RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 ZSWIM4Q9H7M6 989 aa19.25■□□□□ 0.67
CLIP4-201ENST00000320081 PALD1Q9ULE6 856 aa19.25■□□□□ 0.67
CLIP4-201ENST00000320081 POGZQ7Z3K3 1410 aa19.25■□□□□ 0.67
CLIP4-201ENST00000320081 ADGRL2O95490 1459 aa19.25■□□□□ 0.67
CLIP4-201ENST00000320081 SFPQP23246 707 aaKnown RBP eCLIP19.25■□□□□ 0.67
CLIP4-201ENST00000320081 CCDC186Q7Z3E2 898 aa19.25■□□□□ 0.67
CLIP4-201ENST00000320081 BLMP54132 1417 aaPredicted RBP19.25■□□□□ 0.67
CLIP4-201ENST00000320081 FILIP1LQ4L180 1135 aa19.24■□□□□ 0.67
CLIP4-201ENST00000320081 MBD5Q9P267 1494 aa19.24■□□□□ 0.67
CLIP4-201ENST00000320081 SHANK2Q9UPX8 1470 aa19.24■□□□□ 0.67
CLIP4-201ENST00000320081 TNNT1P13805 278 aa19.24■□□□□ 0.67
CLIP4-201ENST00000320081 APOBRQ0VD83 1088 aa19.24■□□□□ 0.67
CLIP4-201ENST00000320081 NBPF6Q5VWK0 638 aa19.24■□□□□ 0.67
CLIP4-201ENST00000320081 LINS1Q8NG48 757 aa19.24■□□□□ 0.67
CLIP4-201ENST00000320081 NBPF4Q96M43 638 aa19.24■□□□□ 0.67
CLIP4-201ENST00000320081 ZNF219Q9P2Y4 722 aaPredicted RBP19.24■□□□□ 0.67
CLIP4-201ENST00000320081 ANO6Q4KMQ2 910 aa19.24■□□□□ 0.67
CLIP4-201ENST00000320081 PPFIBP1Q86W92 1011 aa19.24■□□□□ 0.67
CLIP4-201ENST00000320081 PDCL2Q8N4E4 241 aa19.24■□□□□ 0.67
CLIP4-201ENST00000320081 ZNF594Q96JF6 807 aaPredicted RBP19.24■□□□□ 0.67
CLIP4-201ENST00000320081 GPS2Q13227 327 aa19.23■□□□□ 0.67
CLIP4-201ENST00000320081 ENOX2Q16206 610 aaKnown RBP19.23■□□□□ 0.67
CLIP4-201ENST00000320081 CDK5RAP3Q96JB5 506 aa19.23■□□□□ 0.67
CLIP4-201ENST00000320081 IGSF3O75054 1194 aa19.23■□□□□ 0.67
CLIP4-201ENST00000320081 GADD45BO75293 160 aaPredicted RBP19.23■□□□□ 0.67
CLIP4-201ENST00000320081 RBM25P49756 843 aaKnown RBP19.23■□□□□ 0.67
CLIP4-201ENST00000320081 DNA2P51530 1060 aa19.23■□□□□ 0.67
CLIP4-201ENST00000320081 F13A1P00488 732 aa19.23■□□□□ 0.67
CLIP4-201ENST00000320081 RBM5P52756 815 aaKnown RBP eCLIP19.23■□□□□ 0.67
CLIP4-201ENST00000320081 ZSCAN25Q6NSZ9 544 aa19.23■□□□□ 0.67
CLIP4-201ENST00000320081 GOLGA8AA7E2F4 631 aa19.22■□□□□ 0.67
CLIP4-201ENST00000320081 LTKP29376 864 aa19.22■□□□□ 0.67
CLIP4-201ENST00000320081 PTPN14Q15678 1187 aa19.22■□□□□ 0.67
CLIP4-201ENST00000320081 OTUD7BQ6GQQ9 843 aa19.22■□□□□ 0.67
CLIP4-201ENST00000320081 ZSCAN29Q8IWY8 852 aaPredicted RBP19.22■□□□□ 0.67
CLIP4-201ENST00000320081 ERCC4Q92889 916 aaPredicted RBP19.22■□□□□ 0.67
CLIP4-201ENST00000320081 AKAP2Q9Y2D5 859 aa19.22■□□□□ 0.67
CLIP4-201ENST00000320081 ZMYM3Q14202 1370 aa19.22■□□□□ 0.67
CLIP4-201ENST00000320081 URI1O94763 535 aaPredicted RBP19.22■□□□□ 0.67
CLIP4-201ENST00000320081 CREB3L3Q68CJ9 461 aa19.22■□□□□ 0.67
CLIP4-201ENST00000320081 TANGO6Q9C0B7 1094 aa19.22■□□□□ 0.67
CLIP4-201ENST00000320081 SLC12A7Q9Y666 1083 aa19.22■□□□□ 0.67
CLIP4-201ENST00000320081 TXLNAP40222 546 aa19.22■□□□□ 0.67
CLIP4-201ENST00000320081 EPS15P42566 896 aa19.22■□□□□ 0.67
CLIP4-201ENST00000320081 FAM89AQ96GI7 184 aa19.22■□□□□ 0.67
CLIP4-201ENST00000320081 NCOA5Q9HCD5 579 aaKnown RBP19.22■□□□□ 0.67
CLIP4-201ENST00000320081 SLC26A6Q9BXS9 759 aa19.22■□□□□ 0.67
CLIP4-201ENST00000320081 SAMD9Q5K651 1589 aa19.21■□□□□ 0.67
CLIP4-201ENST00000320081 AKAP4Q5JQC9 854 aa19.21■□□□□ 0.67
CLIP4-201ENST00000320081 TMC6Q7Z403 805 aa19.21■□□□□ 0.67
CLIP4-201ENST00000320081 CCDC43Q96MW1 224 aaKnown RBP19.21■□□□□ 0.67
CLIP4-201ENST00000320081 DBNDD2Q9BQY9 259 aa19.21■□□□□ 0.67
CLIP4-201ENST00000320081 ZNF521Q96K83 1311 aa19.21■□□□□ 0.67
CLIP4-201ENST00000320081 HSP90B2PQ58FF3 399 aa19.21■□□□□ 0.67
CLIP4-201ENST00000320081 LUZP1Q86V48 1076 aa19.21■□□□□ 0.67
CLIP4-201ENST00000320081 ANKRD18BA2A2Z9 1011 aa19.21■□□□□ 0.67
CLIP4-201ENST00000320081 KRT18P05783 430 aaKnown RBP19.21■□□□□ 0.67
CLIP4-201ENST00000320081 TMEM67Q5HYA8 995 aa19.21■□□□□ 0.67
CLIP4-201ENST00000320081 CDKL5O76039 1030 aa19.2■□□□□ 0.66
CLIP4-201ENST00000320081 SLC3A2P08195 630 aaKnown RBP19.2■□□□□ 0.66
CLIP4-201ENST00000320081 DHX37Q8IY37 1157 aaKnown RBP19.2■□□□□ 0.66
CLIP4-201ENST00000320081 TRERF1Q96PN7 1200 aa19.2■□□□□ 0.66
CLIP4-201ENST00000320081 CLCN1P35523 988 aa19.2■□□□□ 0.66
CLIP4-201ENST00000320081 VAT1LQ9HCJ6 419 aa19.2■□□□□ 0.66
CLIP4-201ENST00000320081 SLC9C2Q5TAH2 1124 aa19.2■□□□□ 0.66
CLIP4-201ENST00000320081 CCDC70Q6NSX1 233 aa19.2■□□□□ 0.66
CLIP4-201ENST00000320081 GAS2L3Q86XJ1 694 aa19.2■□□□□ 0.66
CLIP4-201ENST00000320081 IL17REQ8NFR9 667 aa19.2■□□□□ 0.66
CLIP4-201ENST00000320081 ANO10Q9NW15 660 aa19.2■□□□□ 0.66
CLIP4-201ENST00000320081 CTDP1Q9Y5B0 961 aaPredicted RBP19.2■□□□□ 0.66
CLIP4-201ENST00000320081 MAP3K12Q12852 859 aa19.2■□□□□ 0.66
CLIP4-201ENST00000320081 CNNM3Q8NE01 707 aa19.2■□□□□ 0.66
CLIP4-201ENST00000320081 MAP7D2Q96T17 732 aa19.2■□□□□ 0.66
CLIP4-201ENST00000320081 A1BGP04217 495 aa19.19■□□□□ 0.66
CLIP4-201ENST00000320081 TEX35Q5T0J7 233 aa19.19■□□□□ 0.66
CLIP4-201ENST00000320081 TTC21AQ8NDW8 1320 aa19.19■□□□□ 0.66
CLIP4-201ENST00000320081 FAM193AP78312 1265 aa19.19■□□□□ 0.66
CLIP4-201ENST00000320081 UNC5CLQ8IV45 518 aa19.19■□□□□ 0.66
CLIP4-201ENST00000320081 IARSP41252 1262 aaKnown RBP19.18■□□□□ 0.66
CLIP4-201ENST00000320081 WWC3Q9ULE0 1092 aa19.18■□□□□ 0.66
CLIP4-201ENST00000320081 MIGA1Q8NAN2 632 aa19.18■□□□□ 0.66
CLIP4-201ENST00000320081 NPC1L1Q9UHC9 1359 aa19.18■□□□□ 0.66
CLIP4-201ENST00000320081 LMOD1P29536 600 aaPredicted RBP19.18■□□□□ 0.66
CLIP4-201ENST00000320081 TRMT2AQ8IZ69 625 aaKnown RBP19.18■□□□□ 0.66
CLIP4-201ENST00000320081 USP44Q9H0E7 712 aa19.18■□□□□ 0.66
CLIP4-201ENST00000320081 ANKIB1Q9P2G1 1089 aa19.18■□□□□ 0.66
CLIP4-201ENST00000320081 MAGEC2Q9UBF1 373 aaPredicted RBP19.18■□□□□ 0.66
CLIP4-201ENST00000320081 ABCA5Q8WWZ7 1642 aa19.17■□□□□ 0.66
CLIP4-201ENST00000320081 EXOC5O00471 708 aa19.17■□□□□ 0.66
CLIP4-201ENST00000320081 ZKSCAN3Q9BRR0 538 aa19.17■□□□□ 0.66
CLIP4-201ENST00000320081 MKNK2Q9HBH9 465 aa19.17■□□□□ 0.66
CLIP4-201ENST00000320081 ZCRB1Q8TBF4 217 aaKnown RBP19.17■□□□□ 0.66
CLIP4-201ENST00000320081 TSC1Q92574 1164 aa19.17■□□□□ 0.66
CLIP4-201ENST00000320081 PLEKHF1Q96S99 279 aa19.17■□□□□ 0.66
CLIP4-201ENST00000320081 RNF216Q9NWF9 866 aaPredicted RBP19.17■□□□□ 0.66
CLIP4-201ENST00000320081 ZHX1Q9UKY1 873 aaPredicted RBP19.17■□□□□ 0.66
CLIP4-201ENST00000320081 METAP2P50579 478 aaKnown RBP eCLIP19.17■□□□□ 0.66
CLIP4-201ENST00000320081 ATP2B3Q16720 1220 aa19.17■□□□□ 0.66
CLIP4-201ENST00000320081 MAP3K5Q99683 1374 aa19.17■□□□□ 0.66
CLIP4-201ENST00000320081 PLA2R1Q13018 1463 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms