RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 COL4A1P02462 1669 aa8.85□□□□□ -0.99
NPHP1-201ENST00000316534 TCIRG1Q13488 830 aa8.85□□□□□ -0.99
NPHP1-201ENST00000316534 TTLL7Q6ZT98 887 aa8.85□□□□□ -0.99
NPHP1-201ENST00000316534 ZBTB47Q9UFB7 747 aaPredicted RBP8.85□□□□□ -0.99
NPHP1-201ENST00000316534 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.85□□□□□ -0.99
NPHP1-201ENST00000316534 MAST2Q6P0Q8 1798 aa8.84□□□□□ -0.99
NPHP1-201ENST00000316534 NEXNQ0ZGT2 675 aa8.84□□□□□ -0.99
NPHP1-201ENST00000316534 LTBP1Q14766 1721 aa8.84□□□□□ -0.99
NPHP1-201ENST00000316534 RIC3Q7Z5B4 369 aa8.84□□□□□ -0.99
NPHP1-201ENST00000316534 MYD88Q99836 296 aa8.84□□□□□ -0.99
NPHP1-201ENST00000316534 PCCAP05165 728 aaPredicted RBP8.84□□□□□ -0.99
NPHP1-201ENST00000316534 EIF5P55010 431 aaKnown RBP8.84□□□□□ -0.99
NPHP1-201ENST00000316534 ZNF34Q8IZ26 560 aa8.84□□□□□ -0.99
NPHP1-201ENST00000316534 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.84□□□□□ -0.99
NPHP1-201ENST00000316534 TBC1D2Q9BYX2 928 aa8.84□□□□□ -0.99
NPHP1-201ENST00000316534 CHMLP26374 656 aa8.84□□□□□ -1
NPHP1-201ENST00000316534 GIGYF2Q6Y7W6 1299 aaKnown RBP8.84□□□□□ -1
NPHP1-201ENST00000316534 A1BGP04217 495 aa8.83□□□□□ -1
NPHP1-201ENST00000316534 ATG9AQ7Z3C6 839 aa8.83□□□□□ -1
NPHP1-201ENST00000316534 CNTNAP4Q9C0A0 1308 aa8.83□□□□□ -1
NPHP1-201ENST00000316534 ANAPC15P60006 121 aa8.83□□□□□ -1
NPHP1-201ENST00000316534 ESYT1Q9BSJ8 1104 aa8.83□□□□□ -1
NPHP1-201ENST00000316534 CWC25Q9NXE8 425 aaPredicted RBP8.83□□□□□ -1
NPHP1-201ENST00000316534 TNRC6CQ9HCJ0 1690 aaKnown RBP8.83□□□□□ -1
NPHP1-201ENST00000316534 PALLDQ8WX93 1383 aa8.83□□□□□ -1
NPHP1-201ENST00000316534 MYL6BP14649 208 aa8.83□□□□□ -1
NPHP1-201ENST00000316534 CERKQ8TCT0 537 aa8.83□□□□□ -1
NPHP1-201ENST00000316534 UPF2Q9HAU5 1272 aaKnown RBP8.83□□□□□ -1
NPHP1-201ENST00000316534 C9orf78Q9NZ63 289 aaPredicted RBP8.83□□□□□ -1
NPHP1-201ENST00000316534 MED23Q9ULK4 1368 aa8.82□□□□□ -1
NPHP1-201ENST00000316534 DNAJC10Q8IXB1 793 aa8.82□□□□□ -1
NPHP1-201ENST00000316534 DDX54Q8TDD1 881 aaKnown RBP8.82□□□□□ -1
NPHP1-201ENST00000316534 TIAM2Q8IVF5 1701 aa8.82□□□□□ -1
NPHP1-201ENST00000316534 STARD3NLO95772 234 aa8.82□□□□□ -1
NPHP1-201ENST00000316534 SURF6O75683 361 aaKnown RBP8.82□□□□□ -1
NPHP1-201ENST00000316534 DDB1Q16531 1140 aa8.82□□□□□ -1
NPHP1-201ENST00000316534 ZBTB38Q8NAP3 1195 aaPredicted RBP8.82□□□□□ -1
NPHP1-201ENST00000316534 ERC2O15083 957 aa8.81□□□□□ -1
NPHP1-201ENST00000316534 USP35Q9P2H5 1018 aa8.81□□□□□ -1
NPHP1-201ENST00000316534 GLRX3O76003 335 aaKnown RBP8.81□□□□□ -1
NPHP1-201ENST00000316534 HSP90AB3PQ58FF7 597 aa8.81□□□□□ -1
NPHP1-201ENST00000316534 RC3H1Q5TC82 1133 aaKnown RBP8.81□□□□□ -1
NPHP1-201ENST00000316534 CLEC17AQ6ZS10 378 aa8.81□□□□□ -1
NPHP1-201ENST00000316534 ZNF646O15015 1829 aaPredicted RBP8.81□□□□□ -1
NPHP1-201ENST00000316534 RAD50Q92878 1312 aa8.81□□□□□ -1
NPHP1-201ENST00000316534 EAF2Q96CJ1 260 aaPredicted RBP8.81□□□□□ -1
NPHP1-201ENST00000316534 ZNF512BQ96KM6 892 aaPredicted RBP8.81□□□□□ -1
NPHP1-201ENST00000316534 ATP5JP18859 108 aa8.8□□□□□ -1
NPHP1-201ENST00000316534 ECHDC1Q9NTX5 307 aa8.8□□□□□ -1
NPHP1-201ENST00000316534 SGSM2O43147 1006 aa8.8□□□□□ -1
NPHP1-201ENST00000316534 PLEKHG5O94827 1062 aa8.8□□□□□ -1
NPHP1-201ENST00000316534 NLRP10Q86W26 655 aa8.8□□□□□ -1
NPHP1-201ENST00000316534 SMARCC1Q92922 1105 aaPredicted RBP8.8□□□□□ -1
NPHP1-201ENST00000316534 MYO5AQ9Y4I1 1855 aaKnown RBP8.8□□□□□ -1
NPHP1-201ENST00000316534 CAMTA2O94983 1202 aa8.79□□□□□ -1
NPHP1-201ENST00000316534 ITPK1Q13572 414 aa8.79□□□□□ -1
NPHP1-201ENST00000316534 BECN1Q14457 450 aa8.79□□□□□ -1
NPHP1-201ENST00000316534 LSG1Q9H089 658 aaKnown RBP8.79□□□□□ -1
NPHP1-201ENST00000316534 BCL11AQ9H165 835 aa8.79□□□□□ -1
NPHP1-201ENST00000316534 UBN2Q6ZU65 1347 aa8.79□□□□□ -1
NPHP1-201ENST00000316534 MFAP1P55081 439 aaKnown RBP8.79□□□□□ -1
NPHP1-201ENST00000316534 AIMP1Q12904 312 aaKnown RBP8.79□□□□□ -1
NPHP1-201ENST00000316534 RABEP1Q15276 862 aa8.79□□□□□ -1
NPHP1-201ENST00000316534 VGLL2Q8N8G2 317 aa8.79□□□□□ -1
NPHP1-201ENST00000316534 A0A087WZG4 1122 aa8.79□□□□□ -1
NPHP1-201ENST00000316534 REC8O95072 547 aa8.79□□□□□ -1
NPHP1-201ENST00000316534 PRIM1P49642 420 aaKnown RBP8.79□□□□□ -1
NPHP1-201ENST00000316534 IL25Q9H293 177 aa8.79□□□□□ -1
NPHP1-201ENST00000316534 DLEC1Q9Y238 1755 aa8.79□□□□□ -1
NPHP1-201ENST00000316534 MYH15Q9Y2K3 1946 aa8.79□□□□□ -1
NPHP1-201ENST00000316534 HSPA4P34932 840 aa8.78□□□□□ -1
NPHP1-201ENST00000316534 TNNI3KQ59H18 835 aa8.78□□□□□ -1
NPHP1-201ENST00000316534 ALDH8A1Q9H2A2 487 aaPredicted RBP8.78□□□□□ -1
NPHP1-201ENST00000316534 PA2G4Q9UQ80 394 aaKnown RBP8.78□□□□□ -1
NPHP1-201ENST00000316534 FPGT-TNNI3KV9GXZ4 949 aa8.78□□□□□ -1
NPHP1-201ENST00000316534 DUOX1Q9NRD9 1551 aa8.78□□□□□ -1
NPHP1-201ENST00000316534 EVI5LQ96CN4 794 aa8.78□□□□□ -1
NPHP1-201ENST00000316534 ZBTB1Q9Y2K1 713 aa8.78□□□□□ -1
NPHP1-201ENST00000316534 MYH13Q9UKX3 1938 aa8.78□□□□□ -1
NPHP1-201ENST00000316534 RPAP1Q9BWH6 1393 aaPredicted RBP8.78□□□□□ -1
NPHP1-201ENST00000316534 TSGA10IPQ3SY00 556 aa8.78□□□□□ -1
NPHP1-201ENST00000316534 CLASRPQ8N2M8 674 aaKnown RBP8.78□□□□□ -1
NPHP1-201ENST00000316534 CCDC87Q9NVE4 849 aa8.78□□□□□ -1
NPHP1-201ENST00000316534 CIZ1Q9ULV3 898 aaPredicted RBP8.78□□□□□ -1
NPHP1-201ENST00000316534 UBAP1LF5GYI3 381 aa8.77□□□□□ -1
NPHP1-201ENST00000316534 HLFQ16534 295 aa8.77□□□□□ -1
NPHP1-201ENST00000316534 USPL1Q5W0Q7 1092 aa8.77□□□□□ -1
NPHP1-201ENST00000316534 CASC1Q6TDU7 716 aa8.77□□□□□ -1
NPHP1-201ENST00000316534 UBE3BQ7Z3V4 1068 aa8.77□□□□□ -1
NPHP1-201ENST00000316534 LOC102724428A0A0B4J2F2 783 aa8.77□□□□□ -1.01
NPHP1-201ENST00000316534 IL15P40933 162 aaPredicted RBP8.77□□□□□ -1.01
NPHP1-201ENST00000316534 PIP4K2AP48426 406 aaPredicted RBP8.77□□□□□ -1.01
NPHP1-201ENST00000316534 SIK1P57059 783 aa8.77□□□□□ -1.01
NPHP1-201ENST00000316534 CLEC4GQ6UXB4 293 aa8.77□□□□□ -1.01
NPHP1-201ENST00000316534 NPM2Q86SE8 214 aaKnown RBP8.77□□□□□ -1.01
NPHP1-201ENST00000316534 HAUS7Q99871 368 aa8.77□□□□□ -1.01
NPHP1-201ENST00000316534 CD2BP2O95400 341 aaKnown RBP8.77□□□□□ -1.01
NPHP1-201ENST00000316534 KIF6Q6ZMV9 814 aa8.77□□□□□ -1.01
NPHP1-201ENST00000316534 NUTM1Q86Y26 1132 aa8.77□□□□□ -1.01
NPHP1-201ENST00000316534 CNTROBQ8N137 903 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms