RNA–Protein interactions for RNA: ENST00000335223.5

PTRH1-201, Transcript of peptidyl-tRNA hydrolase 1 homolog, humanhuman

TSL 1 (best) BASIC

Gene PTRH1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTRH1-201ENST00000335223 PRPF40BQ6NWY9 871 aaKnown RBP27.34■■□□□ 1.97
PTRH1-201ENST00000335223 NLRP10Q86W26 655 aa27.33■■□□□ 1.97
PTRH1-201ENST00000335223 UTP14AQ9BVJ6 771 aaKnown RBP27.33■■□□□ 1.97
PTRH1-201ENST00000335223 SALL2Q9Y467 1007 aaPredicted RBP27.33■■□□□ 1.97
PTRH1-201ENST00000335223 TWISTNBQ3B726 338 aaPredicted RBP27.32■■□□□ 1.96
PTRH1-201ENST00000335223 TIAM2Q8IVF5 1701 aa27.32■■□□□ 1.96
PTRH1-201ENST00000335223 SOGA3Q5TF21 947 aa27.31■■□□□ 1.96
PTRH1-201ENST00000335223 GOLGA2Q08379 1002 aa27.3■■□□□ 1.96
PTRH1-201ENST00000335223 C9orf131Q5VYM1 1079 aa27.3■■□□□ 1.96
PTRH1-201ENST00000335223 ZNF521Q96K83 1311 aa27.3■■□□□ 1.96
PTRH1-201ENST00000335223 DDX60Q8IY21 1712 aaKnown RBP27.3■■□□□ 1.96
PTRH1-201ENST00000335223 NFKBIEO00221 500 aa27.29■■□□□ 1.96
PTRH1-201ENST00000335223 C21orf2O43822 256 aa27.29■■□□□ 1.96
PTRH1-201ENST00000335223 RASSF7Q02833 373 aa27.29■■□□□ 1.96
PTRH1-201ENST00000335223 SLC10A5Q5PT55 438 aa27.29■■□□□ 1.96
PTRH1-201ENST00000335223 ISCA1Q9BUE6 129 aa27.29■■□□□ 1.96
PTRH1-201ENST00000335223 PHAXQ9H814 394 aaKnown RBP27.29■■□□□ 1.96
PTRH1-201ENST00000335223 LTBP3Q9NS15 1303 aa27.28■■□□□ 1.96
PTRH1-201ENST00000335223 ZC3H4Q9UPT8 1303 aaKnown RBP27.28■■□□□ 1.96
PTRH1-201ENST00000335223 ALDH1B1P30837 517 aa27.28■■□□□ 1.96
PTRH1-201ENST00000335223 C7orf43Q8WVR3 580 aa27.28■■□□□ 1.96
PTRH1-201ENST00000335223 LMNB1P20700 586 aa27.27■■□□□ 1.96
PTRH1-201ENST00000335223 HOXA10P31260 410 aaPredicted RBP27.27■■□□□ 1.96
PTRH1-201ENST00000335223 STK31Q9BXU1 1019 aa27.27■■□□□ 1.96
PTRH1-201ENST00000335223 MYH16Q9H6N6 1097 aa27.27■■□□□ 1.96
PTRH1-201ENST00000335223 RNF181Q9P0P0 153 aa27.27■■□□□ 1.96
PTRH1-201ENST00000335223 SH3TC1Q8TE82 1336 aa27.26■■□□□ 1.95
PTRH1-201ENST00000335223 TRIM28Q13263 835 aaKnown RBP27.26■■□□□ 1.95
PTRH1-201ENST00000335223 GPBP1L1Q9HC44 474 aaPredicted RBP27.26■■□□□ 1.95
PTRH1-201ENST00000335223 RIC3Q7Z5B4 369 aa27.25■■□□□ 1.95
PTRH1-201ENST00000335223 RPGRQ92834 1020 aaKnown RBP27.25■■□□□ 1.95
PTRH1-201ENST00000335223 SPINK5Q9NQ38 1064 aaPredicted RBP27.25■■□□□ 1.95
PTRH1-201ENST00000335223 TRMT112Q9UI30 125 aaKnown RBP27.25■■□□□ 1.95
PTRH1-201ENST00000335223 DDX58O95786 925 aaKnown RBP27.24■■□□□ 1.95
PTRH1-201ENST00000335223 NLRP3Q96P20 1036 aa27.24■■□□□ 1.95
PTRH1-201ENST00000335223 ZNF219Q9P2Y4 722 aaPredicted RBP27.24■■□□□ 1.95
PTRH1-201ENST00000335223 PRELPP51888 382 aa27.23■■□□□ 1.95
PTRH1-201ENST00000335223 CCDC93Q567U6 631 aa27.23■■□□□ 1.95
PTRH1-201ENST00000335223 TAOK3Q9H2K8 898 aa27.23■■□□□ 1.95
PTRH1-201ENST00000335223 C3orf67Q6ZVT6 689 aa27.22■■□□□ 1.95
PTRH1-201ENST00000335223 CRAMP1Q96RY5 1269 aa27.22■■□□□ 1.95
PTRH1-201ENST00000335223 SNED1Q8TER0 1413 aa27.22■■□□□ 1.95
PTRH1-201ENST00000335223 ATP5J2-PTCD1G3V325 749 aa27.21■■□□□ 1.95
PTRH1-201ENST00000335223 EXOSC9Q06265 439 aaKnown RBP27.21■■□□□ 1.95
PTRH1-201ENST00000335223 RBM17Q96I25 401 aaKnown RBP27.21■■□□□ 1.95
PTRH1-201ENST00000335223 VAMP4O75379 141 aa27.2■■□□□ 1.94
PTRH1-201ENST00000335223 ZNF526Q8TF50 670 aaPredicted RBP27.2■■□□□ 1.94
PTRH1-201ENST00000335223 METTL22Q9BUU2 404 aaPredicted RBP27.19■■□□□ 1.94
PTRH1-201ENST00000335223 CC2D2BQ6DHV5 1058 aa27.18■■□□□ 1.94
PTRH1-201ENST00000335223 KSR2Q6VAB6 950 aa27.18■■□□□ 1.94
PTRH1-201ENST00000335223 SLC4A2P04920 1241 aa27.17■■□□□ 1.94
PTRH1-201ENST00000335223 HCLS1P14317 486 aaPredicted RBP27.17■■□□□ 1.94
PTRH1-201ENST00000335223 RTKN2Q8IZC4 609 aa27.17■■□□□ 1.94
PTRH1-201ENST00000335223 SYNE4Q8N205 404 aa27.17■■□□□ 1.94
PTRH1-201ENST00000335223 CCDC191Q8NCU4 936 aa27.17■■□□□ 1.94
PTRH1-201ENST00000335223 MYD88Q99836 296 aa27.17■■□□□ 1.94
PTRH1-201ENST00000335223 TCERG1O14776 1098 aaKnown RBP27.16■■□□□ 1.94
PTRH1-201ENST00000335223 MAP3K2Q9Y2U5 619 aa27.16■■□□□ 1.94
PTRH1-201ENST00000335223 TAF1P21675 1872 aa27.16■■□□□ 1.94
PTRH1-201ENST00000335223 MYH3P11055 1940 aa27.16■■□□□ 1.94
PTRH1-201ENST00000335223 PI4KAP2A4QPH2 592 aa27.15■■□□□ 1.94
PTRH1-201ENST00000335223 FKBP4Q02790 459 aaKnown RBP eCLIP27.15■■□□□ 1.94
PTRH1-201ENST00000335223 DIEXFQ68CQ4 756 aaKnown RBP27.15■■□□□ 1.94
PTRH1-201ENST00000335223 G2E3Q7L622 706 aa27.15■■□□□ 1.94
PTRH1-201ENST00000335223 PI4KAP1Q8N8J0 262 aa27.15■■□□□ 1.94
PTRH1-201ENST00000335223 ZBTB38Q8NAP3 1195 aaPredicted RBP27.15■■□□□ 1.94
PTRH1-201ENST00000335223 FAM89AQ96GI7 184 aa27.15■■□□□ 1.94
PTRH1-201ENST00000335223 ABCC4O15439 1325 aa27.15■■□□□ 1.94
PTRH1-201ENST00000335223 KDM2BQ8NHM5 1336 aa27.15■■□□□ 1.94
PTRH1-201ENST00000335223 LRRC37AA6NMS7 1700 aa27.14■■□□□ 1.94
PTRH1-201ENST00000335223 PPEF1O14829 653 aaPredicted RBP27.14■■□□□ 1.94
PTRH1-201ENST00000335223 FLIIQ13045 1269 aa27.14■■□□□ 1.94
PTRH1-201ENST00000335223 GRIPAP1Q4V328 841 aa27.14■■□□□ 1.94
PTRH1-201ENST00000335223 E9PSI1 815 aa27.13■■□□□ 1.93
PTRH1-201ENST00000335223 OLFM4Q6UX06 510 aa27.13■■□□□ 1.93
PTRH1-201ENST00000335223 CWC25Q9NXE8 425 aaPredicted RBP27.13■■□□□ 1.93
PTRH1-201ENST00000335223 KIF3CO14782 793 aa27.12■■□□□ 1.93
PTRH1-201ENST00000335223 C1QTNF8P60827 252 aa27.12■■□□□ 1.93
PTRH1-201ENST00000335223 PSMD1Q99460 953 aa27.12■■□□□ 1.93
PTRH1-201ENST00000335223 PCCAP05165 728 aaPredicted RBP27.11■■□□□ 1.93
PTRH1-201ENST00000335223 HSP90B1P14625 803 aaKnown RBP27.11■■□□□ 1.93
PTRH1-201ENST00000335223 NEXNQ0ZGT2 675 aa27.11■■□□□ 1.93
PTRH1-201ENST00000335223 SF3B3Q15393 1217 aaKnown RBP27.11■■□□□ 1.93
PTRH1-201ENST00000335223 IRS4O14654 1257 aaPredicted RBP27.1■■□□□ 1.93
PTRH1-201ENST00000335223 DDX46Q7L014 1031 aaKnown RBP27.1■■□□□ 1.93
PTRH1-201ENST00000335223 ZNF428Q96B54 188 aa27.1■■□□□ 1.93
PTRH1-201ENST00000335223 WDR90Q96KV7 1748 aa27.1■■□□□ 1.93
PTRH1-201ENST00000335223 GLTPD2A6NH11 291 aa27.09■■□□□ 1.93
PTRH1-201ENST00000335223 BBOX1O75936 387 aa27.09■■□□□ 1.93
PTRH1-201ENST00000335223 IGKV5-2P06315 115 aa27.09■■□□□ 1.93
PTRH1-201ENST00000335223 ATP6V0A2Q9Y487 856 aa27.09■■□□□ 1.93
PTRH1-201ENST00000335223 FKBP5Q13451 457 aaPredicted RBP27.08■■□□□ 1.93
PTRH1-201ENST00000335223 GRAPQ13588 217 aa27.08■■□□□ 1.93
PTRH1-201ENST00000335223 GRAPLQ8TC17 118 aaPredicted RBP27.08■■□□□ 1.93
PTRH1-201ENST00000335223 NMRK2Q9NPI5 230 aa27.08■■□□□ 1.93
PTRH1-201ENST00000335223 CDHR2Q9BYE9 1310 aa27.08■■□□□ 1.93
PTRH1-201ENST00000335223 SLFN5Q08AF3 891 aa27.07■■□□□ 1.92
PTRH1-201ENST00000335223 RTL5Q5HYW3 569 aaPredicted RBP27.07■■□□□ 1.92
PTRH1-201ENST00000335223 TMC4Q7Z404 712 aa27.07■■□□□ 1.92
PTRH1-201ENST00000335223 DNAAF4Q8WXU2 420 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms