RNA–Protein interactions for RNA: ENST00000324545.8

USP9X-201, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 5 BASIC

Gene USP9X, Length 12,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-201ENST00000324545 CLIP2Q9UDT6 1046 aa8.59□□□□□ -1.03
USP9X-201ENST00000324545 MAP3K11Q16584 847 aa8.59□□□□□ -1.03
USP9X-201ENST00000324545 ACSBG1Q96GR2 724 aa8.59□□□□□ -1.03
USP9X-201ENST00000324545 SFMBT1Q9UHJ3 866 aa8.59□□□□□ -1.03
USP9X-201ENST00000324545 SBNO2Q9Y2G9 1366 aa8.59□□□□□ -1.03
USP9X-201ENST00000324545 LETM1O95202 739 aaPredicted RBP8.59□□□□□ -1.03
USP9X-201ENST00000324545 SFPQP23246 707 aaKnown RBP eCLIP8.59□□□□□ -1.03
USP9X-201ENST00000324545 FAM69CQ0P6D2 419 aa8.59□□□□□ -1.03
USP9X-201ENST00000324545 CWC25Q9NXE8 425 aaPredicted RBP8.59□□□□□ -1.03
USP9X-201ENST00000324545 PDCD7Q8N8D1 485 aaKnown RBP8.59□□□□□ -1.03
USP9X-201ENST00000324545 GNAI1P63096 354 aa8.59□□□□□ -1.03
USP9X-201ENST00000324545 MICU3Q86XE3 530 aa8.59□□□□□ -1.03
USP9X-201ENST00000324545 RFC1P35251 1148 aaPredicted RBP8.59□□□□□ -1.03
USP9X-201ENST00000324545 TWISTNBQ3B726 338 aaPredicted RBP8.59□□□□□ -1.03
USP9X-201ENST00000324545 SPG7Q9UQ90 795 aa8.59□□□□□ -1.03
USP9X-201ENST00000324545 ZEB2O60315 1214 aa8.59□□□□□ -1.03
USP9X-201ENST00000324545 CUL4BQ13620 913 aa8.59□□□□□ -1.03
USP9X-201ENST00000324545 PLEKHO1Q53GL0 409 aaPredicted RBP8.59□□□□□ -1.03
USP9X-201ENST00000324545 CARMIL1Q5VZK9 1371 aa8.59□□□□□ -1.04
USP9X-201ENST00000324545 VGLL3A8MV65 326 aa8.58□□□□□ -1.04
USP9X-201ENST00000324545 PICALMQ13492 652 aa8.58□□□□□ -1.04
USP9X-201ENST00000324545 PTPROQ16827 1216 aa8.58□□□□□ -1.04
USP9X-201ENST00000324545 IMMTQ16891 758 aaKnown RBP8.58□□□□□ -1.04
USP9X-201ENST00000324545 CCT6BQ92526 530 aa8.58□□□□□ -1.04
USP9X-201ENST00000324545 PDCP20941 246 aa8.58□□□□□ -1.04
USP9X-201ENST00000324545 HSPA1LP34931 641 aa8.58□□□□□ -1.04
USP9X-201ENST00000324545 BSPRYQ5W0U4 402 aa8.58□□□□□ -1.04
USP9X-201ENST00000324545 SWAP70Q9UH65 585 aa8.58□□□□□ -1.04
USP9X-201ENST00000324545 MAEAQ7L5Y9 396 aa8.58□□□□□ -1.04
USP9X-201ENST00000324545 EFCAB2Q5VUJ9 269 aa8.58□□□□□ -1.04
USP9X-201ENST00000324545 IFT81Q8WYA0 676 aa8.58□□□□□ -1.04
USP9X-201ENST00000324545 MAFGO15525 162 aa8.58□□□□□ -1.04
USP9X-201ENST00000324545 USP25Q9UHP3 1055 aa8.58□□□□□ -1.04
USP9X-201ENST00000324545 CCDC88CQ9P219 2028 aa8.58□□□□□ -1.04
USP9X-201ENST00000324545 ATF7IPQ6VMQ6 1270 aa8.58□□□□□ -1.04
USP9X-201ENST00000324545 PLCB3Q01970 1234 aa8.58□□□□□ -1.04
USP9X-201ENST00000324545 KARSQ15046 597 aaKnown RBP8.58□□□□□ -1.04
USP9X-201ENST00000324545 ZNF444Q8N0Y2 327 aaPredicted RBP8.58□□□□□ -1.04
USP9X-201ENST00000324545 MBD3O95983 291 aa8.58□□□□□ -1.04
USP9X-201ENST00000324545 TMEM57Q8N5G2 664 aa8.58□□□□□ -1.04
USP9X-201ENST00000324545 FHAD1B1AJZ9 1412 aa8.58□□□□□ -1.04
USP9X-201ENST00000324545 FAM180AQ6UWF9 173 aa8.58□□□□□ -1.04
USP9X-201ENST00000324545 SLC26A6Q9BXS9 759 aa8.58□□□□□ -1.04
USP9X-201ENST00000324545 NAPBQ9H115 298 aa8.58□□□□□ -1.04
USP9X-201ENST00000324545 SSRP1Q08945 709 aaKnown RBP8.57□□□□□ -1.04
USP9X-201ENST00000324545 FRMD3A2A2Y4 597 aa8.57□□□□□ -1.04
USP9X-201ENST00000324545 K7ELQ4 463 aaPredicted RBP8.57□□□□□ -1.04
USP9X-201ENST00000324545 TTC30AQ86WT1 665 aa8.57□□□□□ -1.04
USP9X-201ENST00000324545 MIPOL1Q8TD10 442 aa8.57□□□□□ -1.04
USP9X-201ENST00000324545 SEC62Q99442 399 aaKnown RBP8.57□□□□□ -1.04
USP9X-201ENST00000324545 USO1O60763 962 aaKnown RBP8.57□□□□□ -1.04
USP9X-201ENST00000324545 SSFA2P28290 1259 aa8.57□□□□□ -1.04
USP9X-201ENST00000324545 IQCGQ9H095 443 aaKnown RBP8.57□□□□□ -1.04
USP9X-201ENST00000324545 WASHC2AQ641Q2 1341 aa8.57□□□□□ -1.04
USP9X-201ENST00000324545 NOL3O60936 208 aaKnown RBP8.57□□□□□ -1.04
USP9X-201ENST00000324545 FMNL3Q8IVF7 1028 aa8.57□□□□□ -1.04
USP9X-201ENST00000324545 PRDM11Q9NQV5 511 aa8.57□□□□□ -1.04
USP9X-201ENST00000324545 FGFR1OPO95684 399 aaKnown RBP8.57□□□□□ -1.04
USP9X-201ENST00000324545 HEATR3Q7Z4Q2 680 aa8.57□□□□□ -1.04
USP9X-201ENST00000324545 SLC9A5Q14940 896 aa8.57□□□□□ -1.04
USP9X-201ENST00000324545 RSPH3Q86UC2 560 aa8.57□□□□□ -1.04
USP9X-201ENST00000324545 ABCF3Q9NUQ8 709 aa8.57□□□□□ -1.04
USP9X-201ENST00000324545 CEP164Q9UPV0 1460 aa8.57□□□□□ -1.04
USP9X-201ENST00000324545 ATP5J2-PTCD1G3V325 749 aa8.57□□□□□ -1.04
USP9X-201ENST00000324545 TXNDC9O14530 226 aa8.57□□□□□ -1.04
USP9X-201ENST00000324545 MROH2BQ7Z745 1585 aa8.57□□□□□ -1.04
USP9X-201ENST00000324545 KRT5P13647 590 aa8.57□□□□□ -1.04
USP9X-201ENST00000324545 TAB3Q8N5C8 712 aaPredicted RBP8.57□□□□□ -1.04
USP9X-201ENST00000324545 IFIT3O14879 490 aaKnown RBP8.57□□□□□ -1.04
USP9X-201ENST00000324545 SLC4A1P02730 911 aa8.57□□□□□ -1.04
USP9X-201ENST00000324545 TCEANC2Q96MN5 208 aa8.57□□□□□ -1.04
USP9X-201ENST00000324545 SLC12A7Q9Y666 1083 aa8.57□□□□□ -1.04
USP9X-201ENST00000324545 WDR33Q9C0J8 1336 aaKnown RBP8.56□□□□□ -1.04
USP9X-201ENST00000324545 TLDC2A0PJX2 215 aa8.56□□□□□ -1.04
USP9X-201ENST00000324545 ALS2CR12Q96Q35 445 aa8.56□□□□□ -1.04
USP9X-201ENST00000324545 MARCKSP29966 332 aaPredicted RBP8.56□□□□□ -1.04
USP9X-201ENST00000324545 PRKG1Q13976 671 aa8.56□□□□□ -1.04
USP9X-201ENST00000324545 MAP9Q49MG5 647 aa8.56□□□□□ -1.04
USP9X-201ENST00000324545 CFAP157Q5JU67 520 aa8.56□□□□□ -1.04
USP9X-201ENST00000324545 SMARCC1Q92922 1105 aaPredicted RBP8.56□□□□□ -1.04
USP9X-201ENST00000324545 C8orf76Q96K31 380 aa8.56□□□□□ -1.04
USP9X-201ENST00000324545 HSF2BPO75031 334 aa8.56□□□□□ -1.04
USP9X-201ENST00000324545 HPDP32754 393 aaPredicted RBP8.56□□□□□ -1.04
USP9X-201ENST00000324545 CHST3Q7LGC8 479 aa8.56□□□□□ -1.04
USP9X-201ENST00000324545 VPS36Q86VN1 386 aa8.56□□□□□ -1.04
USP9X-201ENST00000324545 SARNPP82979 210 aaKnown RBP8.56□□□□□ -1.04
USP9X-201ENST00000324545 CNNM3Q8NE01 707 aa8.56□□□□□ -1.04
USP9X-201ENST00000324545 MGARPQ8TDB4 240 aa8.56□□□□□ -1.04
USP9X-201ENST00000324545 TTF1Q15361 905 aaPredicted RBP8.56□□□□□ -1.04
USP9X-201ENST00000324545 ZNF513Q8N8E2 541 aaPredicted RBP8.56□□□□□ -1.04
USP9X-201ENST00000324545 PRAM1Q96QH2 718 aa8.56□□□□□ -1.04
USP9X-201ENST00000324545 PHLDB1Q86UU1 1377 aa8.56□□□□□ -1.04
USP9X-201ENST00000324545 RHOXF2BP0C7M4 288 aa8.56□□□□□ -1.04
USP9X-201ENST00000324545 ACTN2P35609 894 aa8.56□□□□□ -1.04
USP9X-201ENST00000324545 RHOXF2Q9BQY4 288 aa8.56□□□□□ -1.04
USP9X-201ENST00000324545 NECAB1Q8N987 351 aa8.56□□□□□ -1.04
USP9X-201ENST00000324545 UTP14AQ9BVJ6 771 aaKnown RBP8.56□□□□□ -1.04
USP9X-201ENST00000324545 CDKL5O76039 1030 aa8.55□□□□□ -1.04
USP9X-201ENST00000324545 PAFAH1B1P43034 410 aa8.55□□□□□ -1.04
USP9X-201ENST00000324545 DDX27Q96GQ7 796 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms