RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 PSMD1Q99460 953 aa32.87■■■□□ 2.85
PPP4R4-202ENST00000328839 CREBZFQ9NS37 354 aa32.87■■■□□ 2.85
PPP4R4-202ENST00000328839 HACL1Q9UJ83 578 aa32.87■■■□□ 2.85
PPP4R4-202ENST00000328839 TCERG1O14776 1098 aaKnown RBP32.86■■■□□ 2.85
PPP4R4-202ENST00000328839 ANXA1P04083 346 aa32.86■■■□□ 2.85
PPP4R4-202ENST00000328839 RBM17Q96I25 401 aaKnown RBP32.86■■■□□ 2.85
PPP4R4-202ENST00000328839 HSPA1AP0DMV8 641 aaKnown RBP32.85■■■□□ 2.85
PPP4R4-202ENST00000328839 HSPA1BP0DMV9 641 aaKnown RBP32.85■■■□□ 2.85
PPP4R4-202ENST00000328839 HOXA10P31260 410 aaPredicted RBP32.85■■■□□ 2.85
PPP4R4-202ENST00000328839 NEUROD2Q15784 382 aa32.85■■■□□ 2.85
PPP4R4-202ENST00000328839 CC2D2BQ6DHV5 1058 aa32.85■■■□□ 2.85
PPP4R4-202ENST00000328839 CCDC146Q8IYE0 955 aa32.85■■■□□ 2.85
PPP4R4-202ENST00000328839 NECTIN2Q92692 538 aa32.85■■■□□ 2.85
PPP4R4-202ENST00000328839 CLEC11AQ9Y240 323 aa32.85■■■□□ 2.85
PPP4R4-202ENST00000328839 ANKRD36CQ5JPF3 1778 aa32.85■■■□□ 2.85
PPP4R4-202ENST00000328839 SNED1Q8TER0 1413 aa32.85■■■□□ 2.85
PPP4R4-202ENST00000328839 RNF123Q5XPI4 1314 aa32.84■■■□□ 2.85
PPP4R4-202ENST00000328839 FZD9O00144 591 aa32.84■■■□□ 2.85
PPP4R4-202ENST00000328839 DDX10Q13206 875 aaKnown RBP32.84■■■□□ 2.85
PPP4R4-202ENST00000328839 PDIA6Q15084 440 aa32.84■■■□□ 2.85
PPP4R4-202ENST00000328839 PROSER3Q2NL68 480 aa32.84■■■□□ 2.85
PPP4R4-202ENST00000328839 PARP10Q53GL7 1025 aa32.84■■■□□ 2.85
PPP4R4-202ENST00000328839 BABAM1Q9NWV8 329 aa32.84■■■□□ 2.85
PPP4R4-202ENST00000328839 MKRN1Q9UHC7 482 aaKnown RBP32.84■■■□□ 2.85
PPP4R4-202ENST00000328839 PPEF1O14829 653 aaPredicted RBP32.83■■■□□ 2.85
PPP4R4-202ENST00000328839 MYBBP1AQ9BQG0 1328 aaKnown RBP32.82■■■□□ 2.84
PPP4R4-202ENST00000328839 EPHX2P34913 555 aa32.82■■■□□ 2.84
PPP4R4-202ENST00000328839 C3orf67Q6ZVT6 689 aa32.82■■■□□ 2.84
PPP4R4-202ENST00000328839 LRP10Q7Z4F1 713 aa32.82■■■□□ 2.84
PPP4R4-202ENST00000328839 GPC2Q8N158 579 aa32.81■■■□□ 2.84
PPP4R4-202ENST00000328839 NLRP3Q96P20 1036 aa32.81■■■□□ 2.84
PPP4R4-202ENST00000328839 CRAMP1Q96RY5 1269 aa32.81■■■□□ 2.84
PPP4R4-202ENST00000328839 UTP14AQ9BVJ6 771 aaKnown RBP32.81■■■□□ 2.84
PPP4R4-202ENST00000328839 EIF6P56537 245 aaKnown RBP32.8■■■□□ 2.84
PPP4R4-202ENST00000328839 AIMP1Q12904 312 aaKnown RBP32.8■■■□□ 2.84
PPP4R4-202ENST00000328839 SLC51AQ86UW1 340 aa32.8■■■□□ 2.84
PPP4R4-202ENST00000328839 LAS1LQ9Y4W2 734 aaKnown RBP32.8■■■□□ 2.84
PPP4R4-202ENST00000328839 GJA3Q9Y6H8 435 aa32.8■■■□□ 2.84
PPP4R4-202ENST00000328839 COL4A5P29400 1685 aa32.8■■■□□ 2.84
PPP4R4-202ENST00000328839 ADAMTSL1Q8N6G6 1762 aa32.79■■■□□ 2.84
PPP4R4-202ENST00000328839 PASKQ96RG2 1323 aa32.78■■■□□ 2.84
PPP4R4-202ENST00000328839 LAMB2P55268 1798 aa32.78■■■□□ 2.84
PPP4R4-202ENST00000328839 GRIPAP1Q4V328 841 aa32.78■■■□□ 2.84
PPP4R4-202ENST00000328839 LARGE2Q8N3Y3 721 aa32.78■■■□□ 2.84
PPP4R4-202ENST00000328839 WDR43Q15061 677 aaKnown RBP eCLIP32.77■■■□□ 2.84
PPP4R4-202ENST00000328839 COPS6Q7L5N1 327 aa32.77■■■□□ 2.84
PPP4R4-202ENST00000328839 PNMA8AQ86V59 439 aaPredicted RBP32.77■■■□□ 2.84
PPP4R4-202ENST00000328839 XAGE3Q8WTP9 111 aa32.77■■■□□ 2.84
PPP4R4-202ENST00000328839 TMX4Q9H1E5 349 aaPredicted RBP32.77■■■□□ 2.84
PPP4R4-202ENST00000328839 TNS4Q8IZW8 715 aa32.75■■■□□ 2.83
PPP4R4-202ENST00000328839 KRT24Q2M2I5 525 aa32.74■■■□□ 2.83
PPP4R4-202ENST00000328839 HSP90AB3PQ58FF7 597 aa32.74■■■□□ 2.83
PPP4R4-202ENST00000328839 ITGBL1O95965 494 aaPredicted RBP32.73■■■□□ 2.83
PPP4R4-202ENST00000328839 LMOD1P29536 600 aaPredicted RBP32.73■■■□□ 2.83
PPP4R4-202ENST00000328839 MAP1SQ66K74 1059 aaPredicted RBP32.73■■■□□ 2.83
PPP4R4-202ENST00000328839 RUNDC1Q96C34 613 aa32.73■■■□□ 2.83
PPP4R4-202ENST00000328839 CNTNAP1P78357 1384 aa32.72■■■□□ 2.83
PPP4R4-202ENST00000328839 TMEM88BA6NKF7 163 aa32.72■■■□□ 2.83
PPP4R4-202ENST00000328839 SLC10A5Q5PT55 438 aa32.72■■■□□ 2.83
PPP4R4-202ENST00000328839 NIM1KQ8IY84 436 aa32.72■■■□□ 2.83
PPP4R4-202ENST00000328839 ABCC4O15439 1325 aa32.72■■■□□ 2.83
PPP4R4-202ENST00000328839 CHL1O00533 1208 aa32.71■■■□□ 2.83
PPP4R4-202ENST00000328839 PPIP5K2O43314 1243 aa32.71■■■□□ 2.83
PPP4R4-202ENST00000328839 DDX21Q9NR30 783 aaKnown RBP eCLIP32.71■■■□□ 2.83
PPP4R4-202ENST00000328839 LTBP1Q14766 1721 aa32.71■■■□□ 2.83
PPP4R4-202ENST00000328839 HCLS1P14317 486 aaPredicted RBP32.7■■■□□ 2.83
PPP4R4-202ENST00000328839 NLRP10Q86W26 655 aa32.7■■■□□ 2.83
PPP4R4-202ENST00000328839 CNTROBQ8N137 903 aa32.7■■■□□ 2.83
PPP4R4-202ENST00000328839 TRIM35Q9UPQ4 493 aa32.7■■■□□ 2.83
PPP4R4-202ENST00000328839 ATP6V0A2Q9Y487 856 aa32.7■■■□□ 2.83
PPP4R4-202ENST00000328839 CAPN15O75808 1086 aa32.69■■■□□ 2.82
PPP4R4-202ENST00000328839 CHPF2Q9P2E5 772 aa32.69■■■□□ 2.82
PPP4R4-202ENST00000328839 TRMT112Q9UI30 125 aaKnown RBP32.69■■■□□ 2.82
PPP4R4-202ENST00000328839 TCIRG1Q13488 830 aa32.68■■■□□ 2.82
PPP4R4-202ENST00000328839 AOC3Q16853 763 aa32.68■■■□□ 2.82
PPP4R4-202ENST00000328839 ZNF428Q96B54 188 aa32.68■■■□□ 2.82
PPP4R4-202ENST00000328839 TAF1P21675 1872 aa32.67■■■□□ 2.82
PPP4R4-202ENST00000328839 HDGFL1Q5TGJ6 251 aa32.67■■■□□ 2.82
PPP4R4-202ENST00000328839 ADAMTS8Q9UP79 889 aa32.66■■■□□ 2.82
PPP4R4-202ENST00000328839 SH3TC1Q8TE82 1336 aa32.66■■■□□ 2.82
PPP4R4-202ENST00000328839 SCNN1DP51172 638 aa32.65■■■□□ 2.82
PPP4R4-202ENST00000328839 EPS15P42566 896 aa32.64■■■□□ 2.82
PPP4R4-202ENST00000328839 DDX46Q7L014 1031 aaKnown RBP32.64■■■□□ 2.82
PPP4R4-202ENST00000328839 SUPT20HQ8NEM7 779 aa32.64■■■□□ 2.82
PPP4R4-202ENST00000328839 BBOX1O75936 387 aa32.63■■■□□ 2.81
PPP4R4-202ENST00000328839 VEGFBP49765 207 aa32.63■■■□□ 2.81
PPP4R4-202ENST00000328839 DPP8Q6V1X1 898 aaPredicted RBP32.63■■■□□ 2.81
PPP4R4-202ENST00000328839 DDX60Q8IY21 1712 aaKnown RBP32.62■■■□□ 2.81
PPP4R4-202ENST00000328839 SP8Q8IXZ3 490 aa32.61■■■□□ 2.81
PPP4R4-202ENST00000328839 VPS33BQ9H267 617 aa32.61■■■□□ 2.81
PPP4R4-202ENST00000328839 MPNDQ8N594 471 aa32.6■■■□□ 2.81
PPP4R4-202ENST00000328839 ABT1Q9ULW3 272 aaKnown RBP32.6■■■□□ 2.81
PPP4R4-202ENST00000328839 HOXB7P09629 217 aa32.59■■■□□ 2.81
PPP4R4-202ENST00000328839 GRAPQ13588 217 aa32.59■■■□□ 2.81
PPP4R4-202ENST00000328839 PLBD2Q8NHP8 589 aa32.59■■■□□ 2.81
PPP4R4-202ENST00000328839 GRAPLQ8TC17 118 aaPredicted RBP32.59■■■□□ 2.81
PPP4R4-202ENST00000328839 DBF4Q9UBU7 674 aaPredicted RBP32.59■■■□□ 2.81
PPP4R4-202ENST00000328839 ZNRF3Q9ULT6 936 aa32.59■■■□□ 2.81
PPP4R4-202ENST00000328839 ANKRD13DQ6ZTN6 518 aa32.58■■■□□ 2.81
PPP4R4-202ENST00000328839 USP50Q70EL3 339 aaPredicted RBP32.58■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms