RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 SPC24Q8NBT2 197 aa23.79■■□□□ 1.4
CDCA4-201ENST00000336219 KCNB2Q92953 911 aa23.79■■□□□ 1.4
CDCA4-201ENST00000336219 EVI5LQ96CN4 794 aa23.79■■□□□ 1.4
CDCA4-201ENST00000336219 MTERF4Q7Z6M4 381 aaKnown RBP23.78■■□□□ 1.4
CDCA4-201ENST00000336219 LINS1Q8NG48 757 aa23.78■■□□□ 1.4
CDCA4-201ENST00000336219 ANKRD24Q8TF21 1146 aa23.78■■□□□ 1.4
CDCA4-201ENST00000336219 JAKMIP1Q96N16 626 aaKnown RBP23.78■■□□□ 1.4
CDCA4-201ENST00000336219 MTMR6Q9Y217 621 aa23.78■■□□□ 1.4
CDCA4-201ENST00000336219 CHMP3Q9Y3E7 222 aa23.78■■□□□ 1.4
CDCA4-201ENST00000336219 ST3GAL1Q11201 340 aa23.78■■□□□ 1.4
CDCA4-201ENST00000336219 COL9A3Q14050 684 aaPredicted RBP23.78■■□□□ 1.4
CDCA4-201ENST00000336219 VPS53Q5VIR6 699 aa23.78■■□□□ 1.4
CDCA4-201ENST00000336219 PRPF40BQ6NWY9 871 aaKnown RBP23.78■■□□□ 1.4
CDCA4-201ENST00000336219 AACSQ86V21 672 aa23.78■■□□□ 1.4
CDCA4-201ENST00000336219 NECAB1Q8N987 351 aa23.78■■□□□ 1.4
CDCA4-201ENST00000336219 TM6SF1Q9BZW5 370 aa23.78■■□□□ 1.4
CDCA4-201ENST00000336219 KCNF1Q9H3M0 494 aa23.78■■□□□ 1.4
CDCA4-201ENST00000336219 PYCARDQ9ULZ3 195 aa23.78■■□□□ 1.4
CDCA4-201ENST00000336219 VPS37CA5D8V6 355 aaPredicted RBP23.77■■□□□ 1.4
CDCA4-201ENST00000336219 GRM8O00222 908 aa23.77■■□□□ 1.4
CDCA4-201ENST00000336219 LETM1O95202 739 aaPredicted RBP23.77■■□□□ 1.4
CDCA4-201ENST00000336219 ADAMTS7Q9UKP4 1686 aa23.77■■□□□ 1.4
CDCA4-201ENST00000336219 UTYO14607 1347 aa23.77■■□□□ 1.4
CDCA4-201ENST00000336219 KAZALD1Q96I82 304 aa23.77■■□□□ 1.4
CDCA4-201ENST00000336219 SUCLG2Q96I99 432 aa23.77■■□□□ 1.4
CDCA4-201ENST00000336219 ZSWIM6Q9HCJ5 1215 aa23.77■■□□□ 1.4
CDCA4-201ENST00000336219 PDRG1Q9NUG6 133 aa23.76■■□□□ 1.39
CDCA4-201ENST00000336219 NECTIN1Q15223 517 aa23.76■■□□□ 1.39
CDCA4-201ENST00000336219 CCDC171Q6TFL3 1326 aa23.76■■□□□ 1.39
CDCA4-201ENST00000336219 ZNF142P52746 1687 aaPredicted RBP23.75■■□□□ 1.39
CDCA4-201ENST00000336219 SASH1O94885 1247 aa23.75■■□□□ 1.39
CDCA4-201ENST00000336219 PRIMPOLQ96LW4 560 aa23.75■■□□□ 1.39
CDCA4-201ENST00000336219 ORAI2Q96SN7 254 aa23.75■■□□□ 1.39
CDCA4-201ENST00000336219 SPTLC3Q9NUV7 552 aa23.75■■□□□ 1.39
CDCA4-201ENST00000336219 FAM173BQ6P4H8 233 aa23.75■■□□□ 1.39
CDCA4-201ENST00000336219 CCDC94Q9BW85 323 aaPredicted RBP23.75■■□□□ 1.39
CDCA4-201ENST00000336219 BICC1Q9H694 974 aaKnown RBP23.75■■□□□ 1.39
CDCA4-201ENST00000336219 DDX21Q9NR30 783 aaKnown RBP eCLIP23.75■■□□□ 1.39
CDCA4-201ENST00000336219 ATP6V1DQ9Y5K8 247 aa23.75■■□□□ 1.39
CDCA4-201ENST00000336219 CYP46A1Q9Y6A2 500 aa23.75■■□□□ 1.39
CDCA4-201ENST00000336219 LMTK3Q96Q04 1460 aa23.74■■□□□ 1.39
CDCA4-201ENST00000336219 ZSCAN31Q96LW9 406 aaPredicted RBP23.74■■□□□ 1.39
CDCA4-201ENST00000336219 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.74■■□□□ 1.39
CDCA4-201ENST00000336219 DDX58O95786 925 aaKnown RBP23.74■■□□□ 1.39
CDCA4-201ENST00000336219 SH2B1Q9NRF2 756 aaPredicted RBP23.74■■□□□ 1.39
CDCA4-201ENST00000336219 ME3Q16798 604 aa23.73■■□□□ 1.39
CDCA4-201ENST00000336219 EAF2Q96CJ1 260 aaPredicted RBP23.73■■□□□ 1.39
CDCA4-201ENST00000336219 RGPD5Q99666 1765 aa23.73■■□□□ 1.39
CDCA4-201ENST00000336219 HMGN5P82970 282 aaKnown RBP23.73■■□□□ 1.39
CDCA4-201ENST00000336219 FERMT3Q86UX7 667 aa23.73■■□□□ 1.39
CDCA4-201ENST00000336219 AXIN2Q9Y2T1 843 aa23.73■■□□□ 1.39
CDCA4-201ENST00000336219 G3BP1Q13283 466 aaKnown RBP eCLIP23.72■■□□□ 1.39
CDCA4-201ENST00000336219 HIP1O00291 1037 aa23.72■■□□□ 1.39
CDCA4-201ENST00000336219 AIMP1Q12904 312 aaKnown RBP23.72■■□□□ 1.39
CDCA4-201ENST00000336219 PDIA6Q15084 440 aa23.72■■□□□ 1.39
CDCA4-201ENST00000336219 CAMK4Q16566 473 aa23.72■■□□□ 1.39
CDCA4-201ENST00000336219 RBM8AQ9Y5S9 174 aaKnown RBP23.72■■□□□ 1.39
CDCA4-201ENST00000336219 TRPM3Q9HCF6 1732 aaPredicted RBP23.71■■□□□ 1.39
CDCA4-201ENST00000336219 ZKSCAN1P17029 563 aaPredicted RBP23.71■■□□□ 1.39
CDCA4-201ENST00000336219 FAM227BQ96M60 508 aa23.71■■□□□ 1.39
CDCA4-201ENST00000336219 CREB3L3Q68CJ9 461 aa23.71■■□□□ 1.39
CDCA4-201ENST00000336219 MAP4K1Q92918 833 aa23.71■■□□□ 1.39
CDCA4-201ENST00000336219 C5P01031 1676 aa23.7■■□□□ 1.39
CDCA4-201ENST00000336219 GTF2F1P35269 517 aaKnown RBP eCLIP23.7■■□□□ 1.38
CDCA4-201ENST00000336219 NMIQ13287 307 aaPredicted RBP23.7■■□□□ 1.38
CDCA4-201ENST00000336219 LMOD2Q6P5Q4 547 aa23.7■■□□□ 1.38
CDCA4-201ENST00000336219 KIAA1524Q8TCG1 905 aa23.7■■□□□ 1.38
CDCA4-201ENST00000336219 CCDC8Q9H0W5 538 aaPredicted RBP23.7■■□□□ 1.38
CDCA4-201ENST00000336219 SNRKQ9NRH2 765 aa23.7■■□□□ 1.38
CDCA4-201ENST00000336219 SMAP1Q8IYB5 467 aaPredicted RBP23.7■■□□□ 1.38
CDCA4-201ENST00000336219 TCEANC2Q96MN5 208 aa23.7■■□□□ 1.38
CDCA4-201ENST00000336219 IGKV5-2P06315 115 aa23.69■■□□□ 1.38
CDCA4-201ENST00000336219 TTC6Q86TZ1 520 aa23.69■■□□□ 1.38
CDCA4-201ENST00000336219 BCL2L12Q9HB09 334 aa23.69■■□□□ 1.38
CDCA4-201ENST00000336219 TPCN1Q9ULQ1 816 aa23.69■■□□□ 1.38
CDCA4-201ENST00000336219 KIF3AQ9Y496 699 aa23.69■■□□□ 1.38
CDCA4-201ENST00000336219 LIG1P18858 919 aa23.69■■□□□ 1.38
CDCA4-201ENST00000336219 CDC37L1Q7L3B6 337 aa23.69■■□□□ 1.38
CDCA4-201ENST00000336219 TLR7Q9NYK1 1049 aaKnown RBP23.69■■□□□ 1.38
CDCA4-201ENST00000336219 CBX1P83916 185 aa23.68■■□□□ 1.38
CDCA4-201ENST00000336219 SCN11AQ9UI33 1791 aa23.68■■□□□ 1.38
CDCA4-201ENST00000336219 KCNJ4P48050 445 aa23.68■■□□□ 1.38
CDCA4-201ENST00000336219 RIC3Q7Z5B4 369 aa23.67■■□□□ 1.38
CDCA4-201ENST00000336219 LUZP1Q86V48 1076 aa23.67■■□□□ 1.38
CDCA4-201ENST00000336219 SIL1Q9H173 461 aa23.67■■□□□ 1.38
CDCA4-201ENST00000336219 MRC1P22897 1456 aa23.67■■□□□ 1.38
CDCA4-201ENST00000336219 RIOK3O14730 519 aaKnown RBP23.66■■□□□ 1.38
CDCA4-201ENST00000336219 SLC27A2O14975 620 aa23.66■■□□□ 1.38
CDCA4-201ENST00000336219 ATP2B3Q16720 1220 aa23.66■■□□□ 1.38
CDCA4-201ENST00000336219 PPP4R3BQ5MIZ7 849 aa23.66■■□□□ 1.38
CDCA4-201ENST00000336219 ZNF790Q6PG37 636 aa23.66■■□□□ 1.38
CDCA4-201ENST00000336219 LARP1Q6PKG0 1096 aaKnown RBP23.66■■□□□ 1.38
CDCA4-201ENST00000336219 CKAP2LQ8IYA6 745 aa23.66■■□□□ 1.38
CDCA4-201ENST00000336219 BOLA2Q9H3K6 86 aa23.66■■□□□ 1.38
CDCA4-201ENST00000336219 A0A0D9SFI3 127 aa23.66■■□□□ 1.38
CDCA4-201ENST00000336219 CCDC192P0DO97 292 aa23.66■■□□□ 1.38
CDCA4-201ENST00000336219 PTGS1P23219 599 aa23.66■■□□□ 1.38
CDCA4-201ENST00000336219 LARP1BQ659C4 914 aaKnown RBP23.66■■□□□ 1.38
CDCA4-201ENST00000336219 ERBB3P21860 1342 aa23.65■■□□□ 1.38
CDCA4-201ENST00000336219 TAF6LQ9Y6J9 622 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 172.2 ms