RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 SHANK3Q9BYB0 1731 aa24.91■■□□□ 1.58
TTC39C-202ENST00000317571 COL5A2P05997 1499 aaPredicted RBP24.91■■□□□ 1.58
TTC39C-202ENST00000317571 ADCK5Q3MIX3 580 aa24.91■■□□□ 1.58
TTC39C-202ENST00000317571 KIAA1211Q6ZU35 1233 aa24.91■■□□□ 1.58
TTC39C-202ENST00000317571 RUFY3Q7L099 469 aa24.91■■□□□ 1.58
TTC39C-202ENST00000317571 UBE3BQ7Z3V4 1068 aa24.91■■□□□ 1.58
TTC39C-202ENST00000317571 PRDM11Q9NQV5 511 aa24.91■■□□□ 1.58
TTC39C-202ENST00000317571 STRCQ7RTU9 1775 aa24.9■■□□□ 1.58
TTC39C-202ENST00000317571 CASP7P55210 303 aa24.9■■□□□ 1.58
TTC39C-202ENST00000317571 CAVIN1Q6NZI2 390 aaKnown RBP24.9■■□□□ 1.58
TTC39C-202ENST00000317571 PTPN12Q05209 780 aaKnown RBP24.9■■□□□ 1.58
TTC39C-202ENST00000317571 BOLA2Q9H3K6 86 aa24.9■■□□□ 1.58
TTC39C-202ENST00000317571 ABCA3Q99758 1704 aa24.89■■□□□ 1.58
TTC39C-202ENST00000317571 NMIQ13287 307 aaPredicted RBP24.89■■□□□ 1.58
TTC39C-202ENST00000317571 COL9A3Q14050 684 aaPredicted RBP24.89■■□□□ 1.58
TTC39C-202ENST00000317571 RPAP1Q9BWH6 1393 aaPredicted RBP24.89■■□□□ 1.57
TTC39C-202ENST00000317571 SOS2Q07890 1332 aaPredicted RBP24.89■■□□□ 1.57
TTC39C-202ENST00000317571 RABL6Q3YEC7 729 aaPredicted RBP24.88■■□□□ 1.57
TTC39C-202ENST00000317571 PRPF40BQ6NWY9 871 aaKnown RBP24.88■■□□□ 1.57
TTC39C-202ENST00000317571 COPRSQ9NQ92 184 aa24.88■■□□□ 1.57
TTC39C-202ENST00000317571 RBM27Q9P2N5 1060 aaKnown RBP24.88■■□□□ 1.57
TTC39C-202ENST00000317571 KCPQ6ZWJ8 1503 aa24.88■■□□□ 1.57
TTC39C-202ENST00000317571 LARGE1O95461 756 aa24.88■■□□□ 1.57
TTC39C-202ENST00000317571 TOM1L2Q6ZVM7 507 aa24.88■■□□□ 1.57
TTC39C-202ENST00000317571 KCNB2Q92953 911 aa24.88■■□□□ 1.57
TTC39C-202ENST00000317571 RUFY2Q8WXA3 655 aa24.87■■□□□ 1.57
TTC39C-202ENST00000317571 CCDC171Q6TFL3 1326 aa24.87■■□□□ 1.57
TTC39C-202ENST00000317571 A0A0D9SFI3 127 aa24.87■■□□□ 1.57
TTC39C-202ENST00000317571 NCLP19338 710 aaKnown RBP24.87■■□□□ 1.57
TTC39C-202ENST00000317571 ZCRB1Q8TBF4 217 aaKnown RBP24.87■■□□□ 1.57
TTC39C-202ENST00000317571 EDC3Q96F86 508 aaKnown RBP24.87■■□□□ 1.57
TTC39C-202ENST00000317571 NUP188Q5SRE5 1749 aa24.87■■□□□ 1.57
TTC39C-202ENST00000317571 PAPPAQ13219 1627 aa24.87■■□□□ 1.57
TTC39C-202ENST00000317571 CASTP20810 708 aaKnown RBP24.86■■□□□ 1.57
TTC39C-202ENST00000317571 NECTIN1Q15223 517 aa24.86■■□□□ 1.57
TTC39C-202ENST00000317571 ZSCAN23Q3MJ62 389 aa24.86■■□□□ 1.57
TTC39C-202ENST00000317571 PCDH11XQ9BZA7 1347 aa24.86■■□□□ 1.57
TTC39C-202ENST00000317571 PCDH11YQ9BZA8 1340 aa24.86■■□□□ 1.57
TTC39C-202ENST00000317571 COL15A1P39059 1388 aa24.86■■□□□ 1.57
TTC39C-202ENST00000317571 TTLL7Q6ZT98 887 aa24.86■■□□□ 1.57
TTC39C-202ENST00000317571 PLBD2Q8NHP8 589 aa24.86■■□□□ 1.57
TTC39C-202ENST00000317571 DBNLQ9UJU6 430 aaKnown RBP24.86■■□□□ 1.57
TTC39C-202ENST00000317571 A0A087WZG4 1122 aa24.85■■□□□ 1.57
TTC39C-202ENST00000317571 DDX54Q8TDD1 881 aaKnown RBP24.85■■□□□ 1.57
TTC39C-202ENST00000317571 TJP1Q07157 1748 aa24.85■■□□□ 1.57
TTC39C-202ENST00000317571 ZNF445P59923 1031 aa24.85■■□□□ 1.57
TTC39C-202ENST00000317571 DTNBO60941 627 aa24.84■■□□□ 1.57
TTC39C-202ENST00000317571 TFCP2Q12800 502 aa24.84■■□□□ 1.57
TTC39C-202ENST00000317571 SNRKQ9NRH2 765 aa24.84■■□□□ 1.57
TTC39C-202ENST00000317571 ZNF335Q9H4Z2 1342 aaPredicted RBP24.84■■□□□ 1.57
TTC39C-202ENST00000317571 RBM8AQ9Y5S9 174 aaKnown RBP24.84■■□□□ 1.57
TTC39C-202ENST00000317571 JAKMIP1Q96N16 626 aaKnown RBP24.83■■□□□ 1.57
TTC39C-202ENST00000317571 TMEM63CQ9P1W3 806 aa24.83■■□□□ 1.57
TTC39C-202ENST00000317571 SLAIN2Q9P270 581 aa24.83■■□□□ 1.57
TTC39C-202ENST00000317571 NDUFB9Q9Y6M9 179 aa24.83■■□□□ 1.56
TTC39C-202ENST00000317571 MED23Q9ULK4 1368 aa24.83■■□□□ 1.56
TTC39C-202ENST00000317571 A1BGP04217 495 aa24.82■■□□□ 1.56
TTC39C-202ENST00000317571 TNNI3KQ59H18 835 aa24.82■■□□□ 1.56
TTC39C-202ENST00000317571 MAP4K1Q92918 833 aa24.82■■□□□ 1.56
TTC39C-202ENST00000317571 LIMCH1Q9UPQ0 1083 aa24.82■■□□□ 1.56
TTC39C-202ENST00000317571 TAF6LQ9Y6J9 622 aa24.82■■□□□ 1.56
TTC39C-202ENST00000317571 FPGT-TNNI3KV9GXZ4 949 aa24.82■■□□□ 1.56
TTC39C-202ENST00000317571 TOGARAM1Q9Y4F4 1720 aa24.82■■□□□ 1.56
TTC39C-202ENST00000317571 ST3GAL1Q11201 340 aa24.82■■□□□ 1.56
TTC39C-202ENST00000317571 FOXD4L6Q3SYB3 417 aaPredicted RBP24.82■■□□□ 1.56
TTC39C-202ENST00000317571 FOXD4L3Q6VB84 417 aaPredicted RBP24.82■■□□□ 1.56
TTC39C-202ENST00000317571 FSD1Q9BTV5 496 aa24.82■■□□□ 1.56
TTC39C-202ENST00000317571 ZSWIM6Q9HCJ5 1215 aa24.82■■□□□ 1.56
TTC39C-202ENST00000317571 CHGBP05060 677 aa24.81■■□□□ 1.56
TTC39C-202ENST00000317571 NKX1-1Q15270 411 aaPredicted RBP24.81■■□□□ 1.56
TTC39C-202ENST00000317571 ZNF589Q86UQ0 364 aaPredicted RBP24.81■■□□□ 1.56
TTC39C-202ENST00000317571 DNAJC5Q9H3Z4 198 aa24.81■■□□□ 1.56
TTC39C-202ENST00000317571 TCHHQ07283 1943 aa24.81■■□□□ 1.56
TTC39C-202ENST00000317571 FOXO4P98177 505 aa24.81■■□□□ 1.56
TTC39C-202ENST00000317571 CREB3L3Q68CJ9 461 aa24.81■■□□□ 1.56
TTC39C-202ENST00000317571 ERVV-2B6SEH9 535 aa24.8■■□□□ 1.56
TTC39C-202ENST00000317571 LMBR1LQ6UX01 489 aa24.8■■□□□ 1.56
TTC39C-202ENST00000317571 ERBB4Q15303 1308 aa24.79■■□□□ 1.56
TTC39C-202ENST00000317571 H7C1W4 665 aa24.79■■□□□ 1.56
TTC39C-202ENST00000317571 TM6SF1Q9BZW5 370 aa24.79■■□□□ 1.56
TTC39C-202ENST00000317571 GDPD2Q9HCC8 539 aa24.79■■□□□ 1.56
TTC39C-202ENST00000317571 TNS2Q63HR2 1409 aa24.79■■□□□ 1.56
TTC39C-202ENST00000317571 JCADQ9P266 1359 aa24.79■■□□□ 1.56
TTC39C-202ENST00000317571 IL2RBP14784 551 aa24.78■■□□□ 1.56
TTC39C-202ENST00000317571 DBNDD2Q9BQY9 259 aa24.78■■□□□ 1.56
TTC39C-202ENST00000317571 SLC27A2O14975 620 aa24.78■■□□□ 1.56
TTC39C-202ENST00000317571 VPS53Q5VIR6 699 aa24.78■■□□□ 1.56
TTC39C-202ENST00000317571 CARD10Q9BWT7 1032 aa24.78■■□□□ 1.56
TTC39C-202ENST00000317571 STRN4Q9NRL3 753 aa24.78■■□□□ 1.56
TTC39C-202ENST00000317571 PDRG1Q9NUG6 133 aa24.78■■□□□ 1.56
TTC39C-202ENST00000317571 HIP1O00291 1037 aa24.77■■□□□ 1.56
TTC39C-202ENST00000317571 ATP5JP18859 108 aa24.77■■□□□ 1.56
TTC39C-202ENST00000317571 PRIM1P49642 420 aaKnown RBP24.77■■□□□ 1.56
TTC39C-202ENST00000317571 WDR33Q9C0J8 1336 aaKnown RBP24.77■■□□□ 1.56
TTC39C-202ENST00000317571 NASPP49321 788 aaPredicted RBP24.76■■□□□ 1.55
TTC39C-202ENST00000317571 RBSNQ9H1K0 784 aa24.76■■□□□ 1.55
TTC39C-202ENST00000317571 ZBTB3Q9H5J0 574 aa24.76■■□□□ 1.55
TTC39C-202ENST00000317571 GADD45BO75293 160 aaPredicted RBP24.75■■□□□ 1.55
TTC39C-202ENST00000317571 CCDC83Q8IWF9 413 aa24.75■■□□□ 1.55
TTC39C-202ENST00000317571 CYP46A1Q9Y6A2 500 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms