RNA–Protein interactions for RNA: ENST00000323833.12

TSFM-201, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSFM, Length 1,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-201ENST00000323833 PPP1R42Q7Z4L9 355 aa19.84■□□□□ 0.77
TSFM-201ENST00000323833 NLRP10Q86W26 655 aa19.84■□□□□ 0.77
TSFM-201ENST00000323833 TRMT2AQ8IZ69 625 aaKnown RBP19.84■□□□□ 0.77
TSFM-201ENST00000323833 DDX60Q8IY21 1712 aaKnown RBP19.84■□□□□ 0.77
TSFM-201ENST00000323833 GRIN3BO60391 1043 aa19.83■□□□□ 0.77
TSFM-201ENST00000323833 DDX58O95786 925 aaKnown RBP19.83■□□□□ 0.77
TSFM-201ENST00000323833 ISCA1Q9BUE6 129 aa19.83■□□□□ 0.77
TSFM-201ENST00000323833 UTP14AQ9BVJ6 771 aaKnown RBP19.83■□□□□ 0.77
TSFM-201ENST00000323833 UTRNP46939 3433 aa19.82■□□□□ 0.76
TSFM-201ENST00000323833 DALRD3Q5D0E6 543 aaKnown RBP19.82■□□□□ 0.76
TSFM-201ENST00000323833 ZNF622Q969S3 477 aaKnown RBP eCLIP19.82■□□□□ 0.76
TSFM-201ENST00000323833 MYD88Q99836 296 aa19.82■□□□□ 0.76
TSFM-201ENST00000323833 MAP3K2Q9Y2U5 619 aa19.82■□□□□ 0.76
TSFM-201ENST00000323833 ADCY9O60503 1353 aa19.82■□□□□ 0.76
TSFM-201ENST00000323833 CCDC88AQ3V6T2 1871 aa19.82■□□□□ 0.76
TSFM-201ENST00000323833 PI4KAP2A4QPH2 592 aa19.81■□□□□ 0.76
TSFM-201ENST00000323833 FLIIQ13045 1269 aa19.81■□□□□ 0.76
TSFM-201ENST00000323833 KSR2Q6VAB6 950 aa19.81■□□□□ 0.76
TSFM-201ENST00000323833 PI4KAP1Q8N8J0 262 aa19.81■□□□□ 0.76
TSFM-201ENST00000323833 PDZRN3Q9UPQ7 1066 aa19.81■□□□□ 0.76
TSFM-201ENST00000323833 TAF1P21675 1872 aa19.8■□□□□ 0.76
TSFM-201ENST00000323833 SRGNP10124 158 aa19.8■□□□□ 0.76
TSFM-201ENST00000323833 SYNE4Q8N205 404 aa19.8■□□□□ 0.76
TSFM-201ENST00000323833 METTL22Q9BUU2 404 aaPredicted RBP19.8■□□□□ 0.76
TSFM-201ENST00000323833 TRMT112Q9UI30 125 aaKnown RBP19.8■□□□□ 0.76
TSFM-201ENST00000323833 SBF1O95248 1867 aa19.79■□□□□ 0.76
TSFM-201ENST00000323833 KLRG2A4D1S0 409 aaPredicted RBP19.79■□□□□ 0.76
TSFM-201ENST00000323833 TTLL6Q8N841 843 aa19.79■□□□□ 0.76
TSFM-201ENST00000323833 RIC1Q4ADV7 1423 aa19.78■□□□□ 0.76
TSFM-201ENST00000323833 FKBP5Q13451 457 aaPredicted RBP19.78■□□□□ 0.76
TSFM-201ENST00000323833 MASTLQ96GX5 879 aa19.78■□□□□ 0.76
TSFM-201ENST00000323833 TRIM28Q13263 835 aaKnown RBP19.77■□□□□ 0.76
TSFM-201ENST00000323833 STYK1Q6J9G0 422 aa19.77■□□□□ 0.76
TSFM-201ENST00000323833 C3orf67Q6ZVT6 689 aa19.77■□□□□ 0.76
TSFM-201ENST00000323833 FER1L6Q2WGJ9 1857 aa19.77■□□□□ 0.76
TSFM-201ENST00000323833 RNF123Q5XPI4 1314 aa19.76■□□□□ 0.75
TSFM-201ENST00000323833 SH3TC1Q8TE82 1336 aa19.76■□□□□ 0.75
TSFM-201ENST00000323833 MYH3P11055 1940 aa19.76■□□□□ 0.75
TSFM-201ENST00000323833 NPR1P16066 1061 aa19.76■□□□□ 0.75
TSFM-201ENST00000323833 RTL5Q5HYW3 569 aaPredicted RBP19.76■□□□□ 0.75
TSFM-201ENST00000323833 SLC10A5Q5PT55 438 aa19.76■□□□□ 0.75
TSFM-201ENST00000323833 FAM89AQ96GI7 184 aa19.76■□□□□ 0.75
TSFM-201ENST00000323833 IGKV5-2P06315 115 aa19.75■□□□□ 0.75
TSFM-201ENST00000323833 HCLS1P14317 486 aaPredicted RBP19.75■□□□□ 0.75
TSFM-201ENST00000323833 ARHGAP27Q6ZUM4 889 aa19.75■□□□□ 0.75
TSFM-201ENST00000323833 SSH1Q8WYL5 1049 aa19.75■□□□□ 0.75
TSFM-201ENST00000323833 CNKSR1Q969H4 720 aa19.75■□□□□ 0.75
TSFM-201ENST00000323833 ZNF219Q9P2Y4 722 aaPredicted RBP19.75■□□□□ 0.75
TSFM-201ENST00000323833 CRY2Q49AN0 593 aa19.74■□□□□ 0.75
TSFM-201ENST00000323833 MRPL50Q8N5N7 158 aaKnown RBP19.74■□□□□ 0.75
TSFM-201ENST00000323833 CCDC191Q8NCU4 936 aa19.74■□□□□ 0.75
TSFM-201ENST00000323833 DNAAF4Q8WXU2 420 aa19.74■□□□□ 0.75
TSFM-201ENST00000323833 NLRP3Q96P20 1036 aa19.74■□□□□ 0.75
TSFM-201ENST00000323833 BCL2L13Q9BXK5 485 aa19.74■□□□□ 0.75
TSFM-201ENST00000323833 F6X3S4 739 aa19.73■□□□□ 0.75
TSFM-201ENST00000323833 KCNA4P22459 653 aa19.73■□□□□ 0.75
TSFM-201ENST00000323833 YY1P25490 414 aa19.73■□□□□ 0.75
TSFM-201ENST00000323833 NEXNQ0ZGT2 675 aa19.73■□□□□ 0.75
TSFM-201ENST00000323833 CWF19L2Q2TBE0 894 aaKnown RBP19.73■□□□□ 0.75
TSFM-201ENST00000323833 PRPF40BQ6NWY9 871 aaKnown RBP19.73■□□□□ 0.75
TSFM-201ENST00000323833 JARID2Q92833 1246 aaPredicted RBP19.73■□□□□ 0.75
TSFM-201ENST00000323833 RPGRQ92834 1020 aaKnown RBP19.73■□□□□ 0.75
TSFM-201ENST00000323833 CWC25Q9NXE8 425 aaPredicted RBP19.73■□□□□ 0.75
TSFM-201ENST00000323833 ZBED9Q6R2W3 1325 aa19.73■□□□□ 0.75
TSFM-201ENST00000323833 C21orf2O43822 256 aa19.72■□□□□ 0.75
TSFM-201ENST00000323833 NEURL1BA8MQ27 555 aa19.71■□□□□ 0.75
TSFM-201ENST00000323833 ZBTB38Q8NAP3 1195 aaPredicted RBP19.71■□□□□ 0.75
TSFM-201ENST00000323833 IRS4O14654 1257 aaPredicted RBP19.7■□□□□ 0.74
TSFM-201ENST00000323833 PCCAP05165 728 aaPredicted RBP19.7■□□□□ 0.74
TSFM-201ENST00000323833 CT47B1P0C2W7 299 aaPredicted RBP19.7■□□□□ 0.74
TSFM-201ENST00000323833 ALDH1B1P30837 517 aa19.7■□□□□ 0.74
TSFM-201ENST00000323833 HOXA10P31260 410 aaPredicted RBP19.7■□□□□ 0.74
TSFM-201ENST00000323833 ALDH1L2Q3SY69 923 aa19.7■□□□□ 0.74
TSFM-201ENST00000323833 DICER1Q9UPY3 1922 aaKnown RBP19.69■□□□□ 0.74
TSFM-201ENST00000323833 RBM17Q96I25 401 aaKnown RBP19.69■□□□□ 0.74
TSFM-201ENST00000323833 SMC4Q9NTJ3 1288 aa19.69■□□□□ 0.74
TSFM-201ENST00000323833 RASSF7Q02833 373 aa19.68■□□□□ 0.74
TSFM-201ENST00000323833 OLFM4Q6UX06 510 aa19.68■□□□□ 0.74
TSFM-201ENST00000323833 LINS1Q8NG48 757 aa19.68■□□□□ 0.74
TSFM-201ENST00000323833 SPEF2Q9C093 1822 aa19.67■□□□□ 0.74
TSFM-201ENST00000323833 GCKRQ14397 625 aa19.67■□□□□ 0.74
TSFM-201ENST00000323833 BEND3Q5T5X7 828 aa19.67■□□□□ 0.74
TSFM-201ENST00000323833 C7orf43Q8WVR3 580 aa19.67■□□□□ 0.74
TSFM-201ENST00000323833 CRAMP1Q96RY5 1269 aa19.67■□□□□ 0.74
TSFM-201ENST00000323833 COL4A1P02462 1669 aa19.66■□□□□ 0.74
TSFM-201ENST00000323833 SLC4A10Q6U841 1118 aa19.66■□□□□ 0.74
TSFM-201ENST00000323833 ABCC4O15439 1325 aa19.66■□□□□ 0.74
TSFM-201ENST00000323833 H7C1W4 665 aa19.65■□□□□ 0.74
TSFM-201ENST00000323833 NFKBIEO00221 500 aa19.65■□□□□ 0.74
TSFM-201ENST00000323833 RARSP54136 660 aaKnown RBP19.65■□□□□ 0.74
TSFM-201ENST00000323833 SF3B3Q15393 1217 aaKnown RBP19.65■□□□□ 0.74
TSFM-201ENST00000323833 UBE3BQ7Z3V4 1068 aa19.65■□□□□ 0.74
TSFM-201ENST00000323833 SLC51AQ86UW1 340 aa19.65■□□□□ 0.74
TSFM-201ENST00000323833 PTPRCP08575 1304 aa19.65■□□□□ 0.74
TSFM-201ENST00000323833 CDHR2Q9BYE9 1310 aa19.65■□□□□ 0.74
TSFM-201ENST00000323833 TIAM2Q8IVF5 1701 aa19.65■□□□□ 0.74
TSFM-201ENST00000323833 PRELPP51888 382 aa19.64■□□□□ 0.73
TSFM-201ENST00000323833 DDX46Q7L014 1031 aaKnown RBP19.64■□□□□ 0.73
TSFM-201ENST00000323833 PPEF1O14829 653 aaPredicted RBP19.63■□□□□ 0.73
TSFM-201ENST00000323833 PDE8AO60658 829 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms