RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 NUTM1Q86Y26 1132 aa23.34■■□□□ 1.33
USF2-202ENST00000343550 NECTIN2Q92692 538 aa23.34■■□□□ 1.33
USF2-202ENST00000343550 KLRG1Q96E93 195 aa23.34■■□□□ 1.33
USF2-202ENST00000343550 DICER1Q9UPY3 1922 aaKnown RBP23.34■■□□□ 1.33
USF2-202ENST00000343550 DDNO94850 711 aaPredicted RBP23.33■■□□□ 1.33
USF2-202ENST00000343550 OLFM4Q6UX06 510 aa23.33■■□□□ 1.33
USF2-202ENST00000343550 CACNA1SQ13698 1873 aa23.33■■□□□ 1.33
USF2-202ENST00000343550 GPTP24298 496 aa23.33■■□□□ 1.32
USF2-202ENST00000343550 FKBP4Q02790 459 aaKnown RBP eCLIP23.33■■□□□ 1.32
USF2-202ENST00000343550 CRY2Q49AN0 593 aa23.33■■□□□ 1.32
USF2-202ENST00000343550 LRP10Q7Z4F1 713 aa23.33■■□□□ 1.32
USF2-202ENST00000343550 RTKN2Q8IZC4 609 aa23.33■■□□□ 1.32
USF2-202ENST00000343550 C8orf58Q8NAV2 365 aa23.32■■□□□ 1.32
USF2-202ENST00000343550 TSR2Q969E8 191 aaKnown RBP23.32■■□□□ 1.32
USF2-202ENST00000343550 ABCC12Q96J65 1359 aa23.31■■□□□ 1.32
USF2-202ENST00000343550 ELL2O00472 640 aaPredicted RBP23.31■■□□□ 1.32
USF2-202ENST00000343550 PROSER3Q2NL68 480 aa23.31■■□□□ 1.32
USF2-202ENST00000343550 SUSD4Q5VX71 490 aa23.31■■□□□ 1.32
USF2-202ENST00000343550 GIGYF2Q6Y7W6 1299 aaKnown RBP23.31■■□□□ 1.32
USF2-202ENST00000343550 ZNF34Q8IZ26 560 aa23.31■■□□□ 1.32
USF2-202ENST00000343550 ZNF277Q9NRM2 450 aaPredicted RBP23.31■■□□□ 1.32
USF2-202ENST00000343550 UBN2Q6ZU65 1347 aa23.31■■□□□ 1.32
USF2-202ENST00000343550 ANXA1P04083 346 aa23.3■■□□□ 1.32
USF2-202ENST00000343550 HDGFL1Q5TGJ6 251 aa23.3■■□□□ 1.32
USF2-202ENST00000343550 DDX21Q9NR30 783 aaKnown RBP eCLIP23.29■■□□□ 1.32
USF2-202ENST00000343550 IBTKQ9P2D0 1353 aaPredicted RBP23.29■■□□□ 1.32
USF2-202ENST00000343550 NUP98P52948 1817 aa23.29■■□□□ 1.32
USF2-202ENST00000343550 JMYQ8N9B5 988 aa23.28■■□□□ 1.32
USF2-202ENST00000343550 TSPYL6Q8N831 410 aa23.28■■□□□ 1.32
USF2-202ENST00000343550 RPGRQ92834 1020 aaKnown RBP23.28■■□□□ 1.32
USF2-202ENST00000343550 SPINK5Q9NQ38 1064 aaPredicted RBP23.28■■□□□ 1.32
USF2-202ENST00000343550 CHPF2Q9P2E5 772 aa23.28■■□□□ 1.32
USF2-202ENST00000343550 HOXA10P31260 410 aaPredicted RBP23.27■■□□□ 1.32
USF2-202ENST00000343550 SYNE4Q8N205 404 aa23.27■■□□□ 1.32
USF2-202ENST00000343550 ZNF521Q96K83 1311 aa23.27■■□□□ 1.32
USF2-202ENST00000343550 NTSR2O95665 410 aa23.26■■□□□ 1.31
USF2-202ENST00000343550 COPS6Q7L5N1 327 aa23.26■■□□□ 1.31
USF2-202ENST00000343550 PPP1R42Q7Z4L9 355 aa23.26■■□□□ 1.31
USF2-202ENST00000343550 L3MBTL3Q96JM7 780 aaPredicted RBP23.26■■□□□ 1.31
USF2-202ENST00000343550 DBF4Q9UBU7 674 aaPredicted RBP23.26■■□□□ 1.31
USF2-202ENST00000343550 IQCA1LA6NCM1 817 aa23.25■■□□□ 1.31
USF2-202ENST00000343550 IARSP41252 1262 aaKnown RBP23.25■■□□□ 1.31
USF2-202ENST00000343550 PARP10Q53GL7 1025 aa23.25■■□□□ 1.31
USF2-202ENST00000343550 CHADLQ6NUI6 762 aa23.25■■□□□ 1.31
USF2-202ENST00000343550 RIC1Q4ADV7 1423 aa23.25■■□□□ 1.31
USF2-202ENST00000343550 CC2D2BQ6DHV5 1058 aa23.24■■□□□ 1.31
USF2-202ENST00000343550 PSMD1Q99460 953 aa23.24■■□□□ 1.31
USF2-202ENST00000343550 FANCIQ9NVI1 1328 aa23.24■■□□□ 1.31
USF2-202ENST00000343550 ZNF541Q9H0D2 1346 aa23.23■■□□□ 1.31
USF2-202ENST00000343550 POTEIP0CG38 1075 aa23.23■■□□□ 1.31
USF2-202ENST00000343550 POTEJP0CG39 1038 aa23.23■■□□□ 1.31
USF2-202ENST00000343550 AIMP1Q12904 312 aaKnown RBP23.23■■□□□ 1.31
USF2-202ENST00000343550 XAGE3Q8WTP9 111 aa23.23■■□□□ 1.31
USF2-202ENST00000343550 RBM17Q96I25 401 aaKnown RBP23.23■■□□□ 1.31
USF2-202ENST00000343550 GOLGA2Q08379 1002 aa23.23■■□□□ 1.31
USF2-202ENST00000343550 CRAMP1Q96RY5 1269 aa23.23■■□□□ 1.31
USF2-202ENST00000343550 CHMP4AQ9BY43 222 aa23.23■■□□□ 1.31
USF2-202ENST00000343550 HYPKQ9NX55 129 aa23.23■■□□□ 1.31
USF2-202ENST00000343550 SNED1Q8TER0 1413 aa23.22■■□□□ 1.31
USF2-202ENST00000343550 FZD9O00144 591 aa23.22■■□□□ 1.31
USF2-202ENST00000343550 TWISTNBQ3B726 338 aaPredicted RBP23.22■■□□□ 1.31
USF2-202ENST00000343550 C3orf67Q6ZVT6 689 aa23.22■■□□□ 1.31
USF2-202ENST00000343550 UTP14AQ9BVJ6 771 aaKnown RBP23.22■■□□□ 1.31
USF2-202ENST00000343550 TAF1DQ9H5J8 278 aaPredicted RBP23.22■■□□□ 1.31
USF2-202ENST00000343550 GRIPAP1Q4V328 841 aa23.21■■□□□ 1.31
USF2-202ENST00000343550 CCDC30Q5VVM6 783 aa23.21■■□□□ 1.31
USF2-202ENST00000343550 NLRP3Q96P20 1036 aa23.21■■□□□ 1.31
USF2-202ENST00000343550 MYH16Q9H6N6 1097 aa23.21■■□□□ 1.31
USF2-202ENST00000343550 PCNTO95613 3336 aa23.2■■□□□ 1.3
USF2-202ENST00000343550 SLC10A5Q5PT55 438 aa23.2■■□□□ 1.3
USF2-202ENST00000343550 JDP2Q8WYK2 163 aa23.2■■□□□ 1.3
USF2-202ENST00000343550 EXOSC9Q06265 439 aaKnown RBP23.19■■□□□ 1.3
USF2-202ENST00000343550 LDHDQ86WU2 507 aa23.19■■□□□ 1.3
USF2-202ENST00000343550 PPEF1O14829 653 aaPredicted RBP23.18■■□□□ 1.3
USF2-202ENST00000343550 HSP90AB3PQ58FF7 597 aa23.18■■□□□ 1.3
USF2-202ENST00000343550 HACL1Q9UJ83 578 aa23.18■■□□□ 1.3
USF2-202ENST00000343550 TCERG1O14776 1098 aaKnown RBP23.18■■□□□ 1.3
USF2-202ENST00000343550 VAMP4O75379 141 aa23.18■■□□□ 1.3
USF2-202ENST00000343550 ANKRD13DQ6ZTN6 518 aa23.18■■□□□ 1.3
USF2-202ENST00000343550 PHAXQ9H814 394 aaKnown RBP23.18■■□□□ 1.3
USF2-202ENST00000343550 NLRP10Q86W26 655 aa23.17■■□□□ 1.3
USF2-202ENST00000343550 GPC2Q8N158 579 aa23.17■■□□□ 1.3
USF2-202ENST00000343550 CREBZFQ9NS37 354 aa23.17■■□□□ 1.3
USF2-202ENST00000343550 SCN4AP35499 1836 aa23.17■■□□□ 1.3
USF2-202ENST00000343550 RNF123Q5XPI4 1314 aa23.16■■□□□ 1.3
USF2-202ENST00000343550 TCIRG1Q13488 830 aa23.16■■□□□ 1.3
USF2-202ENST00000343550 EAPPQ56P03 285 aaPredicted RBP23.16■■□□□ 1.3
USF2-202ENST00000343550 PLBD2Q8NHP8 589 aa23.16■■□□□ 1.3
USF2-202ENST00000343550 EPHX2P34913 555 aa23.15■■□□□ 1.3
USF2-202ENST00000343550 SLC51AQ86UW1 340 aa23.15■■□□□ 1.3
USF2-202ENST00000343550 TMX4Q9H1E5 349 aaPredicted RBP23.15■■□□□ 1.3
USF2-202ENST00000343550 EIF6P56537 245 aaKnown RBP23.14■■□□□ 1.3
USF2-202ENST00000343550 LARGE2Q8N3Y3 721 aa23.14■■□□□ 1.3
USF2-202ENST00000343550 E9PSI1 815 aa23.13■■□□□ 1.29
USF2-202ENST00000343550 SLFN5Q08AF3 891 aa23.13■■□□□ 1.29
USF2-202ENST00000343550 PNMA8AQ86V59 439 aaPredicted RBP23.13■■□□□ 1.29
USF2-202ENST00000343550 STK31Q9BXU1 1019 aa23.13■■□□□ 1.29
USF2-202ENST00000343550 TRMT112Q9UI30 125 aaKnown RBP23.13■■□□□ 1.29
USF2-202ENST00000343550 ATP6V0A2Q9Y487 856 aa23.13■■□□□ 1.29
USF2-202ENST00000343550 PASKQ96RG2 1323 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms