RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 VPS33BQ9H267 617 aa6.46□□□□□ -1.38
LRIT3-201ENST00000327908 ADCY9O60503 1353 aa6.46□□□□□ -1.38
LRIT3-201ENST00000327908 GYS1P13807 737 aa6.46□□□□□ -1.38
LRIT3-201ENST00000327908 TM4SF1P30408 202 aa6.46□□□□□ -1.38
LRIT3-201ENST00000327908 ZNF827Q17R98 1081 aa6.46□□□□□ -1.38
LRIT3-201ENST00000327908 BEND3Q5T5X7 828 aa6.46□□□□□ -1.38
LRIT3-201ENST00000327908 USPL1Q5W0Q7 1092 aa6.46□□□□□ -1.38
LRIT3-201ENST00000327908 DEFB132Q7Z7B7 95 aa6.46□□□□□ -1.38
LRIT3-201ENST00000327908 NLRP10Q86W26 655 aa6.46□□□□□ -1.38
LRIT3-201ENST00000327908 SUPT20HQ8NEM7 779 aa6.46□□□□□ -1.38
LRIT3-201ENST00000327908 NUP98P52948 1817 aa6.46□□□□□ -1.38
LRIT3-201ENST00000327908 C10orf71Q711Q0 1435 aa6.45□□□□□ -1.38
LRIT3-201ENST00000327908 H7C1W4 665 aa6.45□□□□□ -1.38
LRIT3-201ENST00000327908 AIMP1Q12904 312 aaKnown RBP6.45□□□□□ -1.38
LRIT3-201ENST00000327908 GCKRQ14397 625 aa6.45□□□□□ -1.38
LRIT3-201ENST00000327908 TMED8Q6PL24 325 aaPredicted RBP6.45□□□□□ -1.38
LRIT3-201ENST00000327908 COL23A1Q86Y22 540 aaPredicted RBP6.45□□□□□ -1.38
LRIT3-201ENST00000327908 FRAT1Q92837 279 aaPredicted RBP6.45□□□□□ -1.38
LRIT3-201ENST00000327908 TRMT112Q9UI30 125 aaKnown RBP6.45□□□□□ -1.38
LRIT3-201ENST00000327908 AFDNP55196 1824 aaKnown RBP6.45□□□□□ -1.38
LRIT3-201ENST00000327908 TUBGCP6Q96RT7 1819 aa6.45□□□□□ -1.38
LRIT3-201ENST00000327908 ZBTB22O15209 634 aa6.45□□□□□ -1.38
LRIT3-201ENST00000327908 NPR1P16066 1061 aa6.45□□□□□ -1.38
LRIT3-201ENST00000327908 CRAMP1Q96RY5 1269 aa6.45□□□□□ -1.38
LRIT3-201ENST00000327908 SERPINB2P05120 415 aa6.45□□□□□ -1.38
LRIT3-201ENST00000327908 TRIM27P14373 513 aa6.45□□□□□ -1.38
LRIT3-201ENST00000327908 SF3B3Q15393 1217 aaKnown RBP6.45□□□□□ -1.38
LRIT3-201ENST00000327908 ITPRIPQ8IWB1 547 aa6.45□□□□□ -1.38
LRIT3-201ENST00000327908 RAB11FIP3O75154 756 aa6.44□□□□□ -1.38
LRIT3-201ENST00000327908 PHF14O94880 888 aa6.44□□□□□ -1.38
LRIT3-201ENST00000327908 MMP14P50281 582 aa6.44□□□□□ -1.38
LRIT3-201ENST00000327908 MTX1Q13505 466 aa6.44□□□□□ -1.38
LRIT3-201ENST00000327908 RPGRQ92834 1020 aaKnown RBP6.44□□□□□ -1.38
LRIT3-201ENST00000327908 RWDD1Q9H446 243 aaPredicted RBP6.44□□□□□ -1.38
LRIT3-201ENST00000327908 ZBTB3Q9H5J0 574 aa6.44□□□□□ -1.38
LRIT3-201ENST00000327908 MYH14Q7Z406 1995 aaKnown RBP6.44□□□□□ -1.38
LRIT3-201ENST00000327908 SLC4A10Q6U841 1118 aa6.44□□□□□ -1.38
LRIT3-201ENST00000327908 TTLL7Q6ZT98 887 aa6.44□□□□□ -1.38
LRIT3-201ENST00000327908 DDX46Q7L014 1031 aaKnown RBP6.44□□□□□ -1.38
LRIT3-201ENST00000327908 TICAM2Q86XR7 235 aa6.44□□□□□ -1.38
LRIT3-201ENST00000327908 ANKRD2Q9GZV1 360 aa6.44□□□□□ -1.38
LRIT3-201ENST00000327908 TBC1D2BQ9UPU7 963 aa6.44□□□□□ -1.38
LRIT3-201ENST00000327908 H0YIN7 160 aa6.44□□□□□ -1.38
LRIT3-201ENST00000327908 BBOX1O75936 387 aa6.44□□□□□ -1.38
LRIT3-201ENST00000327908 PPP1R1BQ9UD71 204 aaPredicted RBP6.44□□□□□ -1.38
LRIT3-201ENST00000327908 ANKRD18BA2A2Z9 1011 aa6.43□□□□□ -1.38
LRIT3-201ENST00000327908 NTSR2O95665 410 aa6.43□□□□□ -1.38
LRIT3-201ENST00000327908 IGHMBP2P38935 993 aaKnown RBP6.43□□□□□ -1.38
LRIT3-201ENST00000327908 NFIXQ14938 502 aa6.43□□□□□ -1.38
LRIT3-201ENST00000327908 KRT24Q2M2I5 525 aa6.43□□□□□ -1.38
LRIT3-201ENST00000327908 TAF7LQ5H9L4 462 aa6.43□□□□□ -1.38
LRIT3-201ENST00000327908 ILDR2Q71H61 639 aa6.43□□□□□ -1.38
LRIT3-201ENST00000327908 NECTIN2Q92692 538 aa6.43□□□□□ -1.38
LRIT3-201ENST00000327908 MASTLQ96GX5 879 aa6.43□□□□□ -1.38
LRIT3-201ENST00000327908 KLRG2A4D1S0 409 aaPredicted RBP6.43□□□□□ -1.38
LRIT3-201ENST00000327908 POLRMTO00411 1230 aaKnown RBP6.43□□□□□ -1.38
LRIT3-201ENST00000327908 IRS4O14654 1257 aaPredicted RBP6.43□□□□□ -1.38
LRIT3-201ENST00000327908 CIAO1O76071 339 aa6.43□□□□□ -1.38
LRIT3-201ENST00000327908 MMP10P09238 476 aa6.43□□□□□ -1.38
LRIT3-201ENST00000327908 HOXA10P31260 410 aaPredicted RBP6.43□□□□□ -1.38
LRIT3-201ENST00000327908 PROSER3Q2NL68 480 aa6.43□□□□□ -1.38
LRIT3-201ENST00000327908 PHAXQ9H814 394 aaKnown RBP6.43□□□□□ -1.38
LRIT3-201ENST00000327908 ANO8Q9HCE9 1232 aaPredicted RBP6.43□□□□□ -1.38
LRIT3-201ENST00000327908 DUOX1Q9NRD9 1551 aa6.43□□□□□ -1.38
LRIT3-201ENST00000327908 KIF13BQ9NQT8 1826 aa6.43□□□□□ -1.38
LRIT3-201ENST00000327908 GCC1Q96CN9 775 aa6.43□□□□□ -1.38
LRIT3-201ENST00000327908 CTSWP56202 376 aa6.42□□□□□ -1.38
LRIT3-201ENST00000327908 CCDC57Q2TAC2 916 aa6.42□□□□□ -1.38
LRIT3-201ENST00000327908 RABL6Q3YEC7 729 aaPredicted RBP6.42□□□□□ -1.38
LRIT3-201ENST00000327908 PTF1AQ7RTS3 328 aa6.42□□□□□ -1.38
LRIT3-201ENST00000327908 EYA3Q99504 573 aa6.42□□□□□ -1.38
LRIT3-201ENST00000327908 AKAP2Q9Y2D5 859 aa6.42□□□□□ -1.38
LRIT3-201ENST00000327908 IFIT5Q13325 482 aaKnown RBP6.42□□□□□ -1.38
LRIT3-201ENST00000327908 R3HDM1Q15032 1099 aaKnown RBP6.42□□□□□ -1.38
LRIT3-201ENST00000327908 GPATCH3Q96I76 525 aa6.42□□□□□ -1.38
LRIT3-201ENST00000327908 PRAMEF22A3QJZ6 481 aa6.42□□□□□ -1.38
LRIT3-201ENST00000327908 BCAR3O75815 825 aa6.42□□□□□ -1.38
LRIT3-201ENST00000327908 TBC1D9BQ66K14 1250 aa6.42□□□□□ -1.38
LRIT3-201ENST00000327908 G2E3Q7L622 706 aa6.42□□□□□ -1.38
LRIT3-201ENST00000327908 GPR108Q9NPR9 543 aa6.42□□□□□ -1.38
LRIT3-201ENST00000327908 MROH5Q6ZUA9 1318 aa6.42□□□□□ -1.38
LRIT3-201ENST00000327908 ANKRD18AQ8IVF6 992 aa6.41□□□□□ -1.38
LRIT3-201ENST00000327908 TMEM57Q8N5G2 664 aa6.41□□□□□ -1.38
LRIT3-201ENST00000327908 CLUAP1Q96AJ1 413 aa6.41□□□□□ -1.38
LRIT3-201ENST00000327908 BCL2L12Q9HB09 334 aa6.41□□□□□ -1.38
LRIT3-201ENST00000327908 MYH3P11055 1940 aa6.41□□□□□ -1.38
LRIT3-201ENST00000327908 ZC3H4Q9UPT8 1303 aaKnown RBP6.41□□□□□ -1.38
LRIT3-201ENST00000327908 DLEC1Q9Y238 1755 aa6.41□□□□□ -1.38
LRIT3-201ENST00000327908 ABCC12Q96J65 1359 aa6.41□□□□□ -1.38
LRIT3-201ENST00000327908 CSF1RP07333 972 aa6.41□□□□□ -1.38
LRIT3-201ENST00000327908 ATP8B2P98198 1209 aa6.41□□□□□ -1.38
LRIT3-201ENST00000327908 FKBP8Q14318 412 aa6.41□□□□□ -1.38
LRIT3-201ENST00000327908 LRRFIP1Q32MZ4 808 aaKnown RBP6.41□□□□□ -1.38
LRIT3-201ENST00000327908 RTKN2Q8IZC4 609 aa6.41□□□□□ -1.38
LRIT3-201ENST00000327908 ANKRD44Q8N8A2 993 aa6.41□□□□□ -1.38
LRIT3-201ENST00000327908 GRIN3BO60391 1043 aa6.41□□□□□ -1.38
LRIT3-201ENST00000327908 IGKV5-2P06315 115 aa6.41□□□□□ -1.38
LRIT3-201ENST00000327908 IL15P40933 162 aaPredicted RBP6.41□□□□□ -1.38
LRIT3-201ENST00000327908 G3BP1Q13283 466 aaKnown RBP eCLIP6.41□□□□□ -1.38
LRIT3-201ENST00000327908 HDAC1Q13547 482 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms