RNA–Protein interactions for RNA: ENST00000322147.8

LTBP3-202, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBP3, Length 4,046 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-202ENST00000322147 C16orf45Q96MC5 204 aaPredicted RBP21.61■■□□□ 1.05
LTBP3-202ENST00000322147 TMX1Q9H3N1 280 aa21.61■■□□□ 1.05
LTBP3-202ENST00000322147 IBTKQ9P2D0 1353 aaPredicted RBP21.6■■□□□ 1.05
LTBP3-202ENST00000322147 NEK1Q96PY6 1258 aa21.6■■□□□ 1.05
LTBP3-202ENST00000322147 MYO5CQ9NQX4 1742 aa21.6■■□□□ 1.05
LTBP3-202ENST00000322147 SNRPA1P09661 255 aaKnown RBP21.6■■□□□ 1.05
LTBP3-202ENST00000322147 DHX8Q14562 1220 aaKnown RBP21.6■■□□□ 1.05
LTBP3-202ENST00000322147 CCDC129Q6ZRS4 1044 aa21.6■■□□□ 1.05
LTBP3-202ENST00000322147 C8orf76Q96K31 380 aa21.6■■□□□ 1.05
LTBP3-202ENST00000322147 NACAP1Q9BZK3 213 aa21.6■■□□□ 1.05
LTBP3-202ENST00000322147 MAST1Q9Y2H9 1570 aa21.6■■□□□ 1.05
LTBP3-202ENST00000322147 FLT4P35916 1363 aa21.6■■□□□ 1.05
LTBP3-202ENST00000322147 ANKRD20A12PQ8NF67 263 aa21.59■■□□□ 1.05
LTBP3-202ENST00000322147 TSC1Q92574 1164 aa21.59■■□□□ 1.05
LTBP3-202ENST00000322147 TRIM34Q9BYJ4 488 aa21.59■■□□□ 1.05
LTBP3-202ENST00000322147 BICC1Q9H694 974 aaKnown RBP21.59■■□□□ 1.05
LTBP3-202ENST00000322147 TMEM63CQ9P1W3 806 aa21.59■■□□□ 1.05
LTBP3-202ENST00000322147 GPT2Q8TD30 523 aa21.59■■□□□ 1.05
LTBP3-202ENST00000322147 ACSBG1Q96GR2 724 aa21.59■■□□□ 1.05
LTBP3-202ENST00000322147 NAPBQ9H115 298 aa21.59■■□□□ 1.05
LTBP3-202ENST00000322147 XBP1P17861 261 aa21.58■■□□□ 1.05
LTBP3-202ENST00000322147 CTNNA3Q9UI47 895 aa21.58■■□□□ 1.05
LTBP3-202ENST00000322147 USP16Q9Y5T5 823 aa21.58■■□□□ 1.05
LTBP3-202ENST00000322147 ZNF213O14771 459 aa21.58■■□□□ 1.04
LTBP3-202ENST00000322147 RXRAP19793 462 aa21.58■■□□□ 1.04
LTBP3-202ENST00000322147 CFAP100Q494V2 611 aa21.58■■□□□ 1.04
LTBP3-202ENST00000322147 FAM227BQ96M60 508 aa21.58■■□□□ 1.04
LTBP3-202ENST00000322147 CEP57L1Q8IYX8 460 aa21.57■■□□□ 1.04
LTBP3-202ENST00000322147 FSIP1Q8NA03 581 aa21.57■■□□□ 1.04
LTBP3-202ENST00000322147 SH2B1Q9NRF2 756 aaPredicted RBP21.57■■□□□ 1.04
LTBP3-202ENST00000322147 RANBP6O60518 1105 aaKnown RBP21.57■■□□□ 1.04
LTBP3-202ENST00000322147 ATP10AO60312 1499 aa21.57■■□□□ 1.04
LTBP3-202ENST00000322147 ZSCAN22P10073 491 aaPredicted RBP21.57■■□□□ 1.04
LTBP3-202ENST00000322147 SCAND2PQ9GZW5 306 aaPredicted RBP21.57■■□□□ 1.04
LTBP3-202ENST00000322147 ZNF165P49910 485 aa21.56■■□□□ 1.04
LTBP3-202ENST00000322147 HMGN5P82970 282 aaKnown RBP21.56■■□□□ 1.04
LTBP3-202ENST00000322147 IL17REQ8NFR9 667 aa21.56■■□□□ 1.04
LTBP3-202ENST00000322147 CWC25Q9NXE8 425 aaPredicted RBP21.56■■□□□ 1.04
LTBP3-202ENST00000322147 DACT1Q9NYF0 836 aa21.56■■□□□ 1.04
LTBP3-202ENST00000322147 YEATS2Q9ULM3 1422 aa21.56■■□□□ 1.04
LTBP3-202ENST00000322147 CCDC94Q9BW85 323 aaPredicted RBP21.56■■□□□ 1.04
LTBP3-202ENST00000322147 SBNO2Q9Y2G9 1366 aa21.56■■□□□ 1.04
LTBP3-202ENST00000322147 SOS1Q07889 1333 aaPredicted RBP21.56■■□□□ 1.04
LTBP3-202ENST00000322147 TNNT3P45378 269 aaPredicted RBP21.56■■□□□ 1.04
LTBP3-202ENST00000322147 CCDC112Q8NEF3 446 aa21.56■■□□□ 1.04
LTBP3-202ENST00000322147 LINS1Q8NG48 757 aa21.56■■□□□ 1.04
LTBP3-202ENST00000322147 PLEKHF1Q96S99 279 aa21.56■■□□□ 1.04
LTBP3-202ENST00000322147 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.56■■□□□ 1.04
LTBP3-202ENST00000322147 ABCA8O94911 1581 aa21.55■■□□□ 1.04
LTBP3-202ENST00000322147 BRMS1Q9HCU9 246 aa21.55■■□□□ 1.04
LTBP3-202ENST00000322147 ORC3Q9UBD5 711 aaPredicted RBP21.55■■□□□ 1.04
LTBP3-202ENST00000322147 TFCP2Q12800 502 aa21.55■■□□□ 1.04
LTBP3-202ENST00000322147 AKAP4Q5JQC9 854 aa21.55■■□□□ 1.04
LTBP3-202ENST00000322147 ZHX3Q9H4I2 956 aa21.55■■□□□ 1.04
LTBP3-202ENST00000322147 PALD1Q9ULE6 856 aa21.55■■□□□ 1.04
LTBP3-202ENST00000322147 GOLGA6L1Q8N7Z2 621 aa21.55■■□□□ 1.04
LTBP3-202ENST00000322147 TTC21AQ8NDW8 1320 aa21.54■■□□□ 1.04
LTBP3-202ENST00000322147 PUS7Q96PZ0 661 aaKnown RBP21.54■■□□□ 1.04
LTBP3-202ENST00000322147 MADDQ8WXG6 1647 aa21.54■■□□□ 1.04
LTBP3-202ENST00000322147 ZNF594Q96JF6 807 aaPredicted RBP21.54■■□□□ 1.04
LTBP3-202ENST00000322147 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.54■■□□□ 1.048e-11■■■■■ 27
LTBP3-202ENST00000322147 IFIT3O14879 490 aaKnown RBP21.54■■□□□ 1.04
LTBP3-202ENST00000322147 JMYQ8N9B5 988 aa21.54■■□□□ 1.04
LTBP3-202ENST00000322147 PDLIM2Q96JY6 352 aa21.54■■□□□ 1.04
LTBP3-202ENST00000322147 UNC13BO14795 1591 aa21.54■■□□□ 1.04
LTBP3-202ENST00000322147 SYT1P21579 422 aa21.53■■□□□ 1.04
LTBP3-202ENST00000322147 ATP7AQ04656 1500 aa21.53■■□□□ 1.04
LTBP3-202ENST00000322147 IGHMBP2P38935 993 aaKnown RBP21.53■■□□□ 1.04
LTBP3-202ENST00000322147 Q6ZUG5 572 aa21.53■■□□□ 1.04
LTBP3-202ENST00000322147 PRDM4Q9UKN5 801 aa21.53■■□□□ 1.04
LTBP3-202ENST00000322147 SSBP05455 408 aaKnown RBP eCLIP21.53■■□□□ 1.04
LTBP3-202ENST00000322147 JAG2Q9Y219 1238 aa21.53■■□□□ 1.04
LTBP3-202ENST00000322147 CPLX3Q8WVH0 158 aa21.52■■□□□ 1.04
LTBP3-202ENST00000322147 FAM89AQ96GI7 184 aa21.52■■□□□ 1.04
LTBP3-202ENST00000322147 IQGAP3Q86VI3 1631 aa21.52■■□□□ 1.04
LTBP3-202ENST00000322147 TTC37Q6PGP7 1564 aa21.52■■□□□ 1.04
LTBP3-202ENST00000322147 CLEC17AQ6ZS10 378 aa21.52■■□□□ 1.04
LTBP3-202ENST00000322147 A1BGP04217 495 aa21.52■■□□□ 1.04
LTBP3-202ENST00000322147 GNL3LQ9NVN8 582 aaKnown RBP21.52■■□□□ 1.04
LTBP3-202ENST00000322147 USP44Q9H0E7 712 aa21.52■■□□□ 1.03
LTBP3-202ENST00000322147 NSFL1CQ9UNZ2 370 aaKnown RBP21.52■■□□□ 1.03
LTBP3-202ENST00000322147 PPP4R3BQ5MIZ7 849 aa21.51■■□□□ 1.03
LTBP3-202ENST00000322147 MARCKSP29966 332 aaPredicted RBP21.51■■□□□ 1.03
LTBP3-202ENST00000322147 KLF18A0A0U1RQI7 1052 aa21.51■■□□□ 1.03
LTBP3-202ENST00000322147 UBE2HP62256 183 aa21.51■■□□□ 1.03
LTBP3-202ENST00000322147 DBNDD2Q9BQY9 259 aa21.51■■□□□ 1.03
LTBP3-202ENST00000322147 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.51■■□□□ 1.03
LTBP3-202ENST00000322147 APOBRQ0VD83 1088 aa21.5■■□□□ 1.03
LTBP3-202ENST00000322147 UNC5CLQ8IV45 518 aa21.5■■□□□ 1.03
LTBP3-202ENST00000322147 CLIP2Q9UDT6 1046 aa21.5■■□□□ 1.03
LTBP3-202ENST00000322147 C17orf53Q8N3J3 647 aaPredicted RBP21.5■■□□□ 1.03
LTBP3-202ENST00000322147 CREB3L3Q68CJ9 461 aa21.5■■□□□ 1.03
LTBP3-202ENST00000322147 SIRT2Q8IXJ6 389 aa21.5■■□□□ 1.03
LTBP3-202ENST00000322147 PPP1R1BQ9UD71 204 aaPredicted RBP21.5■■□□□ 1.03
LTBP3-202ENST00000322147 AKAP2Q9Y2D5 859 aa21.5■■□□□ 1.03
LTBP3-202ENST00000322147 RNF17Q9BXT8 1623 aaKnown RBP21.49■■□□□ 1.03
LTBP3-202ENST00000322147 SPDYE4A6NLX3 237 aa21.49■■□□□ 1.03
LTBP3-202ENST00000322147 RNMTO43148 476 aaKnown RBP21.49■■□□□ 1.03
LTBP3-202ENST00000322147 ZCRB1Q8TBF4 217 aaKnown RBP21.49■■□□□ 1.03
LTBP3-202ENST00000322147 GADD45BO75293 160 aaPredicted RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms