RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 RBM8AQ9Y5S9 174 aaKnown RBP19.66■□□□□ 0.74
CDC42EP4-201ENST00000335793 ERC1Q8IUD2 1116 aa19.66■□□□□ 0.74
CDC42EP4-201ENST00000335793 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.66■□□□□ 0.74
CDC42EP4-201ENST00000335793 C17orf53Q8N3J3 647 aaPredicted RBP19.66■□□□□ 0.74
CDC42EP4-201ENST00000335793 AKAP12Q02952 1782 aa19.65■□□□□ 0.74
CDC42EP4-201ENST00000335793 DDX58O95786 925 aaKnown RBP19.65■□□□□ 0.74
CDC42EP4-201ENST00000335793 MCM5P33992 734 aa19.65■□□□□ 0.74
CDC42EP4-201ENST00000335793 TTC41PQ6P2S7 1318 aa19.65■□□□□ 0.74
CDC42EP4-201ENST00000335793 DHX37Q8IY37 1157 aaKnown RBP19.65■□□□□ 0.74
CDC42EP4-201ENST00000335793 EVI5LQ96CN4 794 aa19.64■□□□□ 0.74
CDC42EP4-201ENST00000335793 HYPKQ9NX55 129 aa19.64■□□□□ 0.74
CDC42EP4-201ENST00000335793 AKAP4Q5JQC9 854 aa19.64■□□□□ 0.73
CDC42EP4-201ENST00000335793 KSR2Q6VAB6 950 aa19.64■□□□□ 0.73
CDC42EP4-201ENST00000335793 DRC7Q8IY82 874 aa19.64■□□□□ 0.73
CDC42EP4-201ENST00000335793 TTC14Q96N46 770 aa19.64■□□□□ 0.73
CDC42EP4-201ENST00000335793 TFIP11Q9UBB9 837 aaKnown RBP19.64■□□□□ 0.73
CDC42EP4-201ENST00000335793 NRKQ7Z2Y5 1582 aa19.64■□□□□ 0.73
CDC42EP4-201ENST00000335793 SLC39A6Q13433 755 aa19.64■□□□□ 0.73
CDC42EP4-201ENST00000335793 HSP90B1P14625 803 aaKnown RBP19.63■□□□□ 0.73
CDC42EP4-201ENST00000335793 U2AF2P26368 475 aaKnown RBP eCLIP19.63■□□□□ 0.73
CDC42EP4-201ENST00000335793 NEXNQ0ZGT2 675 aa19.63■□□□□ 0.73
CDC42EP4-201ENST00000335793 NMIQ13287 307 aaPredicted RBP19.63■□□□□ 0.73
CDC42EP4-201ENST00000335793 BLOC1S2Q6QNY1 142 aa19.63■□□□□ 0.73
CDC42EP4-201ENST00000335793 ZSCAN31Q96LW9 406 aaPredicted RBP19.63■□□□□ 0.73
CDC42EP4-201ENST00000335793 KDM4FA0A1W2PPD8 638 aa19.63■□□□□ 0.73
CDC42EP4-201ENST00000335793 PIP4K2AP48426 406 aaPredicted RBP19.63■□□□□ 0.73
CDC42EP4-201ENST00000335793 ME3Q16798 604 aa19.63■□□□□ 0.73
CDC42EP4-201ENST00000335793 RNF20Q5VTR2 975 aa19.63■□□□□ 0.73
CDC42EP4-201ENST00000335793 ZNF710Q8N1W2 664 aa19.63■□□□□ 0.73
CDC42EP4-201ENST00000335793 BICC1Q9H694 974 aaKnown RBP19.63■□□□□ 0.73
CDC42EP4-201ENST00000335793 FOSBP53539 338 aa19.62■□□□□ 0.73
CDC42EP4-201ENST00000335793 CREB3L3Q68CJ9 461 aa19.62■□□□□ 0.73
CDC42EP4-201ENST00000335793 GRM8O00222 908 aa19.62■□□□□ 0.73
CDC42EP4-201ENST00000335793 PSMA5P28066 241 aa19.62■□□□□ 0.73
CDC42EP4-201ENST00000335793 VPS53Q5VIR6 699 aa19.62■□□□□ 0.73
CDC42EP4-201ENST00000335793 CHMP4CQ96CF2 233 aa19.61■□□□□ 0.73
CDC42EP4-201ENST00000335793 EAF2Q96CJ1 260 aaPredicted RBP19.61■□□□□ 0.73
CDC42EP4-201ENST00000335793 SUCLG2Q96I99 432 aa19.61■□□□□ 0.73
CDC42EP4-201ENST00000335793 SH2B1Q9NRF2 756 aaPredicted RBP19.61■□□□□ 0.73
CDC42EP4-201ENST00000335793 RPAP1Q9BWH6 1393 aaPredicted RBP19.61■□□□□ 0.73
CDC42EP4-201ENST00000335793 CCDC171Q6TFL3 1326 aa19.61■□□□□ 0.73
CDC42EP4-201ENST00000335793 RNMTO43148 476 aaKnown RBP19.61■□□□□ 0.73
CDC42EP4-201ENST00000335793 ZC3H6P61129 1189 aaKnown RBP19.61■□□□□ 0.73
CDC42EP4-201ENST00000335793 KRT85P78386 507 aa19.61■□□□□ 0.73
CDC42EP4-201ENST00000335793 KCNH5Q8NCM2 988 aa19.61■□□□□ 0.73
CDC42EP4-201ENST00000335793 EPB41L2O43491 1005 aaKnown RBP19.61■□□□□ 0.73
CDC42EP4-201ENST00000335793 CKAP2LQ8IYA6 745 aa19.61■□□□□ 0.73
CDC42EP4-201ENST00000335793 EDC3Q96F86 508 aaKnown RBP19.61■□□□□ 0.73
CDC42EP4-201ENST00000335793 MTMR6Q9Y217 621 aa19.61■□□□□ 0.73
CDC42EP4-201ENST00000335793 DNAJC2Q99543 621 aaKnown RBP19.6■□□□□ 0.73
CDC42EP4-201ENST00000335793 GIGYF1O75420 1035 aaPredicted RBP19.6■□□□□ 0.73
CDC42EP4-201ENST00000335793 UVSSAQ2YD98 709 aa19.59■□□□□ 0.73
CDC42EP4-201ENST00000335793 TLR7Q9NYK1 1049 aaKnown RBP19.59■□□□□ 0.73
CDC42EP4-201ENST00000335793 NDUFB9Q9Y6M9 179 aa19.59■□□□□ 0.73
CDC42EP4-201ENST00000335793 ALDH1L1O75891 902 aa19.59■□□□□ 0.73
CDC42EP4-201ENST00000335793 HOXB7P09629 217 aa19.59■□□□□ 0.73
CDC42EP4-201ENST00000335793 AMOTQ4VCS5 1084 aa19.59■□□□□ 0.73
CDC42EP4-201ENST00000335793 ANKRD24Q8TF21 1146 aa19.59■□□□□ 0.73
CDC42EP4-201ENST00000335793 NLRP2Q9NX02 1062 aa19.59■□□□□ 0.73
CDC42EP4-201ENST00000335793 TPCN1Q9ULQ1 816 aa19.59■□□□□ 0.73
CDC42EP4-201ENST00000335793 CCDC192P0DO97 292 aa19.59■□□□□ 0.73
CDC42EP4-201ENST00000335793 CEBPZQ03701 1054 aaKnown RBP19.59■□□□□ 0.73
CDC42EP4-201ENST00000335793 BICD2Q8TD16 824 aa19.59■□□□□ 0.73
CDC42EP4-201ENST00000335793 TAOK2Q9UL54 1235 aa19.59■□□□□ 0.73
CDC42EP4-201ENST00000335793 GCP02774 474 aa19.58■□□□□ 0.73
CDC42EP4-201ENST00000335793 CSB-PGBD3P0DP91 1061 aa19.58■□□□□ 0.73
CDC42EP4-201ENST00000335793 NOLC1Q14978 699 aaKnown RBP eCLIP19.58■□□□□ 0.73
CDC42EP4-201ENST00000335793 LINS1Q8NG48 757 aa19.58■□□□□ 0.73
CDC42EP4-201ENST00000335793 SECISBP2LQ93073 1101 aaKnown RBP19.58■□□□□ 0.73
CDC42EP4-201ENST00000335793 ADCY9O60503 1353 aa19.58■□□□□ 0.73
CDC42EP4-201ENST00000335793 HIP1O00291 1037 aa19.58■□□□□ 0.72
CDC42EP4-201ENST00000335793 IRX5P78411 483 aaPredicted RBP19.58■□□□□ 0.72
CDC42EP4-201ENST00000335793 MYD88Q99836 296 aa19.58■□□□□ 0.72
CDC42EP4-201ENST00000335793 ZSWIM6Q9HCJ5 1215 aa19.58■□□□□ 0.72
CDC42EP4-201ENST00000335793 H3BQV1 296 aa19.57■□□□□ 0.72
CDC42EP4-201ENST00000335793 IFFO2Q5TF58 517 aa19.57■□□□□ 0.72
CDC42EP4-201ENST00000335793 DDX11Q96FC9 970 aa19.57■□□□□ 0.72
CDC42EP4-201ENST00000335793 KDM4AO75164 1064 aa19.57■□□□□ 0.72
CDC42EP4-201ENST00000335793 A0A0D9SFI3 127 aa19.57■□□□□ 0.72
CDC42EP4-201ENST00000335793 ERICH4A6NGS2 130 aa19.57■□□□□ 0.72
CDC42EP4-201ENST00000335793 PDCP20941 246 aa19.57■□□□□ 0.72
CDC42EP4-201ENST00000335793 SASH1O94885 1247 aa19.56■□□□□ 0.72
CDC42EP4-201ENST00000335793 CDC37L1Q7L3B6 337 aa19.56■□□□□ 0.72
CDC42EP4-201ENST00000335793 ORAI2Q96SN7 254 aa19.56■□□□□ 0.72
CDC42EP4-201ENST00000335793 NUP62CLQ9H1M0 184 aa19.56■□□□□ 0.72
CDC42EP4-201ENST00000335793 SLC27A2O14975 620 aa19.56■□□□□ 0.72
CDC42EP4-201ENST00000335793 PPFIA3O75145 1194 aa19.56■□□□□ 0.72
CDC42EP4-201ENST00000335793 PDCL2Q8N4E4 241 aa19.56■□□□□ 0.72
CDC42EP4-201ENST00000335793 RAPGEF4Q8WZA2 1011 aa19.56■□□□□ 0.72
CDC42EP4-201ENST00000335793 SPATA32Q96LK8 384 aa19.56■□□□□ 0.72
CDC42EP4-201ENST00000335793 TCHHQ07283 1943 aa19.55■□□□□ 0.72
CDC42EP4-201ENST00000335793 TNMDQ9H2S6 317 aa19.55■□□□□ 0.72
CDC42EP4-201ENST00000335793 NECTIN1Q15223 517 aa19.55■□□□□ 0.72
CDC42EP4-201ENST00000335793 COPS6Q7L5N1 327 aa19.55■□□□□ 0.72
CDC42EP4-201ENST00000335793 LRRC2Q9BYS8 371 aa19.55■□□□□ 0.72
CDC42EP4-201ENST00000335793 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.55■□□□□ 0.72
CDC42EP4-201ENST00000335793 MAP3K11Q16584 847 aa19.54■□□□□ 0.72
CDC42EP4-201ENST00000335793 GOLGA6L6A8MZA4 724 aa19.54■□□□□ 0.72
CDC42EP4-201ENST00000335793 CHAF1AQ13111 956 aaPredicted RBP19.54■□□□□ 0.72
CDC42EP4-201ENST00000335793 XAGE3Q8WTP9 111 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms