RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 NEK11Q8NG66 645 aa14.52□□□□□ -0.08
SSX2IP-201ENST00000342203 RASSF4Q9H2L5 321 aa14.52□□□□□ -0.09
SSX2IP-201ENST00000342203 ORC3Q9UBD5 711 aaPredicted RBP14.52□□□□□ -0.09
SSX2IP-201ENST00000342203 UNC13AQ9UPW8 1703 aa14.52□□□□□ -0.09
SSX2IP-201ENST00000342203 MNAT1P51948 309 aa14.51□□□□□ -0.09
SSX2IP-201ENST00000342203 RAPGEF4Q8WZA2 1011 aa14.51□□□□□ -0.09
SSX2IP-201ENST00000342203 KIF2CQ99661 725 aa14.51□□□□□ -0.09
SSX2IP-201ENST00000342203 SRRTQ9BXP5 876 aaKnown RBP14.51□□□□□ -0.09
SSX2IP-201ENST00000342203 ZSCAN16Q9H4T2 348 aaPredicted RBP14.51□□□□□ -0.09
SSX2IP-201ENST00000342203 CERS3Q8IU89 383 aa14.51□□□□□ -0.09
SSX2IP-201ENST00000342203 MRPS27Q92552 414 aaKnown RBP14.51□□□□□ -0.09
SSX2IP-201ENST00000342203 DACH1Q9UI36 760 aa14.51□□□□□ -0.09
SSX2IP-201ENST00000342203 U3KPZ7 1027 aaPredicted RBP14.51□□□□□ -0.09
SSX2IP-201ENST00000342203 A0A087WWV3 80 aa14.51□□□□□ -0.09
SSX2IP-201ENST00000342203 CCDC144CPQ8IYA2 1237 aa14.51□□□□□ -0.09
SSX2IP-201ENST00000342203 GBP3Q9H0R5 595 aa14.51□□□□□ -0.09
SSX2IP-201ENST00000342203 FBXO31Q5XUX0 539 aaPredicted RBP14.51□□□□□ -0.09
SSX2IP-201ENST00000342203 GOLGA8BA8MQT2 603 aa14.51□□□□□ -0.09
SSX2IP-201ENST00000342203 DNA2P51530 1060 aa14.51□□□□□ -0.09
SSX2IP-201ENST00000342203 CDR1P51861 262 aa14.51□□□□□ -0.09
SSX2IP-201ENST00000342203 TTC6Q86TZ1 520 aa14.51□□□□□ -0.09
SSX2IP-201ENST00000342203 VPS53Q5VIR6 699 aa14.5□□□□□ -0.09
SSX2IP-201ENST00000342203 ZBTB22O15209 634 aa14.5□□□□□ -0.09
SSX2IP-201ENST00000342203 SGSM2O43147 1006 aa14.5□□□□□ -0.09
SSX2IP-201ENST00000342203 CCDC181Q5TID7 509 aa14.5□□□□□ -0.09
SSX2IP-201ENST00000342203 GCC2Q8IWJ2 1684 aa14.5□□□□□ -0.09
SSX2IP-201ENST00000342203 WDR62O43379 1518 aa14.5□□□□□ -0.09
SSX2IP-201ENST00000342203 PLEKHO1Q53GL0 409 aaPredicted RBP14.5□□□□□ -0.09
SSX2IP-201ENST00000342203 RUFY3Q7L099 469 aa14.5□□□□□ -0.09
SSX2IP-201ENST00000342203 LEO1Q8WVC0 666 aaPredicted RBP14.5□□□□□ -0.09
SSX2IP-201ENST00000342203 CCDC47Q96A33 483 aaKnown RBP14.5□□□□□ -0.09
SSX2IP-201ENST00000342203 LZTFL1Q9NQ48 299 aa14.5□□□□□ -0.09
SSX2IP-201ENST00000342203 ZNHIT6Q9NWK9 470 aaKnown RBP14.5□□□□□ -0.09
SSX2IP-201ENST00000342203 MPRIPQ6WCQ1 1025 aa14.5□□□□□ -0.09
SSX2IP-201ENST00000342203 KIAA1328Q86T90 577 aa14.5□□□□□ -0.09
SSX2IP-201ENST00000342203 ZDHHC9Q9Y397 364 aa14.5□□□□□ -0.09
SSX2IP-201ENST00000342203 GRIN2AQ12879 1464 aa14.5□□□□□ -0.09
SSX2IP-201ENST00000342203 SNRKQ9NRH2 765 aa14.49□□□□□ -0.09
SSX2IP-201ENST00000342203 NCKAP5LQ9HCH0 1330 aa14.49□□□□□ -0.09
SSX2IP-201ENST00000342203 RHOXF2BP0C7M4 288 aa14.49□□□□□ -0.09
SSX2IP-201ENST00000342203 TTC39AQ5SRH9 613 aa14.49□□□□□ -0.09
SSX2IP-201ENST00000342203 UNC5CLQ8IV45 518 aa14.49□□□□□ -0.09
SSX2IP-201ENST00000342203 RHOXF2Q9BQY4 288 aa14.49□□□□□ -0.09
SSX2IP-201ENST00000342203 GOLIM4O00461 696 aa14.49□□□□□ -0.09
SSX2IP-201ENST00000342203 USP8P40818 1118 aa14.49□□□□□ -0.09
SSX2IP-201ENST00000342203 EIF4A2Q14240 407 aaKnown RBP14.49□□□□□ -0.09
SSX2IP-201ENST00000342203 MAP3K2Q9Y2U5 619 aa14.49□□□□□ -0.09
SSX2IP-201ENST00000342203 IFT140Q96RY7 1462 aa14.49□□□□□ -0.09
SSX2IP-201ENST00000342203 CTTNBP2Q8WZ74 1663 aa14.49□□□□□ -0.09
SSX2IP-201ENST00000342203 WDR7Q9Y4E6 1490 aa14.48□□□□□ -0.09
SSX2IP-201ENST00000342203 TRIM22Q8IYM9 498 aa14.48□□□□□ -0.09
SSX2IP-201ENST00000342203 CACTINQ8WUQ7 758 aaKnown RBP14.48□□□□□ -0.09
SSX2IP-201ENST00000342203 CLSTN2Q9H4D0 955 aa14.48□□□□□ -0.09
SSX2IP-201ENST00000342203 PHAXQ9H814 394 aaKnown RBP14.48□□□□□ -0.09
SSX2IP-201ENST00000342203 JAK2O60674 1132 aa14.48□□□□□ -0.09
SSX2IP-201ENST00000342203 NR1I2O75469 434 aa14.48□□□□□ -0.09
SSX2IP-201ENST00000342203 HSPA4P34932 840 aa14.48□□□□□ -0.09
SSX2IP-201ENST00000342203 SYKP43405 635 aa14.48□□□□□ -0.09
SSX2IP-201ENST00000342203 MTMR6Q9Y217 621 aa14.48□□□□□ -0.09
SSX2IP-201ENST00000342203 SOS1Q07889 1333 aaPredicted RBP14.48□□□□□ -0.09
SSX2IP-201ENST00000342203 WASLO00401 505 aaPredicted RBP14.48□□□□□ -0.09
SSX2IP-201ENST00000342203 CCDC158Q5M9N0 1113 aa14.48□□□□□ -0.09
SSX2IP-201ENST00000342203 SYCP2Q9BX26 1530 aa14.48□□□□□ -0.09
SSX2IP-201ENST00000342203 FAM107BQ9H098 131 aa14.48□□□□□ -0.09
SSX2IP-201ENST00000342203 MAGEC2Q9UBF1 373 aaPredicted RBP14.48□□□□□ -0.09
SSX2IP-201ENST00000342203 PTPRTO14522 1441 aa14.47□□□□□ -0.09
SSX2IP-201ENST00000342203 RASEFQ8IZ41 740 aa14.47□□□□□ -0.09
SSX2IP-201ENST00000342203 XBP1P17861 261 aa14.47□□□□□ -0.09
SSX2IP-201ENST00000342203 FAM227BQ96M60 508 aa14.47□□□□□ -0.09
SSX2IP-201ENST00000342203 CHPF2Q9P2E5 772 aa14.47□□□□□ -0.09
SSX2IP-201ENST00000342203 ABCC4O15439 1325 aa14.47□□□□□ -0.09
SSX2IP-201ENST00000342203 RAD50Q92878 1312 aa14.47□□□□□ -0.09
SSX2IP-201ENST00000342203 SHTN1A0MZ66 631 aa14.47□□□□□ -0.09
SSX2IP-201ENST00000342203 APOBRQ0VD83 1088 aa14.47□□□□□ -0.09
SSX2IP-201ENST00000342203 IMMTQ16891 758 aaKnown RBP14.47□□□□□ -0.09
SSX2IP-201ENST00000342203 MICALL1Q8N3F8 863 aa14.47□□□□□ -0.09
SSX2IP-201ENST00000342203 ME3Q16798 604 aa14.47□□□□□ -0.09
SSX2IP-201ENST00000342203 CTR9Q6PD62 1173 aa14.47□□□□□ -0.09
SSX2IP-201ENST00000342203 PLCD4Q9BRC7 762 aa14.47□□□□□ -0.09
SSX2IP-201ENST00000342203 RAPGEF6Q8TEU7 1601 aa14.47□□□□□ -0.09
SSX2IP-201ENST00000342203 MATR3P43243 847 aaKnown RBP eCLIP14.47□□□□□ -0.096e-7■■□□□ 14.3
SSX2IP-201ENST00000342203 RNF187Q5TA31 235 aaPredicted RBP14.47□□□□□ -0.09
SSX2IP-201ENST00000342203 MYD88Q99836 296 aa14.47□□□□□ -0.09
SSX2IP-201ENST00000342203 EIF5P55010 431 aaKnown RBP14.46□□□□□ -0.09
SSX2IP-201ENST00000342203 SART3Q15020 963 aaKnown RBP14.46□□□□□ -0.09
SSX2IP-201ENST00000342203 CCDC148Q8NFR7 591 aa14.46□□□□□ -0.09
SSX2IP-201ENST00000342203 RABEP2Q9H5N1 569 aa14.46□□□□□ -0.09
SSX2IP-201ENST00000342203 MTHFSDQ2M296 383 aaKnown RBP14.46□□□□□ -0.09
SSX2IP-201ENST00000342203 OTUD7BQ6GQQ9 843 aa14.46□□□□□ -0.09
SSX2IP-201ENST00000342203 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.46□□□□□ -0.09
SSX2IP-201ENST00000342203 NUP88Q99567 741 aaPredicted RBP14.46□□□□□ -0.09
SSX2IP-201ENST00000342203 IDH1O75874 414 aaKnown RBP14.46□□□□□ -0.09
SSX2IP-201ENST00000342203 CEP126Q9P2H0 1117 aa14.46□□□□□ -0.09
SSX2IP-201ENST00000342203 CTNNA3Q9UI47 895 aa14.46□□□□□ -0.09
SSX2IP-201ENST00000342203 RTL1A6NKG5 1358 aa14.46□□□□□ -0.1
SSX2IP-201ENST00000342203 MRC2Q9UBG0 1479 aa14.46□□□□□ -0.1
SSX2IP-201ENST00000342203 ODF2Q5BJF6 829 aa14.46□□□□□ -0.1
SSX2IP-201ENST00000342203 GIMAP7Q8NHV1 300 aa14.46□□□□□ -0.1
SSX2IP-201ENST00000342203 OAS2P29728 719 aaKnown RBP14.45□□□□□ -0.1
SSX2IP-201ENST00000342203 PPP2R3AQ06190 1150 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms