RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 PTH1RQ03431 593 aa19.26■□□□□ 0.67
UPK3B-202ENST00000334348 CEP135Q66GS9 1140 aa19.26■□□□□ 0.67
UPK3B-202ENST00000334348 PRPF40BQ6NWY9 871 aaKnown RBP19.26■□□□□ 0.67
UPK3B-202ENST00000334348 CLIP2Q9UDT6 1046 aa19.26■□□□□ 0.67
UPK3B-202ENST00000334348 NPHP3Q7Z494 1330 aa19.25■□□□□ 0.67
UPK3B-202ENST00000334348 CDC37L1Q7L3B6 337 aa19.25■□□□□ 0.67
UPK3B-202ENST00000334348 TTC41PQ6P2S7 1318 aa19.25■□□□□ 0.67
UPK3B-202ENST00000334348 DIP2AQ14689 1571 aa19.25■□□□□ 0.67
UPK3B-202ENST00000334348 GOLGA6L4A6NEF3 574 aa19.25■□□□□ 0.67
UPK3B-202ENST00000334348 HTATSF1O43719 755 aaKnown RBP19.25■□□□□ 0.67
UPK3B-202ENST00000334348 GLRX3O76003 335 aaKnown RBP19.25■□□□□ 0.67
UPK3B-202ENST00000334348 NECAB1Q8N987 351 aa19.25■□□□□ 0.67
UPK3B-202ENST00000334348 SIRT1Q96EB6 747 aa19.25■□□□□ 0.67
UPK3B-202ENST00000334348 CAVIN2O95810 425 aa19.24■□□□□ 0.67
UPK3B-202ENST00000334348 ZNF165P49910 485 aa19.24■□□□□ 0.67
UPK3B-202ENST00000334348 KRT222Q8N1A0 295 aa19.24■□□□□ 0.67
UPK3B-202ENST00000334348 ZNF397Q8NF99 534 aaPredicted RBP19.24■□□□□ 0.67
UPK3B-202ENST00000334348 NECTIN2Q92692 538 aa19.24■□□□□ 0.67
UPK3B-202ENST00000334348 TPCN1Q9ULQ1 816 aa19.24■□□□□ 0.67
UPK3B-202ENST00000334348 FAM208AQ9UK61 1670 aaKnown RBP19.24■□□□□ 0.67
UPK3B-202ENST00000334348 PRR36Q9H6K5 1346 aa19.24■□□□□ 0.67
UPK3B-202ENST00000334348 TECPR2O15040 1411 aa19.24■□□□□ 0.67
UPK3B-202ENST00000334348 ITSN1Q15811 1721 aa19.24■□□□□ 0.67
UPK3B-202ENST00000334348 PEAK1Q9H792 1746 aa19.24■□□□□ 0.67
UPK3B-202ENST00000334348 CRYBG1Q9Y4K1 1723 aa19.24■□□□□ 0.67
UPK3B-202ENST00000334348 NECTIN1Q15223 517 aa19.24■□□□□ 0.67
UPK3B-202ENST00000334348 TERF2Q15554 542 aa19.24■□□□□ 0.67
UPK3B-202ENST00000334348 N4BP2Q86UW6 1770 aaPredicted RBP19.23■□□□□ 0.67
UPK3B-202ENST00000334348 NEMFO60524 1076 aa19.23■□□□□ 0.67
UPK3B-202ENST00000334348 HSP90AB4PQ58FF6 505 aa19.23■□□□□ 0.67
UPK3B-202ENST00000334348 FERMT3Q86UX7 667 aa19.23■□□□□ 0.67
UPK3B-202ENST00000334348 SPATA32Q96LK8 384 aa19.23■□□□□ 0.67
UPK3B-202ENST00000334348 ADGRL3Q9HAR2 1447 aa19.23■□□□□ 0.67
UPK3B-202ENST00000334348 USP31Q70CQ4 1352 aa19.23■□□□□ 0.67
UPK3B-202ENST00000334348 SRGAP3O43295 1099 aa19.22■□□□□ 0.67
UPK3B-202ENST00000334348 ZKSCAN1P17029 563 aaPredicted RBP19.22■□□□□ 0.67
UPK3B-202ENST00000334348 RBM6P78332 1123 aaKnown RBP19.22■□□□□ 0.67
UPK3B-202ENST00000334348 CCDC144BQ3MJ40 725 aa19.22■□□□□ 0.67
UPK3B-202ENST00000334348 FAM173BQ6P4H8 233 aa19.22■□□□□ 0.67
UPK3B-202ENST00000334348 PROSER2Q86WR7 435 aaPredicted RBP19.22■□□□□ 0.67
UPK3B-202ENST00000334348 CCDC144CPQ8IYA2 1237 aa19.22■□□□□ 0.67
UPK3B-202ENST00000334348 FAM53CQ9NYF3 392 aa19.22■□□□□ 0.67
UPK3B-202ENST00000334348 KDRP35968 1356 aa19.22■□□□□ 0.67
UPK3B-202ENST00000334348 LRRC8AQ8IWT6 810 aa19.21■□□□□ 0.67
UPK3B-202ENST00000334348 LEO1Q8WVC0 666 aaPredicted RBP19.21■□□□□ 0.67
UPK3B-202ENST00000334348 SARM1Q6SZW1 724 aa19.21■□□□□ 0.67
UPK3B-202ENST00000334348 DNAJC25Q9H1X3 360 aa19.21■□□□□ 0.67
UPK3B-202ENST00000334348 NUTM2FA1L443 756 aa19.2■□□□□ 0.66
UPK3B-202ENST00000334348 KMT5BQ4FZB7 885 aa19.2■□□□□ 0.66
UPK3B-202ENST00000334348 NYAP1Q6ZVC0 841 aa19.2■□□□□ 0.66
UPK3B-202ENST00000334348 BBXQ8WY36 941 aaPredicted RBP19.2■□□□□ 0.66
UPK3B-202ENST00000334348 ZNF592Q92610 1267 aa19.2■□□□□ 0.66
UPK3B-202ENST00000334348 CCDC66A2RUB6 948 aa19.19■□□□□ 0.66
UPK3B-202ENST00000334348 NR1I2O75469 434 aa19.19■□□□□ 0.66
UPK3B-202ENST00000334348 PSMA5P28066 241 aa19.19■□□□□ 0.66
UPK3B-202ENST00000334348 MRFAP1L1Q96HT8 127 aa19.19■□□□□ 0.66
UPK3B-202ENST00000334348 TMEM51Q9NW97 253 aa19.19■□□□□ 0.66
UPK3B-202ENST00000334348 TFIP11Q9UBB9 837 aaKnown RBP19.19■□□□□ 0.66
UPK3B-202ENST00000334348 GTF2E1P29083 439 aaPredicted RBP19.19■□□□□ 0.66
UPK3B-202ENST00000334348 PTPN14Q15678 1187 aa19.19■□□□□ 0.66
UPK3B-202ENST00000334348 SLFNL1Q499Z3 407 aa19.19■□□□□ 0.66
UPK3B-202ENST00000334348 CREB3L3Q68CJ9 461 aa19.19■□□□□ 0.66
UPK3B-202ENST00000334348 ERO1AQ96HE7 468 aa19.19■□□□□ 0.66
UPK3B-202ENST00000334348 ZNF215Q9UL58 517 aaPredicted RBP19.19■□□□□ 0.66
UPK3B-202ENST00000334348 TMEM94Q12767 1356 aa19.19■□□□□ 0.66
UPK3B-202ENST00000334348 FAM193AP78312 1265 aa19.18■□□□□ 0.66
UPK3B-202ENST00000334348 ANKRD1Q15327 319 aa19.18■□□□□ 0.66
UPK3B-202ENST00000334348 BABAM1Q9NWV8 329 aa19.18■□□□□ 0.66
UPK3B-202ENST00000334348 RBM8AQ9Y5S9 174 aaKnown RBP19.18■□□□□ 0.66
UPK3B-202ENST00000334348 IQCB1Q15051 598 aa19.18■□□□□ 0.66
UPK3B-202ENST00000334348 DDX54Q8TDD1 881 aaKnown RBP19.18■□□□□ 0.66
UPK3B-202ENST00000334348 ALDH8A1Q9H2A2 487 aaPredicted RBP19.18■□□□□ 0.66
UPK3B-202ENST00000334348 GIGYF1O75420 1035 aaPredicted RBP19.17■□□□□ 0.66
UPK3B-202ENST00000334348 C14orf37Q86TY3 774 aa19.17■□□□□ 0.66
UPK3B-202ENST00000334348 MAP4K1Q92918 833 aa19.17■□□□□ 0.66
UPK3B-202ENST00000334348 PGBD1Q96JS3 809 aa19.17■□□□□ 0.66
UPK3B-202ENST00000334348 ECHDC1Q9NTX5 307 aa19.17■□□□□ 0.66
UPK3B-202ENST00000334348 LRRC37A3O60309 1634 aa19.17■□□□□ 0.66
UPK3B-202ENST00000334348 GOLGA6L19H0YKK7 550 aa19.17■□□□□ 0.66
UPK3B-202ENST00000334348 CACNA1FO60840 1977 aa19.17■□□□□ 0.66
UPK3B-202ENST00000334348 ACEP12821 1306 aa19.17■□□□□ 0.66
UPK3B-202ENST00000334348 LARP1Q6PKG0 1096 aaKnown RBP19.17■□□□□ 0.66
UPK3B-202ENST00000334348 IGSF1Q8N6C5 1336 aa19.17■□□□□ 0.66
UPK3B-202ENST00000334348 BICD2Q8TD16 824 aa19.17■□□□□ 0.66
UPK3B-202ENST00000334348 PHAXQ9H814 394 aaKnown RBP19.17■□□□□ 0.66
UPK3B-202ENST00000334348 NALCNQ8IZF0 1738 aa19.16■□□□□ 0.66
UPK3B-202ENST00000334348 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.16■□□□□ 0.66
UPK3B-202ENST00000334348 USP27XA6NNY8 438 aa19.16■□□□□ 0.66
UPK3B-202ENST00000334348 GNAT3A8MTJ3 354 aa19.16■□□□□ 0.66
UPK3B-202ENST00000334348 CLASRPQ8N2M8 674 aaKnown RBP19.16■□□□□ 0.66
UPK3B-202ENST00000334348 EVI5LQ96CN4 794 aa19.16■□□□□ 0.66
UPK3B-202ENST00000334348 KCND1Q9NSA2 647 aa19.16■□□□□ 0.66
UPK3B-202ENST00000334348 NWD1Q149M9 1564 aa19.16■□□□□ 0.66
UPK3B-202ENST00000334348 NBPF7P0C2Y1 421 aaPredicted RBP19.15■□□□□ 0.66
UPK3B-202ENST00000334348 SKILP12757 684 aa19.15■□□□□ 0.66
UPK3B-202ENST00000334348 EYA1Q99502 592 aa19.15■□□□□ 0.66
UPK3B-202ENST00000334348 PLEKHG3A1L390 1219 aa19.15■□□□□ 0.66
UPK3B-202ENST00000334348 HDGFL1Q5TGJ6 251 aa19.15■□□□□ 0.66
UPK3B-202ENST00000334348 FBXO38Q6PIJ6 1188 aa19.15■□□□□ 0.66
UPK3B-202ENST00000334348 CREBRFQ8IUR6 639 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms