RNA–Protein interactions for RNA: ENST00000338176.8

RAB28-203, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB28, Length 1,787 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-203ENST00000338176 ANKRD13DQ6ZTN6 518 aa27.11■■□□□ 1.93
RAB28-203ENST00000338176 PPP1R42Q7Z4L9 355 aa27.11■■□□□ 1.93
RAB28-203ENST00000338176 NLRP10Q86W26 655 aa27.11■■□□□ 1.93
RAB28-203ENST00000338176 PLBD2Q8NHP8 589 aa27.1■■□□□ 1.93
RAB28-203ENST00000338176 UTP14AQ9BVJ6 771 aaKnown RBP27.1■■□□□ 1.93
RAB28-203ENST00000338176 C7orf43Q8WVR3 580 aa27.09■■□□□ 1.93
RAB28-203ENST00000338176 CRY2Q49AN0 593 aa27.09■■□□□ 1.93
RAB28-203ENST00000338176 HSP90AB3PQ58FF7 597 aa27.09■■□□□ 1.93
RAB28-203ENST00000338176 SLC51AQ86UW1 340 aa27.09■■□□□ 1.93
RAB28-203ENST00000338176 ATP5J2-PTCD1G3V325 749 aa27.08■■□□□ 1.93
RAB28-203ENST00000338176 LMNB1P20700 586 aa27.08■■□□□ 1.93
RAB28-203ENST00000338176 C1QTNF8P60827 252 aa27.08■■□□□ 1.93
RAB28-203ENST00000338176 IL16Q14005 1332 aa27.07■■□□□ 1.92
RAB28-203ENST00000338176 NCBP3Q53F19 620 aaKnown RBP27.07■■□□□ 1.92
RAB28-203ENST00000338176 SPINK5Q9NQ38 1064 aaPredicted RBP27.07■■□□□ 1.92
RAB28-203ENST00000338176 FANCIQ9NVI1 1328 aa27.06■■□□□ 1.92
RAB28-203ENST00000338176 NMRK2Q9NPI5 230 aa27.06■■□□□ 1.92
RAB28-203ENST00000338176 HCLS1P14317 486 aaPredicted RBP27.05■■□□□ 1.92
RAB28-203ENST00000338176 RIC1Q4ADV7 1423 aa27.05■■□□□ 1.92
RAB28-203ENST00000338176 KIF3CO14782 793 aa27.04■■□□□ 1.92
RAB28-203ENST00000338176 TWISTNBQ3B726 338 aaPredicted RBP27.04■■□□□ 1.92
RAB28-203ENST00000338176 CCDC30Q5VVM6 783 aa27.04■■□□□ 1.92
RAB28-203ENST00000338176 ISCA1Q9BUE6 129 aa27.04■■□□□ 1.92
RAB28-203ENST00000338176 TRMT112Q9UI30 125 aaKnown RBP27.04■■□□□ 1.92
RAB28-203ENST00000338176 WDR63Q8IWG1 891 aa27.04■■□□□ 1.92
RAB28-203ENST00000338176 RPGRQ92834 1020 aaKnown RBP27.04■■□□□ 1.92
RAB28-203ENST00000338176 SLC10A5Q5PT55 438 aa27.03■■□□□ 1.92
RAB28-203ENST00000338176 TIAM2Q8IVF5 1701 aa27.03■■□□□ 1.92
RAB28-203ENST00000338176 LAMB2P55268 1798 aa27.03■■□□□ 1.92
RAB28-203ENST00000338176 ALDH1B1P30837 517 aa27.02■■□□□ 1.92
RAB28-203ENST00000338176 RIC3Q7Z5B4 369 aa27.02■■□□□ 1.92
RAB28-203ENST00000338176 TAOK3Q9H2K8 898 aa27.02■■□□□ 1.92
RAB28-203ENST00000338176 HOXA10P31260 410 aaPredicted RBP27.02■■□□□ 1.92
RAB28-203ENST00000338176 NLRP3Q96P20 1036 aa27.02■■□□□ 1.92
RAB28-203ENST00000338176 GOLGA2Q08379 1002 aa27.01■■□□□ 1.91
RAB28-203ENST00000338176 CCDC93Q567U6 631 aa27.01■■□□□ 1.91
RAB28-203ENST00000338176 RTL5Q5HYW3 569 aaPredicted RBP27.01■■□□□ 1.91
RAB28-203ENST00000338176 SOGA3Q5TF21 947 aa26.99■■□□□ 1.91
RAB28-203ENST00000338176 G2E3Q7L622 706 aa26.99■■□□□ 1.91
RAB28-203ENST00000338176 FAM89AQ96GI7 184 aa26.99■■□□□ 1.91
RAB28-203ENST00000338176 SH3TC1Q8TE82 1336 aa26.99■■□□□ 1.91
RAB28-203ENST00000338176 LTBP3Q9NS15 1303 aa26.99■■□□□ 1.91
RAB28-203ENST00000338176 DICER1Q9UPY3 1922 aaKnown RBP26.99■■□□□ 1.91
RAB28-203ENST00000338176 EXOSC9Q06265 439 aaKnown RBP26.99■■□□□ 1.91
RAB28-203ENST00000338176 RBM17Q96I25 401 aaKnown RBP26.99■■□□□ 1.91
RAB28-203ENST00000338176 MYD88Q99836 296 aa26.99■■□□□ 1.91
RAB28-203ENST00000338176 DDX60Q8IY21 1712 aaKnown RBP26.98■■□□□ 1.91
RAB28-203ENST00000338176 RNF123Q5XPI4 1314 aa26.97■■□□□ 1.91
RAB28-203ENST00000338176 TAF1P21675 1872 aa26.97■■□□□ 1.91
RAB28-203ENST00000338176 CRAMP1Q96RY5 1269 aa26.97■■□□□ 1.91
RAB28-203ENST00000338176 ZNF277Q9NRM2 450 aaPredicted RBP26.97■■□□□ 1.91
RAB28-203ENST00000338176 STK31Q9BXU1 1019 aa26.96■■□□□ 1.91
RAB28-203ENST00000338176 RRAGCQ9HB90 399 aa26.96■■□□□ 1.91
RAB28-203ENST00000338176 SNED1Q8TER0 1413 aa26.95■■□□□ 1.91
RAB28-203ENST00000338176 FKBP4Q02790 459 aaKnown RBP eCLIP26.95■■□□□ 1.9
RAB28-203ENST00000338176 JARID2Q92833 1246 aaPredicted RBP26.95■■□□□ 1.9
RAB28-203ENST00000338176 ABCC4O15439 1325 aa26.95■■□□□ 1.9
RAB28-203ENST00000338176 PPEF1O14829 653 aaPredicted RBP26.94■■□□□ 1.9
RAB28-203ENST00000338176 VAMP4O75379 141 aa26.94■■□□□ 1.9
RAB28-203ENST00000338176 SLC4A2P04920 1241 aa26.94■■□□□ 1.9
RAB28-203ENST00000338176 MAP3K2Q9Y2U5 619 aa26.94■■□□□ 1.9
RAB28-203ENST00000338176 KDM2BQ8NHM5 1336 aa26.94■■□□□ 1.9
RAB28-203ENST00000338176 TRIM28Q13263 835 aaKnown RBP26.94■■□□□ 1.9
RAB28-203ENST00000338176 PI4KAP2A4QPH2 592 aa26.93■■□□□ 1.9
RAB28-203ENST00000338176 RTKN2Q8IZC4 609 aa26.93■■□□□ 1.9
RAB28-203ENST00000338176 PI4KAP1Q8N8J0 262 aa26.93■■□□□ 1.9
RAB28-203ENST00000338176 METTL22Q9BUU2 404 aaPredicted RBP26.93■■□□□ 1.9
RAB28-203ENST00000338176 ZNF521Q96K83 1311 aa26.93■■□□□ 1.9
RAB28-203ENST00000338176 ZC3H4Q9UPT8 1303 aaKnown RBP26.93■■□□□ 1.9
RAB28-203ENST00000338176 GLTPD2A6NH11 291 aa26.92■■□□□ 1.9
RAB28-203ENST00000338176 CHMP4AQ9BY43 222 aa26.92■■□□□ 1.9
RAB28-203ENST00000338176 DDX58O95786 925 aaKnown RBP26.92■■□□□ 1.9
RAB28-203ENST00000338176 COL4A1P02462 1669 aa26.9■■□□□ 1.9
RAB28-203ENST00000338176 KSR2Q6VAB6 950 aa26.9■■□□□ 1.9
RAB28-203ENST00000338176 IRS4O14654 1257 aaPredicted RBP26.89■■□□□ 1.9
RAB28-203ENST00000338176 IGKV5-2P06315 115 aa26.89■■□□□ 1.89
RAB28-203ENST00000338176 MYH16Q9H6N6 1097 aa26.89■■□□□ 1.89
RAB28-203ENST00000338176 DDX46Q7L014 1031 aaKnown RBP26.88■■□□□ 1.89
RAB28-203ENST00000338176 FLIIQ13045 1269 aa26.87■■□□□ 1.89
RAB28-203ENST00000338176 ZBTB38Q8NAP3 1195 aaPredicted RBP26.87■■□□□ 1.89
RAB28-203ENST00000338176 CCDC191Q8NCU4 936 aa26.87■■□□□ 1.89
RAB28-203ENST00000338176 CWC25Q9NXE8 425 aaPredicted RBP26.87■■□□□ 1.89
RAB28-203ENST00000338176 COL4A5P29400 1685 aa26.87■■□□□ 1.89
RAB28-203ENST00000338176 CCER2I3L3R5 266 aa26.86■■□□□ 1.89
RAB28-203ENST00000338176 IARSP41252 1262 aaKnown RBP26.86■■□□□ 1.89
RAB28-203ENST00000338176 ATP6V0A2Q9Y487 856 aa26.86■■□□□ 1.89
RAB28-203ENST00000338176 CEP350Q5VT06 3117 aa26.86■■□□□ 1.89
RAB28-203ENST00000338176 POTECB2RU33 542 aa26.86■■□□□ 1.89
RAB28-203ENST00000338176 DDNO94850 711 aaPredicted RBP26.86■■□□□ 1.89
RAB28-203ENST00000338176 CWF19L2Q2TBE0 894 aaKnown RBP26.86■■□□□ 1.89
RAB28-203ENST00000338176 CC2D2BQ6DHV5 1058 aa26.86■■□□□ 1.89
RAB28-203ENST00000338176 PSMD1Q99460 953 aa26.86■■□□□ 1.89
RAB28-203ENST00000338176 TOMM70O94826 608 aa26.85■■□□□ 1.89
RAB28-203ENST00000338176 GRAPQ13588 217 aa26.85■■□□□ 1.89
RAB28-203ENST00000338176 GRAPLQ8TC17 118 aaPredicted RBP26.85■■□□□ 1.89
RAB28-203ENST00000338176 ZNF541Q9H0D2 1346 aa26.85■■□□□ 1.89
RAB28-203ENST00000338176 SF3B3Q15393 1217 aaKnown RBP26.84■■□□□ 1.89
RAB28-203ENST00000338176 CELF1Q92879 486 aaKnown RBP26.84■■□□□ 1.89
RAB28-203ENST00000338176 PCCAP05165 728 aaPredicted RBP26.84■■□□□ 1.89
RAB28-203ENST00000338176 DPY19L2Q6NUT2 758 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms