RNA–Protein interactions for RNA: ENST00000343420.6

CD55-202, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 5

Gene CD55, Length 978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-202ENST00000343420 CCDC93Q567U6 631 aa21.98■■□□□ 1.11
CD55-202ENST00000343420 GLTPD2A6NH11 291 aa21.97■■□□□ 1.11
CD55-202ENST00000343420 UTP14AQ9BVJ6 771 aaKnown RBP21.97■■□□□ 1.11
CD55-202ENST00000343420 RRAGCQ9HB90 399 aa21.97■■□□□ 1.11
CD55-202ENST00000343420 DBF4Q9UBU7 674 aaPredicted RBP21.97■■□□□ 1.11
CD55-202ENST00000343420 HSPA6P17066 643 aa21.96■■□□□ 1.11
CD55-202ENST00000343420 C16orf71Q8IYS4 520 aaPredicted RBP21.96■■□□□ 1.11
CD55-202ENST00000343420 HOXA10P31260 410 aaPredicted RBP21.95■■□□□ 1.1
CD55-202ENST00000343420 TCIRG1Q13488 830 aa21.95■■□□□ 1.1
CD55-202ENST00000343420 RPGRQ92834 1020 aaKnown RBP21.95■■□□□ 1.1
CD55-202ENST00000343420 MRS2Q9HD23 443 aa21.95■■□□□ 1.1
CD55-202ENST00000343420 HYPKQ9NX55 129 aa21.95■■□□□ 1.1
CD55-202ENST00000343420 RNF123Q5XPI4 1314 aa21.95■■□□□ 1.1
CD55-202ENST00000343420 SLC10A5Q5PT55 438 aa21.94■■□□□ 1.1
CD55-202ENST00000343420 NLRP10Q86W26 655 aa21.94■■□□□ 1.1
CD55-202ENST00000343420 RTKN2Q8IZC4 609 aa21.94■■□□□ 1.1
CD55-202ENST00000343420 RBM46Q8TBY0 533 aaKnown RBP21.94■■□□□ 1.1
CD55-202ENST00000343420 FKBP4Q02790 459 aaKnown RBP eCLIP21.93■■□□□ 1.1
CD55-202ENST00000343420 CCDC27Q2M243 656 aa21.93■■□□□ 1.1
CD55-202ENST00000343420 DPY19L2Q6NUT2 758 aa21.93■■□□□ 1.1
CD55-202ENST00000343420 ANKRD13DQ6ZTN6 518 aa21.93■■□□□ 1.1
CD55-202ENST00000343420 PLBD2Q8NHP8 589 aa21.93■■□□□ 1.1
CD55-202ENST00000343420 RBM17Q96I25 401 aaKnown RBP21.93■■□□□ 1.1
CD55-202ENST00000343420 NLRP3Q96P20 1036 aa21.93■■□□□ 1.1
CD55-202ENST00000343420 OLFM4Q6UX06 510 aa21.92■■□□□ 1.1
CD55-202ENST00000343420 CRAMP1Q96RY5 1269 aa21.92■■□□□ 1.1
CD55-202ENST00000343420 ELL2O00472 640 aaPredicted RBP21.91■■□□□ 1.1
CD55-202ENST00000343420 C3orf67Q6ZVT6 689 aa21.91■■□□□ 1.1
CD55-202ENST00000343420 LAMB2P55268 1798 aa21.91■■□□□ 1.1
CD55-202ENST00000343420 WDR90Q96KV7 1748 aa21.91■■□□□ 1.1
CD55-202ENST00000343420 VEGFAP15692 232 aaPredicted RBP21.9■■□□□ 1.1
CD55-202ENST00000343420 NCBP3Q53F19 620 aaKnown RBP21.9■■□□□ 1.1
CD55-202ENST00000343420 CC2D2BQ6DHV5 1058 aa21.9■■□□□ 1.1
CD55-202ENST00000343420 TRMT112Q9UI30 125 aaKnown RBP21.9■■□□□ 1.1
CD55-202ENST00000343420 WWC1Q8IX03 1113 aa21.89■■□□□ 1.09
CD55-202ENST00000343420 C8orf58Q8NAV2 365 aa21.89■■□□□ 1.09
CD55-202ENST00000343420 CHMP4AQ9BY43 222 aa21.89■■□□□ 1.09
CD55-202ENST00000343420 ZNF277Q9NRM2 450 aaPredicted RBP21.89■■□□□ 1.09
CD55-202ENST00000343420 SNED1Q8TER0 1413 aa21.89■■□□□ 1.09
CD55-202ENST00000343420 SH3TC1Q8TE82 1336 aa21.88■■□□□ 1.09
CD55-202ENST00000343420 FSTL1Q12841 308 aa21.88■■□□□ 1.09
CD55-202ENST00000343420 SYNE4Q8N205 404 aa21.88■■□□□ 1.09
CD55-202ENST00000343420 ISCA1Q9BUE6 129 aa21.88■■□□□ 1.09
CD55-202ENST00000343420 GRIPAP1Q4V328 841 aa21.87■■□□□ 1.09
CD55-202ENST00000343420 PSMD1Q99460 953 aa21.87■■□□□ 1.09
CD55-202ENST00000343420 PPEF1O14829 653 aaPredicted RBP21.86■■□□□ 1.09
CD55-202ENST00000343420 HCLS1P14317 486 aaPredicted RBP21.86■■□□□ 1.09
CD55-202ENST00000343420 IARSP41252 1262 aaKnown RBP21.86■■□□□ 1.09
CD55-202ENST00000343420 CCDC30Q5VVM6 783 aa21.86■■□□□ 1.09
CD55-202ENST00000343420 IL16Q14005 1332 aa21.85■■□□□ 1.09
CD55-202ENST00000343420 CEP350Q5VT06 3117 aa21.85■■□□□ 1.09
CD55-202ENST00000343420 POTECB2RU33 542 aa21.85■■□□□ 1.09
CD55-202ENST00000343420 APLP1P51693 650 aa21.85■■□□□ 1.09
CD55-202ENST00000343420 GOLGA2Q08379 1002 aa21.85■■□□□ 1.09
CD55-202ENST00000343420 PHAXQ9H814 394 aaKnown RBP21.85■■□□□ 1.09
CD55-202ENST00000343420 DDX60Q8IY21 1712 aaKnown RBP21.84■■□□□ 1.09
CD55-202ENST00000343420 ATP5J2-PTCD1G3V325 749 aa21.84■■□□□ 1.09
CD55-202ENST00000343420 TRIM28Q13263 835 aaKnown RBP21.84■■□□□ 1.09
CD55-202ENST00000343420 RIC3Q7Z5B4 369 aa21.84■■□□□ 1.09
CD55-202ENST00000343420 TSPYL6Q8N831 410 aa21.84■■□□□ 1.09
CD55-202ENST00000343420 SMC1BQ8NDV3 1235 aa21.84■■□□□ 1.09
CD55-202ENST00000343420 TSR2Q969E8 191 aaKnown RBP21.84■■□□□ 1.09
CD55-202ENST00000343420 ABCC4O15439 1325 aa21.83■■□□□ 1.09
CD55-202ENST00000343420 DDNO94850 711 aaPredicted RBP21.83■■□□□ 1.09
CD55-202ENST00000343420 TMX4Q9H1E5 349 aaPredicted RBP21.83■■□□□ 1.09
CD55-202ENST00000343420 TCERG1O14776 1098 aaKnown RBP21.82■■□□□ 1.08
CD55-202ENST00000343420 BBOX1O75936 387 aa21.82■■□□□ 1.08
CD55-202ENST00000343420 DDX46Q7L014 1031 aaKnown RBP21.82■■□□□ 1.08
CD55-202ENST00000343420 ATP6V0A2Q9Y487 856 aa21.82■■□□□ 1.08
CD55-202ENST00000343420 SCN4AP35499 1836 aa21.82■■□□□ 1.08
CD55-202ENST00000343420 TAF1P21675 1872 aa21.81■■□□□ 1.08
CD55-202ENST00000343420 ZNF428Q96B54 188 aa21.81■■□□□ 1.08
CD55-202ENST00000343420 FAM89AQ96GI7 184 aa21.81■■□□□ 1.08
CD55-202ENST00000343420 FZD9O00144 591 aa21.8■■□□□ 1.08
CD55-202ENST00000343420 DDX58O95786 925 aaKnown RBP21.8■■□□□ 1.08
CD55-202ENST00000343420 JDP2Q8WYK2 163 aa21.8■■□□□ 1.08
CD55-202ENST00000343420 CACNA1FO60840 1977 aa21.79■■□□□ 1.08
CD55-202ENST00000343420 GRAPQ13588 217 aa21.79■■□□□ 1.08
CD55-202ENST00000343420 TWISTNBQ3B726 338 aaPredicted RBP21.79■■□□□ 1.08
CD55-202ENST00000343420 SLC51AQ86UW1 340 aa21.79■■□□□ 1.08
CD55-202ENST00000343420 WDR63Q8IWG1 891 aa21.79■■□□□ 1.08
CD55-202ENST00000343420 GRAPLQ8TC17 118 aaPredicted RBP21.79■■□□□ 1.08
CD55-202ENST00000343420 L3MBTL3Q96JM7 780 aaPredicted RBP21.79■■□□□ 1.08
CD55-202ENST00000343420 ZNF541Q9H0D2 1346 aa21.79■■□□□ 1.08
CD55-202ENST00000343420 SP8Q8IXZ3 490 aa21.78■■□□□ 1.08
CD55-202ENST00000343420 MYD88Q99836 296 aa21.78■■□□□ 1.08
CD55-202ENST00000343420 STK31Q9BXU1 1019 aa21.78■■□□□ 1.08
CD55-202ENST00000343420 SALL2Q9Y467 1007 aaPredicted RBP21.78■■□□□ 1.08
CD55-202ENST00000343420 IQCA1LA6NCM1 817 aa21.77■■□□□ 1.08
CD55-202ENST00000343420 SF3B3Q15393 1217 aaKnown RBP21.77■■□□□ 1.08
CD55-202ENST00000343420 FAM9BQ8IZU0 186 aa21.77■■□□□ 1.08
CD55-202ENST00000343420 ZBTB38Q8NAP3 1195 aaPredicted RBP21.77■■□□□ 1.08
CD55-202ENST00000343420 CCDC191Q8NCU4 936 aa21.77■■□□□ 1.08
CD55-202ENST00000343420 METTL22Q9BUU2 404 aaPredicted RBP21.77■■□□□ 1.08
CD55-202ENST00000343420 IRS4O14654 1257 aaPredicted RBP21.76■■□□□ 1.07
CD55-202ENST00000343420 RTL5Q5HYW3 569 aaPredicted RBP21.76■■□□□ 1.07
CD55-202ENST00000343420 TMC4Q7Z404 712 aa21.76■■□□□ 1.07
CD55-202ENST00000343420 LARGE2Q8N3Y3 721 aa21.76■■□□□ 1.07
CD55-202ENST00000343420 VPS33BQ9H267 617 aa21.76■■□□□ 1.07
CD55-202ENST00000343420 FANCIQ9NVI1 1328 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms