RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 RUFY2Q8WXA3 655 aa22.82■■□□□ 1.24
RFTN1-201ENST00000334133 INTS4Q96HW7 963 aaKnown RBP22.82■■□□□ 1.24
RFTN1-201ENST00000334133 SPATA31A3Q5VYP0 1347 aa22.81■■□□□ 1.24
RFTN1-201ENST00000334133 A0A087WZG4 1122 aa22.81■■□□□ 1.24
RFTN1-201ENST00000334133 PRDM11Q9NQV5 511 aa22.81■■□□□ 1.24
RFTN1-201ENST00000334133 A0A0D9SFI3 127 aa22.81■■□□□ 1.24
RFTN1-201ENST00000334133 SYCE3A1L190 88 aa22.81■■□□□ 1.24
RFTN1-201ENST00000334133 ISY1Q9ULR0 285 aaKnown RBP22.81■■□□□ 1.24
RFTN1-201ENST00000334133 TAF6LQ9Y6J9 622 aa22.8■■□□□ 1.24
RFTN1-201ENST00000334133 SCN11AQ9UI33 1791 aa22.8■■□□□ 1.24
RFTN1-201ENST00000334133 ERBB4Q15303 1308 aa22.8■■□□□ 1.24
RFTN1-201ENST00000334133 TNS3Q68CZ2 1445 aa22.8■■□□□ 1.24
RFTN1-201ENST00000334133 GADD45BO75293 160 aaPredicted RBP22.8■■□□□ 1.24
RFTN1-201ENST00000334133 TFCP2Q12800 502 aa22.8■■□□□ 1.24
RFTN1-201ENST00000334133 CCDC83Q8IWF9 413 aa22.8■■□□□ 1.24
RFTN1-201ENST00000334133 RBSNQ9H1K0 784 aa22.8■■□□□ 1.24
RFTN1-201ENST00000334133 RBM8AQ9Y5S9 174 aaKnown RBP22.8■■□□□ 1.24
RFTN1-201ENST00000334133 STRN4Q9NRL3 753 aa22.79■■□□□ 1.24
RFTN1-201ENST00000334133 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.79■■□□□ 1.24
RFTN1-201ENST00000334133 ZNF330Q9Y3S2 320 aaPredicted RBP22.79■■□□□ 1.24
RFTN1-201ENST00000334133 TRIM44Q96DX7 344 aaPredicted RBP22.78■■□□□ 1.24
RFTN1-201ENST00000334133 LIMCH1Q9UPQ0 1083 aa22.78■■□□□ 1.24
RFTN1-201ENST00000334133 A1BGP04217 495 aa22.78■■□□□ 1.24
RFTN1-201ENST00000334133 TTLL7Q6ZT98 887 aa22.78■■□□□ 1.24
RFTN1-201ENST00000334133 BRINP3Q76B58 766 aa22.78■■□□□ 1.24
RFTN1-201ENST00000334133 NECAB1Q8N987 351 aa22.78■■□□□ 1.24
RFTN1-201ENST00000334133 CCDC171Q6TFL3 1326 aa22.78■■□□□ 1.24
RFTN1-201ENST00000334133 NBPF26B4DH59 902 aa22.77■■□□□ 1.24
RFTN1-201ENST00000334133 NBPF14Q5TI25 921 aa22.77■■□□□ 1.24
RFTN1-201ENST00000334133 NBPF10Q6P3W6 841 aaKnown RBP22.77■■□□□ 1.24
RFTN1-201ENST00000334133 NBPF15Q8N660 670 aa22.77■■□□□ 1.24
RFTN1-201ENST00000334133 IL17RAQ96F46 866 aa22.77■■□□□ 1.24
RFTN1-201ENST00000334133 PDRG1Q9NUG6 133 aa22.77■■□□□ 1.24
RFTN1-201ENST00000334133 PTPN12Q05209 780 aaKnown RBP22.77■■□□□ 1.23
RFTN1-201ENST00000334133 ZNF589Q86UQ0 364 aaPredicted RBP22.77■■□□□ 1.23
RFTN1-201ENST00000334133 DBNLQ9UJU6 430 aaKnown RBP22.77■■□□□ 1.23
RFTN1-201ENST00000334133 ZNF445P59923 1031 aa22.76■■□□□ 1.23
RFTN1-201ENST00000334133 DNAJC2Q99543 621 aaKnown RBP22.76■■□□□ 1.23
RFTN1-201ENST00000334133 ZBTB3Q9H5J0 574 aa22.76■■□□□ 1.23
RFTN1-201ENST00000334133 ADAMTS7Q9UKP4 1686 aa22.76■■□□□ 1.23
RFTN1-201ENST00000334133 RNF214Q8ND24 703 aa22.76■■□□□ 1.23
RFTN1-201ENST00000334133 COL18A1P39060 1754 aa22.76■■□□□ 1.23
RFTN1-201ENST00000334133 RPAP1Q9BWH6 1393 aaPredicted RBP22.76■■□□□ 1.23
RFTN1-201ENST00000334133 CREB3L3Q68CJ9 461 aa22.75■■□□□ 1.23
RFTN1-201ENST00000334133 LMBR1LQ6UX01 489 aa22.75■■□□□ 1.23
RFTN1-201ENST00000334133 NECTIN1Q15223 517 aa22.75■■□□□ 1.23
RFTN1-201ENST00000334133 SMC3Q9UQE7 1217 aa22.75■■□□□ 1.23
RFTN1-201ENST00000334133 USP48Q86UV5 1035 aa22.74■■□□□ 1.23
RFTN1-201ENST00000334133 DBNDD2Q9BQY9 259 aa22.74■■□□□ 1.23
RFTN1-201ENST00000334133 SYT1P21579 422 aa22.74■■□□□ 1.23
RFTN1-201ENST00000334133 RFX5P48382 616 aaPredicted RBP22.74■■□□□ 1.23
RFTN1-201ENST00000334133 CNPY2Q9Y2B0 182 aa22.74■■□□□ 1.23
RFTN1-201ENST00000334133 CYP46A1Q9Y6A2 500 aa22.74■■□□□ 1.23
RFTN1-201ENST00000334133 TCHHQ07283 1943 aa22.74■■□□□ 1.23
RFTN1-201ENST00000334133 EPB41L2O43491 1005 aaKnown RBP22.74■■□□□ 1.23
RFTN1-201ENST00000334133 SLFNL1Q499Z3 407 aa22.74■■□□□ 1.23
RFTN1-201ENST00000334133 ZCRB1Q8TBF4 217 aaKnown RBP22.74■■□□□ 1.23
RFTN1-201ENST00000334133 WDR33Q9C0J8 1336 aaKnown RBP22.74■■□□□ 1.23
RFTN1-201ENST00000334133 ZKSCAN1P17029 563 aaPredicted RBP22.73■■□□□ 1.23
RFTN1-201ENST00000334133 TNNI3KQ59H18 835 aa22.73■■□□□ 1.23
RFTN1-201ENST00000334133 CCDC129Q6ZRS4 1044 aa22.73■■□□□ 1.23
RFTN1-201ENST00000334133 SEC62Q99442 399 aaKnown RBP22.73■■□□□ 1.23
RFTN1-201ENST00000334133 FPGT-TNNI3KV9GXZ4 949 aa22.73■■□□□ 1.23
RFTN1-201ENST00000334133 SLC27A2O14975 620 aa22.71■■□□□ 1.23
RFTN1-201ENST00000334133 GJB2P29033 226 aa22.71■■□□□ 1.23
RFTN1-201ENST00000334133 ME3Q16798 604 aa22.71■■□□□ 1.23
RFTN1-201ENST00000334133 DDX46Q7L014 1031 aaKnown RBP22.71■■□□□ 1.23
RFTN1-201ENST00000334133 ESPNB1AK53 854 aa22.71■■□□□ 1.23
RFTN1-201ENST00000334133 MAP4K1Q92918 833 aa22.71■■□□□ 1.23
RFTN1-201ENST00000334133 NEUROD6Q96NK8 337 aa22.71■■□□□ 1.23
RFTN1-201ENST00000334133 ZSWIM6Q9HCJ5 1215 aa22.71■■□□□ 1.23
RFTN1-201ENST00000334133 COPRSQ9NQ92 184 aa22.71■■□□□ 1.23
RFTN1-201ENST00000334133 CRYBG1Q9Y4K1 1723 aa22.71■■□□□ 1.23
RFTN1-201ENST00000334133 STX6O43752 255 aa22.71■■□□□ 1.23
RFTN1-201ENST00000334133 PLBD2Q8NHP8 589 aa22.71■■□□□ 1.23
RFTN1-201ENST00000334133 ST3GAL1Q11201 340 aa22.7■■□□□ 1.22
RFTN1-201ENST00000334133 ANP32BQ92688 251 aaKnown RBP22.7■■□□□ 1.22
RFTN1-201ENST00000334133 ZNF594Q96JF6 807 aaPredicted RBP22.7■■□□□ 1.22
RFTN1-201ENST00000334133 CCDC85AQ96PX6 553 aaPredicted RBP22.7■■□□□ 1.22
RFTN1-201ENST00000334133 TPCN1Q9ULQ1 816 aa22.7■■□□□ 1.22
RFTN1-201ENST00000334133 FIBPO43427 364 aa22.69■■□□□ 1.22
RFTN1-201ENST00000334133 ZSCAN22P10073 491 aaPredicted RBP22.69■■□□□ 1.22
RFTN1-201ENST00000334133 STK3Q13188 491 aa22.69■■□□□ 1.22
RFTN1-201ENST00000334133 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.69■■□□□ 1.22
RFTN1-201ENST00000334133 VPS37CA5D8V6 355 aaPredicted RBP22.68■■□□□ 1.22
RFTN1-201ENST00000334133 TIMM10P62072 90 aa22.68■■□□□ 1.22
RFTN1-201ENST00000334133 VPS53Q5VIR6 699 aa22.68■■□□□ 1.22
RFTN1-201ENST00000334133 WDR17Q8IZU2 1322 aa22.68■■□□□ 1.22
RFTN1-201ENST00000334133 CASP7P55210 303 aa22.67■■□□□ 1.22
RFTN1-201ENST00000334133 MBD3O95983 291 aa22.67■■□□□ 1.22
RFTN1-201ENST00000334133 LRSAM1Q6UWE0 723 aa22.67■■□□□ 1.22
RFTN1-201ENST00000334133 AFDNP55196 1824 aaKnown RBP22.67■■□□□ 1.22
RFTN1-201ENST00000334133 CCDC173Q0VFZ6 552 aa22.66■■□□□ 1.22
RFTN1-201ENST00000334133 DCCP43146 1447 aa22.66■■□□□ 1.22
RFTN1-201ENST00000334133 HIP1O00291 1037 aa22.66■■□□□ 1.22
RFTN1-201ENST00000334133 EVA1CP58658 441 aa22.66■■□□□ 1.22
RFTN1-201ENST00000334133 RABL6Q3YEC7 729 aaPredicted RBP22.66■■□□□ 1.22
RFTN1-201ENST00000334133 FERMT3Q86UX7 667 aa22.66■■□□□ 1.22
RFTN1-201ENST00000334133 PCDH11XQ9BZA7 1347 aa22.66■■□□□ 1.22
RFTN1-201ENST00000334133 PCDH11YQ9BZA8 1340 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms