RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 KIF4BQ2VIQ3 1234 aa12.62□□□□□ -0.39
SNRNP200-201ENST00000323853 CACNA2D4Q7Z3S7 1137 aa12.62□□□□□ -0.39
SNRNP200-201ENST00000323853 TAX1BP1Q86VP1 789 aa12.62□□□□□ -0.39
SNRNP200-201ENST00000323853 CRACR2BQ8N4Y2 399 aaPredicted RBP12.62□□□□□ -0.39
SNRNP200-201ENST00000323853 MAST1Q9Y2H9 1570 aa12.62□□□□□ -0.39
SNRNP200-201ENST00000323853 CCDC194A0A1B0GVG4 234 aa12.61□□□□□ -0.39
SNRNP200-201ENST00000323853 RIMS2Q9UQ26 1411 aa12.61□□□□□ -0.39
SNRNP200-201ENST00000323853 CCDC150Q8NCX0 1101 aa12.61□□□□□ -0.39
SNRNP200-201ENST00000323853 CRACR2AQ9BSW2 395 aa12.61□□□□□ -0.39
SNRNP200-201ENST00000323853 RAB34Q9BZG1 259 aa12.61□□□□□ -0.39
SNRNP200-201ENST00000323853 ZMYM4Q5VZL5 1548 aa12.61□□□□□ -0.39
SNRNP200-201ENST00000323853 GPTP24298 496 aa12.61□□□□□ -0.39
SNRNP200-201ENST00000323853 BIN1O00499 593 aa12.61□□□□□ -0.39
SNRNP200-201ENST00000323853 GBP2P32456 591 aaPredicted RBP12.61□□□□□ -0.39
SNRNP200-201ENST00000323853 USP48Q86UV5 1035 aa12.61□□□□□ -0.39
SNRNP200-201ENST00000323853 TMOD2Q9NZR1 351 aa12.61□□□□□ -0.39
SNRNP200-201ENST00000323853 CPLX3Q8WVH0 158 aa12.61□□□□□ -0.39
SNRNP200-201ENST00000323853 HAND2P61296 217 aa12.6□□□□□ -0.39
SNRNP200-201ENST00000323853 TAF3Q5VWG9 929 aa12.6□□□□□ -0.39
SNRNP200-201ENST00000323853 MFSD6Q6ZSS7 791 aa12.6□□□□□ -0.39
SNRNP200-201ENST00000323853 UBE3BQ7Z3V4 1068 aa12.6□□□□□ -0.39
SNRNP200-201ENST00000323853 ORC3Q9UBD5 711 aaPredicted RBP12.6□□□□□ -0.39
SNRNP200-201ENST00000323853 COL17A1Q9UMD9 1497 aaPredicted RBP12.6□□□□□ -0.39
SNRNP200-201ENST00000323853 KANK3Q6NY19 840 aa12.6□□□□□ -0.39
SNRNP200-201ENST00000323853 PYM1Q9BRP8 204 aaKnown RBP12.6□□□□□ -0.39
SNRNP200-201ENST00000323853 POTEB2H3BUK9 544 aa12.6□□□□□ -0.39
SNRNP200-201ENST00000323853 CEBPAP49715 358 aaPredicted RBP12.6□□□□□ -0.39
SNRNP200-201ENST00000323853 SLF2Q8IX21 1173 aa12.6□□□□□ -0.39
SNRNP200-201ENST00000323853 PHF23Q9BUL5 403 aaPredicted RBP12.6□□□□□ -0.39
SNRNP200-201ENST00000323853 NECAB1Q8N987 351 aa12.6□□□□□ -0.39
SNRNP200-201ENST00000323853 ANKRD62A6NC57 917 aa12.6□□□□□ -0.39
SNRNP200-201ENST00000323853 HMGB2P26583 209 aaKnown RBP12.6□□□□□ -0.39
SNRNP200-201ENST00000323853 CCDC96Q2M329 555 aa12.6□□□□□ -0.39
SNRNP200-201ENST00000323853 SLC26A6Q9BXS9 759 aa12.6□□□□□ -0.39
SNRNP200-201ENST00000323853 WDR7Q9Y4E6 1490 aa12.6□□□□□ -0.39
SNRNP200-201ENST00000323853 SNW1Q13573 536 aaKnown RBP12.6□□□□□ -0.39
SNRNP200-201ENST00000323853 CEP135Q66GS9 1140 aa12.6□□□□□ -0.39
SNRNP200-201ENST00000323853 GIMAP6Q6P9H5 292 aa12.6□□□□□ -0.39
SNRNP200-201ENST00000323853 PPP1R1BQ9UD71 204 aaPredicted RBP12.6□□□□□ -0.39
SNRNP200-201ENST00000323853 USO1O60763 962 aaKnown RBP12.59□□□□□ -0.39
SNRNP200-201ENST00000323853 CAVIN2O95810 425 aa12.59□□□□□ -0.39
SNRNP200-201ENST00000323853 SF3B2Q13435 895 aaKnown RBP12.59□□□□□ -0.39
SNRNP200-201ENST00000323853 EIF4A2Q14240 407 aaKnown RBP12.59□□□□□ -0.39
SNRNP200-201ENST00000323853 ASXL2Q76L83 1435 aa12.59□□□□□ -0.39
SNRNP200-201ENST00000323853 POTEJP0CG39 1038 aa12.59□□□□□ -0.39
SNRNP200-201ENST00000323853 JARID2Q92833 1246 aaPredicted RBP12.59□□□□□ -0.39
SNRNP200-201ENST00000323853 CUL5Q93034 780 aa12.59□□□□□ -0.39
SNRNP200-201ENST00000323853 SNRKQ9NRH2 765 aa12.59□□□□□ -0.39
SNRNP200-201ENST00000323853 TNNQ9UQP3 1299 aa12.59□□□□□ -0.39
SNRNP200-201ENST00000323853 UQCRFS1P1P0C7P4 283 aa12.59□□□□□ -0.39
SNRNP200-201ENST00000323853 CCDC178Q5BJE1 867 aa12.59□□□□□ -0.39
SNRNP200-201ENST00000323853 C16orf71Q8IYS4 520 aaPredicted RBP12.59□□□□□ -0.39
SNRNP200-201ENST00000323853 RAB11FIP4Q86YS3 637 aa12.59□□□□□ -0.39
SNRNP200-201ENST00000323853 RPGRQ92834 1020 aaKnown RBP12.59□□□□□ -0.39
SNRNP200-201ENST00000323853 RBM8AQ9Y5S9 174 aaKnown RBP12.59□□□□□ -0.39
SNRNP200-201ENST00000323853 ALDH1L1O75891 902 aa12.59□□□□□ -0.39
SNRNP200-201ENST00000323853 ZNF165P49910 485 aa12.59□□□□□ -0.39
SNRNP200-201ENST00000323853 LDHAL6AQ6ZMR3 332 aa12.59□□□□□ -0.39
SNRNP200-201ENST00000323853 DESP17661 470 aa12.58□□□□□ -0.39
SNRNP200-201ENST00000323853 ANKRD13DQ6ZTN6 518 aa12.58□□□□□ -0.39
SNRNP200-201ENST00000323853 CCDC12Q8WUD4 166 aaPredicted RBP12.58□□□□□ -0.39
SNRNP200-201ENST00000323853 SHTN1A0MZ66 631 aa12.58□□□□□ -0.4
SNRNP200-201ENST00000323853 GOLGA6L9A6NEM1 432 aa12.58□□□□□ -0.4
SNRNP200-201ENST00000323853 KIF5BP33176 963 aa12.58□□□□□ -0.4
SNRNP200-201ENST00000323853 AKAP4Q5JQC9 854 aa12.58□□□□□ -0.4
SNRNP200-201ENST00000323853 FAM114A1Q8IWE2 563 aa12.58□□□□□ -0.4
SNRNP200-201ENST00000323853 KAT14Q9H8E8 782 aa12.58□□□□□ -0.4
SNRNP200-201ENST00000323853 PRDM10Q9NQV6 1147 aa12.58□□□□□ -0.4
SNRNP200-201ENST00000323853 F13A1P00488 732 aa12.58□□□□□ -0.4
SNRNP200-201ENST00000323853 PRKCSHP14314 528 aaPredicted RBP12.58□□□□□ -0.4
SNRNP200-201ENST00000323853 SSR1P43307 286 aaKnown RBP12.58□□□□□ -0.4
SNRNP200-201ENST00000323853 AMPD3Q01432 767 aa12.58□□□□□ -0.4
SNRNP200-201ENST00000323853 CALML4Q96GE6 196 aa12.58□□□□□ -0.4
SNRNP200-201ENST00000323853 KIF20AO95235 890 aa12.58□□□□□ -0.4
SNRNP200-201ENST00000323853 ANXA1P04083 346 aa12.58□□□□□ -0.4
SNRNP200-201ENST00000323853 VPS36Q86VN1 386 aa12.58□□□□□ -0.4
SNRNP200-201ENST00000323853 MICU3Q86XE3 530 aa12.58□□□□□ -0.4
SNRNP200-201ENST00000323853 UBA5Q9GZZ9 404 aa12.58□□□□□ -0.4
SNRNP200-201ENST00000323853 PAXBP1Q9Y5B6 917 aa12.58□□□□□ -0.4
SNRNP200-201ENST00000323853 TRAPPC8Q9Y2L5 1435 aa12.58□□□□□ -0.4
SNRNP200-201ENST00000323853 ANO6Q4KMQ2 910 aa12.58□□□□□ -0.4
SNRNP200-201ENST00000323853 Q6ZUG5 572 aa12.58□□□□□ -0.4
SNRNP200-201ENST00000323853 CCDC171Q6TFL3 1326 aa12.57□□□□□ -0.4
SNRNP200-201ENST00000323853 MCMDC2Q4G0Z9 681 aa12.57□□□□□ -0.4
SNRNP200-201ENST00000323853 CEP85Q6P2H3 762 aa12.57□□□□□ -0.4
SNRNP200-201ENST00000323853 DDX46Q7L014 1031 aaKnown RBP12.57□□□□□ -0.4
SNRNP200-201ENST00000323853 PUS7Q96PZ0 661 aaKnown RBP12.57□□□□□ -0.4
SNRNP200-201ENST00000323853 CDC5LQ99459 802 aaKnown RBP12.57□□□□□ -0.4
SNRNP200-201ENST00000323853 EHMT1Q9H9B1 1298 aa12.57□□□□□ -0.4
SNRNP200-201ENST00000323853 UHRF1BP1LA0JNW5 1464 aa12.57□□□□□ -0.4
SNRNP200-201ENST00000323853 PZPP20742 1482 aa12.57□□□□□ -0.4
SNRNP200-201ENST00000323853 PDE4BQ07343 736 aa12.57□□□□□ -0.4
SNRNP200-201ENST00000323853 NMIQ13287 307 aaPredicted RBP12.57□□□□□ -0.4
SNRNP200-201ENST00000323853 CCDC102BQ68D86 513 aa12.57□□□□□ -0.4
SNRNP200-201ENST00000323853 BRF1Q92994 677 aa12.57□□□□□ -0.4
SNRNP200-201ENST00000323853 KLF18A0A0U1RQI7 1052 aa12.57□□□□□ -0.4
SNRNP200-201ENST00000323853 HCLS1P14317 486 aaPredicted RBP12.57□□□□□ -0.4
SNRNP200-201ENST00000323853 MTIF2P46199 727 aaKnown RBP12.57□□□□□ -0.4
SNRNP200-201ENST00000323853 ISM2Q6H9L7 571 aa12.57□□□□□ -0.4
SNRNP200-201ENST00000323853 PRIMPOLQ96LW4 560 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms