□ 0.13
CASC4-202ENST00000345795 NPHP4O75161 1426 aaPredicted RBP15.87■□□□□ 0.13
CASC4-202ENST00000345795 STARD3NLO95772 234 aa15.87■□□□□ 0.13
CASC4-202ENST00000345795 IGKV5-2P06315 115 aa15.87■□□□□ 0.13
CASC4-202ENST00000345795 SKOR2Q2VWA4 1001 aaPredicted RBP15.87■□□□□ 0.13
CASC4-202ENST00000345795 DNM1Q05193 864 aaKnown RBP15.86■□□□□ 0.13
CASC4-202ENST00000345795 SSH3Q8TE77 659 aa15.86■□□□□ 0.13
CASC4-202ENST00000345795 GADD45BO75293 160 aaPredicted RBP15.86■□□□□ 0.13
CASC4-202ENST00000345795 CHAF1AQ13111 956 aaPredicted RBP15.86■□□□□ 0.13
CASC4-202ENST00000345795 RAB3GAP1Q15042 981 aa15.86■□□□□ 0.13
CASC4-202ENST00000345795 ZNF830Q96NB3 372 aaPredicted RBP15.86■□□□□ 0.13
CASC4-202ENST00000345795 COL3A1P02461 1466 aaPredicted RBP15.86■□□□□ 0.13
CASC4-202ENST00000345795 NCOA5Q9HCD5 579 aaKnown RBP15.86■□□□□ 0.13
CASC4-202ENST00000345795 GIMAP6Q6P9H5 292 aa15.85■□□□□ 0.13
CASC4-202ENST00000345795 BRINP3Q76B58 766 aa15.85■□□□□ 0.13
CASC4-202ENST00000345795 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.85■□□□□ 0.13
CASC4-202ENST00000345795 SNX14Q9Y5W7 946 aa15.85■□□□□ 0.13
CASC4-202ENST00000345795 RICTORQ6R327 1708 aa15.85■□□□□ 0.13
CASC4-202ENST00000345795 SAMD1Q6SPF0 538 aaPredicted RBP15.85■□□□□ 0.13
CASC4-202ENST00000345795 OVOS2A0A0J9YW53 1432 aa15.85■□□□□ 0.13
CASC4-202ENST00000345795 CRB1P82279 1406 aa15.85■□□□□ 0.13
CASC4-202ENST00000345795 OVOS2Q6IE36 1432 aa15.85■□□□□ 0.13
CASC4-202ENST00000345795 EVI5LQ96CN4 794 aa15.85■□□□□ 0.13
CASC4-202ENST00000345795 LIMCH1Q9UPQ0 1083 aa15.85■□□□□ 0.13
CASC4-202ENST00000345795 NSFL1CQ9UNZ2 370 aaKnown RBP15.84■□□□□ 0.13
CASC4-202ENST00000345795 SASH1O94885 1247 aa15.84■□□□□ 0.13
CASC4-202ENST00000345795 TTLL5Q6EMB2 1281 aa15.84■□□□□ 0.13
CASC4-202ENST00000345795 OTUD7BQ6GQQ9 843 aa15.84■□□□□ 0.13
CASC4-202ENST00000345795 ISM2Q6H9L7 571 aa15.84■□□□□ 0.13
CASC4-202ENST00000345795 ZNF589Q86UQ0 364 aaPredicted RBP15.84■□□□□ 0.13
CASC4-202ENST00000345795 SYAP1Q96A49 352 aaPredicted RBP15.84■□□□□ 0.13
CASC4-202ENST00000345795 ATP6V1AP38606 617 aa15.84■□□□□ 0.13
CASC4-202ENST00000345795 METTL22Q9BUU2 404 aaPredicted RBP15.84■□□□□ 0.13
CASC4-202ENST00000345795 LARGE1O95461 756 aa15.83■□□□□ 0.13
CASC4-202ENST00000345795 NUP133Q8WUM0 1156 aa15.83■□□□□ 0.13
CASC4-202ENST00000345795 MINDY4BA8MYZ0 360 aa15.83■□□□□ 0.12
CASC4-202ENST00000345795 SGSM2O43147 1006 aa15.83■□□□□ 0.12
CASC4-202ENST00000345795 TRDNQ13061 729 aa15.83■□□□□ 0.12
CASC4-202ENST00000345795 ERCC4Q92889 916 aaPredicted RBP15.83■□□□□ 0.12
CASC4-202ENST00000345795 SNX21Q969T3 373 aa15.83■□□□□ 0.12
CASC4-202ENST00000345795 PTCH1Q13635 1447 aa15.83■□□□□ 0.12
CASC4-202ENST00000345795 POLR3DP05423 398 aaPredicted RBP15.83■□□□□ 0.12
CASC4-202ENST00000345795 CREB3L3Q68CJ9 461 aa15.83■□□□□ 0.12
CASC4-202ENST00000345795 USP48Q86UV5 1035 aa15.82■□□□□ 0.12
CASC4-202ENST00000345795 CDC42BPGQ6DT37 1551 aa15.82■□□□□ 0.12
CASC4-202ENST00000345795 IBTKQ9P2D0 1353 aaPredicted RBP15.82■□□□□ 0.12
CASC4-202ENST00000345795 ZSCAN23Q3MJ62 389 aa15.82■□□□□ 0.12
CASC4-202ENST00000345795 MIGA1Q8NAN2 632 aa15.82■□□□□ 0.12
CASC4-202ENST00000345795 ZNF219Q9P2Y4 722 aaPredicted RBP15.82■□□□□ 0.12
CASC4-202ENST00000345795 DBNLQ9UJU6 430 aaKnown RBP15.82■□□□□ 0.12
CASC4-202ENST00000345795 TAF6LQ9Y6J9 622 aa15.82■□□□□ 0.12
CASC4-202ENST00000345795 A0A1B0GUL7 405 aa15.82■□□□□ 0.12
CASC4-202ENST00000345795 STX6O43752 255 aa15.82■□□□□ 0.12
CASC4-202ENST00000345795 ALDH1L1O75891 902 aa15.82■□□□□ 0.12
CASC4-202ENST00000345795 FAM98CQ17RN3 349 aaKnown RBP15.82■□□□□ 0.12
CASC4-202ENST00000345795 JAK2O60674 1132 aa15.81■□□□□ 0.12
CASC4-202ENST00000345795 PSMA5P28066 241 aa15.81■□□□□ 0.12
CASC4-202ENST00000345795 USP25Q9UHP3 1055 aa15.81■□□□□ 0.12
CASC4-202ENST00000345795 WDR33Q9C0J8 1336 aaKnown RBP15.81■□□□□ 0.12
CASC4-202ENST00000345795 BRPF1P55201 1214 aaPredicted RBP15.81■□□□□ 0.12
CASC4-202ENST00000345795 APOBRQ0VD83 1088 aa15.81■□□□□ 0.12
CASC4-202ENST00000345795 CIZ1Q9ULV3 898 aaPredicted RBP15.81■□□□□ 0.12
CASC4-202ENST00000345795 ADORA1P30542 326 aa15.81■□□□□ 0.12
CASC4-202ENST00000345795 TNNI3KQ59H18 835 aa15.81■□□□□ 0.12
CASC4-202ENST00000345795 CWC22Q9HCG8 908 aaKnown RBP15.81■□□□□ 0.12
CASC4-202ENST00000345795 LRP2BPQ9P2M1 347 aa15.81■□□□□ 0.12
CASC4-202ENST00000345795 FPGT-TNNI3KV9GXZ4 949 aa15.81■□□□□ 0.12
CASC4-202ENST00000345795 VPS53Q5VIR6 699 aa15.8■□□□□ 0.12
CASC4-202ENST00000345795 SYT1P21579 422 aa15.8■□□□□ 0.12
CASC4-202ENST00000345795 KIAA1210Q9ULL0 1709 aa15.8■□□□□ 0.12
CASC4-202ENST00000345795 A0A087WWV3 80 aa15.8■□□□□ 0.12
CASC4-202ENST00000345795 Q6ZUG5 572 aa15.8■□□□□ 0.12
CASC4-202ENST00000345795 ZKSCAN3Q9BRR0 538 aa15.8■□□□□ 0.12
CASC4-202ENST00000345795 MICU3Q86XE3 530 aa15.79■□□□□ 0.12
CASC4-202ENST00000345795 DZIP3Q86Y13 1208 aaKnown RBP15.79■□□□□ 0.12
CASC4-202ENST00000345795 RAI14Q9P0K7 980 aa15.79■□□□□ 0.12
CASC4-202ENST00000345795 ME1P48163 572 aa15.79■□□□□ 0.12
CASC4-202ENST00000345795 DDB1Q16531 1140 aa15.79■□□□□ 0.12
CASC4-202ENST00000345795 ZBTB1Q9Y2K1 713 aa15.79■□□□□ 0.12
CASC4-202ENST00000345795 DLC1Q96QB1 1528 aa15.79■□□□□ 0.12
CASC4-202ENST00000345795 ADCY9O60503 1353 aa15.78■□□□□ 0.12
CASC4-202ENST00000345795 R3HCC1Q9Y3T6 440 aaKnown RBP15.78■□□□□ 0.12
CASC4-202ENST00000345795 MCM2P49736 904 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms