RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 RAD50Q92878 1312 aa6.7□□□□□ -1.34
PRPF4B-201ENST00000337659 NID2Q14112 1375 aa6.7□□□□□ -1.34
PRPF4B-201ENST00000337659 EIF5P55010 431 aaKnown RBP6.7□□□□□ -1.34
PRPF4B-201ENST00000337659 BCL2L13Q9BXK5 485 aa6.7□□□□□ -1.34
PRPF4B-201ENST00000337659 MYO5AQ9Y4I1 1855 aaKnown RBP6.7□□□□□ -1.34
PRPF4B-201ENST00000337659 GRM8O00222 908 aa6.69□□□□□ -1.34
PRPF4B-201ENST00000337659 NFATC2IPQ8NCF5 419 aa6.69□□□□□ -1.34
PRPF4B-201ENST00000337659 CABLES1Q8TDN4 633 aa6.69□□□□□ -1.34
PRPF4B-201ENST00000337659 ZMYM6O95789 1325 aa6.69□□□□□ -1.34
PRPF4B-201ENST00000337659 PNMA6EA0A0J9YXQ4 647 aa6.69□□□□□ -1.34
PRPF4B-201ENST00000337659 PCCAP05165 728 aaPredicted RBP6.69□□□□□ -1.34
PRPF4B-201ENST00000337659 ANAPC15P60006 121 aa6.69□□□□□ -1.34
PRPF4B-201ENST00000337659 C14orf37Q86TY3 774 aa6.69□□□□□ -1.34
PRPF4B-201ENST00000337659 ERC1Q8IUD2 1116 aa6.69□□□□□ -1.34
PRPF4B-201ENST00000337659 VGLL2Q8N8G2 317 aa6.69□□□□□ -1.34
PRPF4B-201ENST00000337659 MAP3K15Q6ZN16 1313 aa6.69□□□□□ -1.34
PRPF4B-201ENST00000337659 PAPPA2Q9BXP8 1791 aa6.69□□□□□ -1.34
PRPF4B-201ENST00000337659 DDX58O95786 925 aaKnown RBP6.69□□□□□ -1.34
PRPF4B-201ENST00000337659 FRAT1Q92837 279 aaPredicted RBP6.69□□□□□ -1.34
PRPF4B-201ENST00000337659 CAMKK2Q96RR4 588 aa6.69□□□□□ -1.34
PRPF4B-201ENST00000337659 RPAP1Q9BWH6 1393 aaPredicted RBP6.69□□□□□ -1.34
PRPF4B-201ENST00000337659 DDRGK1Q96HY6 314 aa6.68□□□□□ -1.34
PRPF4B-201ENST00000337659 ARFGEF1Q9Y6D6 1849 aa6.68□□□□□ -1.34
PRPF4B-201ENST00000337659 PDE1AP54750 535 aa6.68□□□□□ -1.34
PRPF4B-201ENST00000337659 MARCH10Q8NA82 808 aaPredicted RBP6.68□□□□□ -1.34
PRPF4B-201ENST00000337659 BTG4Q9NY30 223 aa6.68□□□□□ -1.34
PRPF4B-201ENST00000337659 PRAMEF22A3QJZ6 481 aa6.68□□□□□ -1.34
PRPF4B-201ENST00000337659 SLC10A5Q5PT55 438 aa6.68□□□□□ -1.34
PRPF4B-201ENST00000337659 USPL1Q5W0Q7 1092 aa6.68□□□□□ -1.34
PRPF4B-201ENST00000337659 MIS18AQ9NYP9 233 aa6.68□□□□□ -1.34
PRPF4B-201ENST00000337659 CHRNA2Q15822 529 aa6.67□□□□□ -1.34
PRPF4B-201ENST00000337659 CLEC4GQ6UXB4 293 aa6.67□□□□□ -1.34
PRPF4B-201ENST00000337659 BCL11BQ9C0K0 894 aaPredicted RBP6.67□□□□□ -1.34
PRPF4B-201ENST00000337659 MAP3K2Q9Y2U5 619 aa6.67□□□□□ -1.34
PRPF4B-201ENST00000337659 LOC285556D6RIA3 1793 aa6.67□□□□□ -1.34
PRPF4B-201ENST00000337659 PI4KAP2A4QPH2 592 aa6.67□□□□□ -1.34
PRPF4B-201ENST00000337659 HMGB2P26583 209 aaKnown RBP6.67□□□□□ -1.34
PRPF4B-201ENST00000337659 PI4KAP1Q8N8J0 262 aa6.67□□□□□ -1.34
PRPF4B-201ENST00000337659 KIF1BPQ96EK5 621 aa6.67□□□□□ -1.34
PRPF4B-201ENST00000337659 SENP3Q9H4L4 574 aaPredicted RBP6.67□□□□□ -1.34
PRPF4B-201ENST00000337659 USP16Q9Y5T5 823 aa6.67□□□□□ -1.34
PRPF4B-201ENST00000337659 NBPF7P0C2Y1 421 aaPredicted RBP6.67□□□□□ -1.34
PRPF4B-201ENST00000337659 CABP4P57796 275 aa6.67□□□□□ -1.34
PRPF4B-201ENST00000337659 GIGYF2Q6Y7W6 1299 aaKnown RBP6.67□□□□□ -1.34
PRPF4B-201ENST00000337659 ATG9AQ7Z3C6 839 aa6.67□□□□□ -1.34
PRPF4B-201ENST00000337659 SUCLG2Q96I99 432 aa6.67□□□□□ -1.34
PRPF4B-201ENST00000337659 NLRP2Q9NX02 1062 aa6.67□□□□□ -1.34
PRPF4B-201ENST00000337659 KLRG2A4D1S0 409 aaPredicted RBP6.66□□□□□ -1.34
PRPF4B-201ENST00000337659 PTPN12Q05209 780 aaKnown RBP6.66□□□□□ -1.34
PRPF4B-201ENST00000337659 TCIRG1Q13488 830 aa6.66□□□□□ -1.34
PRPF4B-201ENST00000337659 CDC45O75419 566 aa6.66□□□□□ -1.34
PRPF4B-201ENST00000337659 SEC24BO95487 1268 aa6.66□□□□□ -1.34
PRPF4B-201ENST00000337659 USP26Q9BXU7 913 aa6.66□□□□□ -1.34
PRPF4B-201ENST00000337659 LRRCC1Q9C099 1032 aa6.66□□□□□ -1.34
PRPF4B-201ENST00000337659 NAV1Q8NEY1 1877 aa6.66□□□□□ -1.34
PRPF4B-201ENST00000337659 PLSCR1O15162 318 aa6.66□□□□□ -1.34
PRPF4B-201ENST00000337659 SASH1O94885 1247 aa6.66□□□□□ -1.34
PRPF4B-201ENST00000337659 SMARCC1Q92922 1105 aaPredicted RBP6.66□□□□□ -1.34
PRPF4B-201ENST00000337659 CAMTA2O94983 1202 aa6.66□□□□□ -1.34
PRPF4B-201ENST00000337659 CYP2E1P05181 493 aaPredicted RBP6.66□□□□□ -1.34
PRPF4B-201ENST00000337659 ANKRD13DQ6ZTN6 518 aa6.66□□□□□ -1.34
PRPF4B-201ENST00000337659 C15orf52Q6ZUT6 534 aaKnown RBP6.66□□□□□ -1.34
PRPF4B-201ENST00000337659 LRRFIP2Q9Y608 721 aaKnown RBP6.66□□□□□ -1.34
PRPF4B-201ENST00000337659 SH3TC1Q8TE82 1336 aa6.65□□□□□ -1.34
PRPF4B-201ENST00000337659 TAF1P21675 1872 aa6.65□□□□□ -1.34
PRPF4B-201ENST00000337659 CANXP27824 592 aaKnown RBP6.65□□□□□ -1.34
PRPF4B-201ENST00000337659 HSP90AB3PQ58FF7 597 aa6.65□□□□□ -1.34
PRPF4B-201ENST00000337659 TBC1D9Q6ZT07 1266 aa6.65□□□□□ -1.34
PRPF4B-201ENST00000337659 TOM1L2Q6ZVM7 507 aa6.65□□□□□ -1.34
PRPF4B-201ENST00000337659 ZBTB38Q8NAP3 1195 aaPredicted RBP6.65□□□□□ -1.34
PRPF4B-201ENST00000337659 UBTFL1P0CB47 393 aaPredicted RBP6.65□□□□□ -1.34
PRPF4B-201ENST00000337659 FGFR2P21802 821 aa6.65□□□□□ -1.34
PRPF4B-201ENST00000337659 SIPA1L1O43166 1804 aa6.65□□□□□ -1.35
PRPF4B-201ENST00000337659 F6X3S4 739 aa6.65□□□□□ -1.35
PRPF4B-201ENST00000337659 ATP5JP18859 108 aa6.65□□□□□ -1.35
PRPF4B-201ENST00000337659 RHPN1Q8TCX5 695 aa6.65□□□□□ -1.35
PRPF4B-201ENST00000337659 FKBP5Q13451 457 aaPredicted RBP6.64□□□□□ -1.35
PRPF4B-201ENST00000337659 PPP1R42Q7Z4L9 355 aa6.64□□□□□ -1.35
PRPF4B-201ENST00000337659 XAGE3Q8WTP9 111 aa6.64□□□□□ -1.35
PRPF4B-201ENST00000337659 KRT27Q7Z3Y8 459 aa6.64□□□□□ -1.35
PRPF4B-201ENST00000337659 C8orf37Q96NL8 207 aa6.64□□□□□ -1.35
PRPF4B-201ENST00000337659 TM6SF1Q9BZW5 370 aa6.64□□□□□ -1.35
PRPF4B-201ENST00000337659 ZNF804BA4D1E1 1349 aa6.64□□□□□ -1.35
PRPF4B-201ENST00000337659 ADRA2BP18089 450 aa6.64□□□□□ -1.35
PRPF4B-201ENST00000337659 SDSP20132 328 aa6.64□□□□□ -1.35
PRPF4B-201ENST00000337659 MX1P20591 662 aa6.64□□□□□ -1.35
PRPF4B-201ENST00000337659 CUL4AQ13619 759 aa6.64□□□□□ -1.35
PRPF4B-201ENST00000337659 TMOD3Q9NYL9 352 aa6.64□□□□□ -1.35
PRPF4B-201ENST00000337659 USP35Q9P2H5 1018 aa6.64□□□□□ -1.35
PRPF4B-201ENST00000337659 CIZ1Q9ULV3 898 aaPredicted RBP6.64□□□□□ -1.35
PRPF4B-201ENST00000337659 EPHA10Q5JZY3 1008 aa6.63□□□□□ -1.35
PRPF4B-201ENST00000337659 SGIP1Q9BQI5 828 aa6.63□□□□□ -1.35
PRPF4B-201ENST00000337659 UBN2Q6ZU65 1347 aa6.63□□□□□ -1.35
PRPF4B-201ENST00000337659 WDR19Q8NEZ3 1342 aa6.63□□□□□ -1.35
PRPF4B-201ENST00000337659 NTSR2O95665 410 aa6.63□□□□□ -1.35
PRPF4B-201ENST00000337659 CHMLP26374 656 aa6.63□□□□□ -1.35
PRPF4B-201ENST00000337659 LTV1Q96GA3 475 aaPredicted RBP6.63□□□□□ -1.35
PRPF4B-201ENST00000337659 AGXT2Q9BYV1 514 aa6.63□□□□□ -1.35
PRPF4B-201ENST00000337659 BICC1Q9H694 974 aaKnown RBP6.63□□□□□ -1.35
PRPF4B-201ENST00000337659 LAS1LQ9Y4W2 734 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms