RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 PXDNLA1KZ92 1463 aa21.16■□□□□ 0.98
PRKCB-202ENST00000321728 NECTIN1Q15223 517 aa21.15■□□□□ 0.98
PRKCB-202ENST00000321728 CCDC144BQ3MJ40 725 aa21.15■□□□□ 0.98
PRKCB-202ENST00000321728 CREB3L3Q68CJ9 461 aa21.15■□□□□ 0.98
PRKCB-202ENST00000321728 C14orf37Q86TY3 774 aa21.15■□□□□ 0.98
PRKCB-202ENST00000321728 CCDC144CPQ8IYA2 1237 aa21.15■□□□□ 0.98
PRKCB-202ENST00000321728 CCDC171Q6TFL3 1326 aa21.15■□□□□ 0.98
PRKCB-202ENST00000321728 CEP170BQ9Y4F5 1589 aaPredicted RBP21.15■□□□□ 0.98
PRKCB-202ENST00000321728 NR1I2O75469 434 aa21.15■□□□□ 0.98
PRKCB-202ENST00000321728 PDIA4P13667 645 aaKnown RBP21.15■□□□□ 0.98
PRKCB-202ENST00000321728 EIF2S2P20042 333 aaKnown RBP21.15■□□□□ 0.98
PRKCB-202ENST00000321728 USP6P35125 1406 aa21.15■□□□□ 0.98
PRKCB-202ENST00000321728 LEO1Q8WVC0 666 aaPredicted RBP21.15■□□□□ 0.98
PRKCB-202ENST00000321728 HTATSF1O43719 755 aaKnown RBP21.14■□□□□ 0.98
PRKCB-202ENST00000321728 ANXA1P04083 346 aa21.14■□□□□ 0.98
PRKCB-202ENST00000321728 TAF3Q5VWG9 929 aa21.14■□□□□ 0.97
PRKCB-202ENST00000321728 LARP1Q6PKG0 1096 aaKnown RBP21.14■□□□□ 0.97
PRKCB-202ENST00000321728 KIF18AQ8NI77 898 aa21.14■□□□□ 0.97
PRKCB-202ENST00000321728 ECHDC1Q9NTX5 307 aa21.14■□□□□ 0.97
PRKCB-202ENST00000321728 KDRP35968 1356 aa21.14■□□□□ 0.97
PRKCB-202ENST00000321728 TAF7Q15545 349 aaPredicted RBP21.13■□□□□ 0.97
PRKCB-202ENST00000321728 KCNB2Q92953 911 aa21.13■□□□□ 0.97
PRKCB-202ENST00000321728 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.13■□□□□ 0.97
PRKCB-202ENST00000321728 PSMA5P28066 241 aa21.13■□□□□ 0.97
PRKCB-202ENST00000321728 COL9A3Q14050 684 aaPredicted RBP21.13■□□□□ 0.97
PRKCB-202ENST00000321728 FLT4P35916 1363 aa21.13■□□□□ 0.97
PRKCB-202ENST00000321728 USP42Q9H9J4 1324 aaKnown RBP21.13■□□□□ 0.97
PRKCB-202ENST00000321728 GOLGA6L19H0YKK7 550 aa21.12■□□□□ 0.97
PRKCB-202ENST00000321728 IFIT2P09913 472 aaKnown RBP21.12■□□□□ 0.97
PRKCB-202ENST00000321728 STK3Q13188 491 aa21.12■□□□□ 0.97
PRKCB-202ENST00000321728 IL17REQ8NFR9 667 aa21.12■□□□□ 0.97
PRKCB-202ENST00000321728 GPATCH3Q96I76 525 aa21.12■□□□□ 0.97
PRKCB-202ENST00000321728 MORC2Q9Y6X9 1032 aaPredicted RBP21.12■□□□□ 0.97
PRKCB-202ENST00000321728 CACNA1FO60840 1977 aa21.12■□□□□ 0.97
PRKCB-202ENST00000321728 USP31Q70CQ4 1352 aa21.12■□□□□ 0.97
PRKCB-202ENST00000321728 RBM43Q6ZSC3 357 aaKnown RBP21.12■□□□□ 0.97
PRKCB-202ENST00000321728 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.12■□□□□ 0.97
PRKCB-202ENST00000321728 V9GYY5 206 aaPredicted RBP21.12■□□□□ 0.97
PRKCB-202ENST00000321728 NLRP6P59044 892 aa21.12■□□□□ 0.97
PRKCB-202ENST00000321728 IGSF1Q8N6C5 1336 aa21.11■□□□□ 0.97
PRKCB-202ENST00000321728 BLOC1S2Q6QNY1 142 aa21.11■□□□□ 0.97
PRKCB-202ENST00000321728 SIRT1Q96EB6 747 aa21.11■□□□□ 0.97
PRKCB-202ENST00000321728 FAM227BQ96M60 508 aa21.11■□□□□ 0.97
PRKCB-202ENST00000321728 ARID5BQ14865 1188 aa21.11■□□□□ 0.97
PRKCB-202ENST00000321728 LRRC8AQ8IWT6 810 aa21.11■□□□□ 0.97
PRKCB-202ENST00000321728 EVI5LQ96CN4 794 aa21.11■□□□□ 0.97
PRKCB-202ENST00000321728 USP27XA6NNY8 438 aa21.1■□□□□ 0.97
PRKCB-202ENST00000321728 SLFN14P0C7P3 912 aa21.1■□□□□ 0.97
PRKCB-202ENST00000321728 PGBD1Q96JS3 809 aa21.1■□□□□ 0.97
PRKCB-202ENST00000321728 ZNF215Q9UL58 517 aaPredicted RBP21.1■□□□□ 0.97
PRKCB-202ENST00000321728 SBNO1A3KN83 1393 aa21.1■□□□□ 0.97
PRKCB-202ENST00000321728 PI4KAP2A4QPH2 592 aa21.1■□□□□ 0.97
PRKCB-202ENST00000321728 SLC27A2O14975 620 aa21.1■□□□□ 0.97
PRKCB-202ENST00000321728 PTPN14Q15678 1187 aa21.1■□□□□ 0.97
PRKCB-202ENST00000321728 PI4KAP1Q8N8J0 262 aa21.1■□□□□ 0.97
PRKCB-202ENST00000321728 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.09■□□□□ 0.97
PRKCB-202ENST00000321728 PLEKHG3A1L390 1219 aa21.09■□□□□ 0.97
PRKCB-202ENST00000321728 ANKRD1Q15327 319 aa21.09■□□□□ 0.97
PRKCB-202ENST00000321728 KRT222Q8N1A0 295 aa21.09■□□□□ 0.97
PRKCB-202ENST00000321728 ZNF397Q8NF99 534 aaPredicted RBP21.09■□□□□ 0.97
PRKCB-202ENST00000321728 DNAAF4Q8WXU2 420 aa21.09■□□□□ 0.97
PRKCB-202ENST00000321728 NMIQ13287 307 aaPredicted RBP21.09■□□□□ 0.97
PRKCB-202ENST00000321728 MAP4K1Q92918 833 aa21.09■□□□□ 0.97
PRKCB-202ENST00000321728 RBM33Q96EV2 1170 aaKnown RBP21.09■□□□□ 0.97
PRKCB-202ENST00000321728 CDC25BP30305 580 aa21.08■□□□□ 0.97
PRKCB-202ENST00000321728 KMT5BQ4FZB7 885 aa21.08■□□□□ 0.97
PRKCB-202ENST00000321728 BEND3Q5T5X7 828 aa21.08■□□□□ 0.97
PRKCB-202ENST00000321728 N4BP2Q86UW6 1770 aaPredicted RBP21.08■□□□□ 0.97
PRKCB-202ENST00000321728 SKILP12757 684 aa21.08■□□□□ 0.96
PRKCB-202ENST00000321728 AACSQ86V21 672 aa21.08■□□□□ 0.96
PRKCB-202ENST00000321728 TNRQ92752 1358 aa21.07■□□□□ 0.96
PRKCB-202ENST00000321728 TMEM2Q9UHN6 1383 aa21.07■□□□□ 0.96
PRKCB-202ENST00000321728 RNF20Q5VTR2 975 aa21.07■□□□□ 0.96
PRKCB-202ENST00000321728 TRMT1Q9NXH9 659 aaKnown RBP21.07■□□□□ 0.96
PRKCB-202ENST00000321728 PA2G4Q9UQ80 394 aaKnown RBP21.07■□□□□ 0.96
PRKCB-202ENST00000321728 CAVIN2O95810 425 aa21.07■□□□□ 0.96
PRKCB-202ENST00000321728 FILIP1Q7Z7B0 1213 aa21.07■□□□□ 0.96
PRKCB-202ENST00000321728 CHPF2Q9P2E5 772 aa21.07■□□□□ 0.96
PRKCB-202ENST00000321728 AMOTL2Q9Y2J4 779 aa21.07■□□□□ 0.96
PRKCB-202ENST00000321728 CRYBG1Q9Y4K1 1723 aa21.06■□□□□ 0.96
PRKCB-202ENST00000321728 ADAMTS13Q76LX8 1427 aa21.06■□□□□ 0.96
PRKCB-202ENST00000321728 TERF2Q15554 542 aa21.06■□□□□ 0.96
PRKCB-202ENST00000321728 NALCNQ8IZF0 1738 aa21.06■□□□□ 0.96
PRKCB-202ENST00000321728 SETD1BQ9UPS6 1966 aaKnown RBP21.06■□□□□ 0.96
PRKCB-202ENST00000321728 TECPR2O15040 1411 aa21.06■□□□□ 0.96
PRKCB-202ENST00000321728 NEMFO60524 1076 aa21.06■□□□□ 0.96
PRKCB-202ENST00000321728 RPS6KB1P23443 525 aa21.06■□□□□ 0.96
PRKCB-202ENST00000321728 HDGFP51858 240 aaKnown RBP21.06■□□□□ 0.96
PRKCB-202ENST00000321728 CEBPZQ03701 1054 aaKnown RBP21.06■□□□□ 0.96
PRKCB-202ENST00000321728 FMN2Q9NZ56 1722 aa21.05■□□□□ 0.96
PRKCB-202ENST00000321728 DDX11Q96FC9 970 aa21.05■□□□□ 0.96
PRKCB-202ENST00000321728 USP16Q9Y5T5 823 aa21.05■□□□□ 0.96
PRKCB-202ENST00000321728 TAF6LQ9Y6J9 622 aa21.05■□□□□ 0.96
PRKCB-202ENST00000321728 BECN2A8MW95 431 aa21.05■□□□□ 0.96
PRKCB-202ENST00000321728 RBM6P78332 1123 aaKnown RBP21.05■□□□□ 0.96
PRKCB-202ENST00000321728 C11orf57Q6ZUT1 292 aaPredicted RBP21.05■□□□□ 0.96
PRKCB-202ENST00000321728 H3BQV1 296 aa21.04■□□□□ 0.96
PRKCB-202ENST00000321728 JAK2O60674 1132 aa21.04■□□□□ 0.96
PRKCB-202ENST00000321728 TOB2Q14106 344 aaPredicted RBP21.04■□□□□ 0.96
PRKCB-202ENST00000321728 IQCB1Q15051 598 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms