RNA–Protein interactions for RNA: ENST00000325180.12

GGA1-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene GGA1, Length 2,528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-201ENST00000325180 NIP7Q9Y221 180 aaKnown RBP eCLIP17.43■□□□□ 0.38
GGA1-201ENST00000325180 BCL11AQ9H165 835 aa17.42■□□□□ 0.38
GGA1-201ENST00000325180 MSH5O43196 834 aa17.42■□□□□ 0.38
GGA1-201ENST00000325180 SUSD4Q5VX71 490 aa17.42■□□□□ 0.38
GGA1-201ENST00000325180 CCDC191Q8NCU4 936 aa17.42■□□□□ 0.38
GGA1-201ENST00000325180 GOLGB1Q14789 3259 aaKnown RBP17.42■□□□□ 0.38
GGA1-201ENST00000325180 CASP7P55210 303 aa17.41■□□□□ 0.38
GGA1-201ENST00000325180 COL23A1Q86Y22 540 aaPredicted RBP17.41■□□□□ 0.38
GGA1-201ENST00000325180 CCDC24Q8N4L8 307 aa17.41■□□□□ 0.38
GGA1-201ENST00000325180 PDGFDQ9GZP0 370 aaPredicted RBP17.41■□□□□ 0.38
GGA1-201ENST00000325180 BICC1Q9H694 974 aaKnown RBP17.41■□□□□ 0.38
GGA1-201ENST00000325180 C4AP0C0L4 1744 aa17.4■□□□□ 0.38
GGA1-201ENST00000325180 H7C1W4 665 aa17.4■□□□□ 0.38
GGA1-201ENST00000325180 ILDR2Q71H61 639 aa17.4■□□□□ 0.38
GGA1-201ENST00000325180 CHMP4BQ9H444 224 aaKnown RBP17.4■□□□□ 0.38
GGA1-201ENST00000325180 KDM2BQ8NHM5 1336 aa17.4■□□□□ 0.38
GGA1-201ENST00000325180 USP42Q9H9J4 1324 aaKnown RBP17.4■□□□□ 0.38
GGA1-201ENST00000325180 SRCAPQ6ZRS2 3230 aa17.4■□□□□ 0.38
GGA1-201ENST00000325180 NUTM1Q86Y26 1132 aa17.4■□□□□ 0.38
GGA1-201ENST00000325180 CCDC85AQ96PX6 553 aaPredicted RBP17.4■□□□□ 0.38
GGA1-201ENST00000325180 TRMT112Q9UI30 125 aaKnown RBP17.4■□□□□ 0.38
GGA1-201ENST00000325180 UTYO14607 1347 aa17.4■□□□□ 0.38
GGA1-201ENST00000325180 TRIM28Q13263 835 aaKnown RBP17.39■□□□□ 0.37
GGA1-201ENST00000325180 PPP1R42Q7Z4L9 355 aa17.39■□□□□ 0.37
GGA1-201ENST00000325180 ANKRD44Q8N8A2 993 aa17.39■□□□□ 0.37
GGA1-201ENST00000325180 AAMPQ13685 434 aa17.39■□□□□ 0.37
GGA1-201ENST00000325180 HSP90AB3PQ58FF7 597 aa17.39■□□□□ 0.37
GGA1-201ENST00000325180 SSFA2P28290 1259 aa17.38■□□□□ 0.37
GGA1-201ENST00000325180 UPF1Q92900 1129 aaKnown RBP eCLIP17.38■□□□□ 0.376e-7■■■■□ 21.5
GGA1-201ENST00000325180 TUBGCP6Q96RT7 1819 aa17.38■□□□□ 0.37
GGA1-201ENST00000325180 PNPLA7Q6ZV29 1317 aa17.38■□□□□ 0.37
GGA1-201ENST00000325180 APBB1O00213 710 aa17.38■□□□□ 0.37
GGA1-201ENST00000325180 GYS1P13807 737 aa17.38■□□□□ 0.37
GGA1-201ENST00000325180 RWDD1Q9H446 243 aaPredicted RBP17.38■□□□□ 0.37
GGA1-201ENST00000325180 SLC15A2Q16348 729 aa17.37■□□□□ 0.37
GGA1-201ENST00000325180 ANKRD36CQ5JPF3 1778 aa17.37■□□□□ 0.37
GGA1-201ENST00000325180 BCORQ6W2J9 1755 aa17.37■□□□□ 0.37
GGA1-201ENST00000325180 SRGAP3O43295 1099 aa17.37■□□□□ 0.37
GGA1-201ENST00000325180 HCLS1P14317 486 aaPredicted RBP17.37■□□□□ 0.37
GGA1-201ENST00000325180 ATP8B2P98198 1209 aa17.37■□□□□ 0.37
GGA1-201ENST00000325180 CLEC4GQ6UXB4 293 aa17.37■□□□□ 0.37
GGA1-201ENST00000325180 KLHDC4Q8TBB5 520 aa17.37■□□□□ 0.37
GGA1-201ENST00000325180 ZNF652Q9Y2D9 606 aa17.37■□□□□ 0.37
GGA1-201ENST00000325180 HDAC1Q13547 482 aaPredicted RBP17.36■□□□□ 0.37
GGA1-201ENST00000325180 MSL1Q68DK7 614 aa17.36■□□□□ 0.37
GGA1-201ENST00000325180 RPAP2Q8IXW5 612 aaPredicted RBP17.36■□□□□ 0.37
GGA1-201ENST00000325180 ZBTB38Q8NAP3 1195 aaPredicted RBP17.36■□□□□ 0.37
GGA1-201ENST00000325180 FOXO4P98177 505 aa17.36■□□□□ 0.37
GGA1-201ENST00000325180 NFIXQ14938 502 aa17.36■□□□□ 0.37
GGA1-201ENST00000325180 PCCAP05165 728 aaPredicted RBP17.35■□□□□ 0.37
GGA1-201ENST00000325180 ADRA2BP18089 450 aa17.35■□□□□ 0.37
GGA1-201ENST00000325180 PA2G4Q9UQ80 394 aaKnown RBP17.35■□□□□ 0.37
GGA1-201ENST00000325180 SCN7AQ01118 1682 aa17.35■□□□□ 0.37
GGA1-201ENST00000325180 NTSR2O95665 410 aa17.35■□□□□ 0.37
GGA1-201ENST00000325180 LMBR1LQ6UX01 489 aa17.35■□□□□ 0.37
GGA1-201ENST00000325180 SETDB2Q96T68 719 aa17.35■□□□□ 0.37
GGA1-201ENST00000325180 EXOC6BQ9Y2D4 811 aa17.35■□□□□ 0.37
GGA1-201ENST00000325180 CHMP3Q9Y3E7 222 aa17.35■□□□□ 0.37
GGA1-201ENST00000325180 RGPD3A6NKT7 1758 aaPredicted RBP17.34■□□□□ 0.37
GGA1-201ENST00000325180 RGPD4Q7Z3J3 1758 aa17.34■□□□□ 0.37
GGA1-201ENST00000325180 IRS4O14654 1257 aaPredicted RBP17.34■□□□□ 0.37
GGA1-201ENST00000325180 CENPQQ7L2Z9 268 aaPredicted RBP17.34■□□□□ 0.37
GGA1-201ENST00000325180 UTP14AQ9BVJ6 771 aaKnown RBP17.34■□□□□ 0.37
GGA1-201ENST00000325180 STK32BQ9NY57 414 aa17.34■□□□□ 0.37
GGA1-201ENST00000325180 ERFEQ4G0M1 354 aa17.34■□□□□ 0.37
GGA1-201ENST00000325180 CCDC125Q86Z20 511 aa17.32■□□□□ 0.36
GGA1-201ENST00000325180 C3orf67Q6ZVT6 689 aa17.32■□□□□ 0.36
GGA1-201ENST00000325180 PARP10Q53GL7 1025 aa17.31■□□□□ 0.36
GGA1-201ENST00000325180 SSH3Q8TE77 659 aa17.31■□□□□ 0.36
GGA1-201ENST00000325180 RBM19Q9Y4C8 960 aaKnown RBP17.31■□□□□ 0.36
GGA1-201ENST00000325180 SMARCA5O60264 1052 aaPredicted RBP17.31■□□□□ 0.36
GGA1-201ENST00000325180 NBPF5PQ86XG9 351 aaPredicted RBP17.31■□□□□ 0.36
GGA1-201ENST00000325180 ZNF594Q96JF6 807 aaPredicted RBP17.31■□□□□ 0.36
GGA1-201ENST00000325180 SIL1Q9H173 461 aa17.31■□□□□ 0.36
GGA1-201ENST00000325180 PDZRN3Q9UPQ7 1066 aa17.31■□□□□ 0.36
GGA1-201ENST00000325180 SH3TC1Q8TE82 1336 aa17.31■□□□□ 0.36
GGA1-201ENST00000325180 DDR1Q08345 913 aa17.3■□□□□ 0.36
GGA1-201ENST00000325180 POLA2Q14181 598 aa17.3■□□□□ 0.36
GGA1-201ENST00000325180 DCTPP1Q9H773 170 aa17.3■□□□□ 0.36
GGA1-201ENST00000325180 GTF2E1P29083 439 aaPredicted RBP17.3■□□□□ 0.36
GGA1-201ENST00000325180 ANKRD45Q5TZF3 282 aa17.3■□□□□ 0.36
GGA1-201ENST00000325180 SMC5Q8IY18 1101 aa17.3■□□□□ 0.36
GGA1-201ENST00000325180 SURF6O75683 361 aaKnown RBP17.29■□□□□ 0.36
GGA1-201ENST00000325180 FAM161AQ3B820 660 aa17.29■□□□□ 0.36
GGA1-201ENST00000325180 RABL6Q3YEC7 729 aaPredicted RBP17.29■□□□□ 0.36
GGA1-201ENST00000325180 ABCC12Q96J65 1359 aa17.29■□□□□ 0.36
GGA1-201ENST00000325180 TM4SF1P30408 202 aa17.29■□□□□ 0.36
GGA1-201ENST00000325180 MTX1Q13505 466 aa17.29■□□□□ 0.36
GGA1-201ENST00000325180 IBTKQ9P2D0 1353 aaPredicted RBP17.29■□□□□ 0.36
GGA1-201ENST00000325180 HMMRO75330 724 aa17.28■□□□□ 0.36
GGA1-201ENST00000325180 RGS3P49796 1198 aa17.28■□□□□ 0.36
GGA1-201ENST00000325180 TTLL11Q8NHH1 800 aa17.28■□□□□ 0.36
GGA1-201ENST00000325180 LNPKQ9C0E8 428 aa17.28■□□□□ 0.36
GGA1-201ENST00000325180 GREM2Q9H772 168 aa17.28■□□□□ 0.36
GGA1-201ENST00000325180 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.28■□□□□ 0.36
GGA1-201ENST00000325180 RFX5P48382 616 aaPredicted RBP17.28■□□□□ 0.36
GGA1-201ENST00000325180 CDHR2Q9BYE9 1310 aa17.28■□□□□ 0.36
GGA1-201ENST00000325180 NPHP1O15259 732 aa17.27■□□□□ 0.36
GGA1-201ENST00000325180 C16orf71Q8IYS4 520 aaPredicted RBP17.27■□□□□ 0.36
GGA1-201ENST00000325180 SERPINB2P05120 415 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms