RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 COL13A1Q5TAT6 717 aaPredicted RBP22.95■■□□□ 1.26
EXOSC4-201ENST00000316052 IBTKQ9P2D0 1353 aaPredicted RBP22.95■■□□□ 1.26
EXOSC4-201ENST00000316052 FZD9O00144 591 aa22.94■■□□□ 1.26
EXOSC4-201ENST00000316052 RPGRQ92834 1020 aaKnown RBP22.94■■□□□ 1.26
EXOSC4-201ENST00000316052 PSMD1Q99460 953 aa22.94■■□□□ 1.26
EXOSC4-201ENST00000316052 BABAM1Q9NWV8 329 aa22.94■■□□□ 1.26
EXOSC4-201ENST00000316052 RIC1Q4ADV7 1423 aa22.93■■□□□ 1.26
EXOSC4-201ENST00000316052 CCDC146Q8IYE0 955 aa22.93■■□□□ 1.26
EXOSC4-201ENST00000316052 NEUROD2Q15784 382 aa22.92■■□□□ 1.26
EXOSC4-201ENST00000316052 LDHDQ86WU2 507 aa22.92■■□□□ 1.26
EXOSC4-201ENST00000316052 NECTIN2Q92692 538 aa22.92■■□□□ 1.26
EXOSC4-201ENST00000316052 CRAMP1Q96RY5 1269 aa22.92■■□□□ 1.26
EXOSC4-201ENST00000316052 CC2D2BQ6DHV5 1058 aa22.91■■□□□ 1.26
EXOSC4-201ENST00000316052 PPP1R42Q7Z4L9 355 aa22.91■■□□□ 1.26
EXOSC4-201ENST00000316052 RBM17Q96I25 401 aaKnown RBP22.91■■□□□ 1.26
EXOSC4-201ENST00000316052 CREBZFQ9NS37 354 aa22.91■■□□□ 1.26
EXOSC4-201ENST00000316052 COL4A5P29400 1685 aa22.9■■□□□ 1.26
EXOSC4-201ENST00000316052 PASKQ96RG2 1323 aa22.9■■□□□ 1.26
EXOSC4-201ENST00000316052 MYBBP1AQ9BQG0 1328 aaKnown RBP22.9■■□□□ 1.26
EXOSC4-201ENST00000316052 TCERG1O14776 1098 aaKnown RBP22.9■■□□□ 1.26
EXOSC4-201ENST00000316052 LMOD3Q0VAK6 560 aa22.9■■□□□ 1.26
EXOSC4-201ENST00000316052 KRT24Q2M2I5 525 aa22.9■■□□□ 1.26
EXOSC4-201ENST00000316052 PARP10Q53GL7 1025 aa22.9■■□□□ 1.26
EXOSC4-201ENST00000316052 HACL1Q9UJ83 578 aa22.9■■□□□ 1.26
EXOSC4-201ENST00000316052 ITGBL1O95965 494 aaPredicted RBP22.89■■□□□ 1.25
EXOSC4-201ENST00000316052 EAPPQ56P03 285 aaPredicted RBP22.89■■□□□ 1.25
EXOSC4-201ENST00000316052 SLC10A5Q5PT55 438 aa22.89■■□□□ 1.25
EXOSC4-201ENST00000316052 COPS6Q7L5N1 327 aa22.89■■□□□ 1.25
EXOSC4-201ENST00000316052 UTP14AQ9BVJ6 771 aaKnown RBP22.89■■□□□ 1.25
EXOSC4-201ENST00000316052 TRIM35Q9UPQ4 493 aa22.89■■□□□ 1.25
EXOSC4-201ENST00000316052 RNF123Q5XPI4 1314 aa22.88■■□□□ 1.25
EXOSC4-201ENST00000316052 CHL1O00533 1208 aa22.88■■□□□ 1.25
EXOSC4-201ENST00000316052 HSPA1AP0DMV8 641 aaKnown RBP22.88■■□□□ 1.25
EXOSC4-201ENST00000316052 HSPA1BP0DMV9 641 aaKnown RBP22.88■■□□□ 1.25
EXOSC4-201ENST00000316052 EPHX2P34913 555 aa22.88■■□□□ 1.25
EXOSC4-201ENST00000316052 GPC2Q8N158 579 aa22.88■■□□□ 1.25
EXOSC4-201ENST00000316052 XAGE3Q8WTP9 111 aa22.88■■□□□ 1.25
EXOSC4-201ENST00000316052 JDP2Q8WYK2 163 aa22.88■■□□□ 1.25
EXOSC4-201ENST00000316052 NLRP3Q96P20 1036 aa22.88■■□□□ 1.25
EXOSC4-201ENST00000316052 MKRN1Q9UHC7 482 aaKnown RBP22.88■■□□□ 1.25
EXOSC4-201ENST00000316052 PPEF1O14829 653 aaPredicted RBP22.87■■□□□ 1.25
EXOSC4-201ENST00000316052 AIMP1Q12904 312 aaKnown RBP22.87■■□□□ 1.25
EXOSC4-201ENST00000316052 RUNDC1Q96C34 613 aa22.86■■□□□ 1.25
EXOSC4-201ENST00000316052 CLEC11AQ9Y240 323 aa22.86■■□□□ 1.25
EXOSC4-201ENST00000316052 GRIPAP1Q4V328 841 aa22.85■■□□□ 1.25
EXOSC4-201ENST00000316052 NLRP10Q86W26 655 aa22.85■■□□□ 1.25
EXOSC4-201ENST00000316052 DDX21Q9NR30 783 aaKnown RBP eCLIP22.85■■□□□ 1.25
EXOSC4-201ENST00000316052 ADAMTS8Q9UP79 889 aa22.85■■□□□ 1.25
EXOSC4-201ENST00000316052 LAS1LQ9Y4W2 734 aaKnown RBP22.85■■□□□ 1.25
EXOSC4-201ENST00000316052 GJA3Q9Y6H8 435 aa22.85■■□□□ 1.25
EXOSC4-201ENST00000316052 ADAMTSL1Q8N6G6 1762 aa22.85■■□□□ 1.25
EXOSC4-201ENST00000316052 LARGE2Q8N3Y3 721 aa22.84■■□□□ 1.25
EXOSC4-201ENST00000316052 HCLS1P14317 486 aaPredicted RBP22.83■■□□□ 1.25
EXOSC4-201ENST00000316052 EIF6P56537 245 aaKnown RBP22.83■■□□□ 1.25
EXOSC4-201ENST00000316052 TCIRG1Q13488 830 aa22.83■■□□□ 1.25
EXOSC4-201ENST00000316052 PNMA8AQ86V59 439 aaPredicted RBP22.83■■□□□ 1.25
EXOSC4-201ENST00000316052 ATP6V0A2Q9Y487 856 aa22.83■■□□□ 1.25
EXOSC4-201ENST00000316052 ABCC4O15439 1325 aa22.82■■□□□ 1.24
EXOSC4-201ENST00000316052 ANKRD36CQ5JPF3 1778 aa22.82■■□□□ 1.24
EXOSC4-201ENST00000316052 WDR43Q15061 677 aaKnown RBP eCLIP22.82■■□□□ 1.24
EXOSC4-201ENST00000316052 HSP90AB3PQ58FF7 597 aa22.82■■□□□ 1.24
EXOSC4-201ENST00000316052 MAP1SQ66K74 1059 aaPredicted RBP22.82■■□□□ 1.24
EXOSC4-201ENST00000316052 CNTROBQ8N137 903 aa22.82■■□□□ 1.24
EXOSC4-201ENST00000316052 ZNF428Q96B54 188 aa22.82■■□□□ 1.24
EXOSC4-201ENST00000316052 CHPF2Q9P2E5 772 aa22.82■■□□□ 1.24
EXOSC4-201ENST00000316052 LAMB2P55268 1798 aa22.81■■□□□ 1.24
EXOSC4-201ENST00000316052 CNTNAP1P78357 1384 aa22.81■■□□□ 1.24
EXOSC4-201ENST00000316052 TMEM88BA6NKF7 163 aa22.81■■□□□ 1.24
EXOSC4-201ENST00000316052 LTBP1Q14766 1721 aa22.81■■□□□ 1.24
EXOSC4-201ENST00000316052 TAF1P21675 1872 aa22.8■■□□□ 1.24
EXOSC4-201ENST00000316052 EPS15P42566 896 aa22.8■■□□□ 1.24
EXOSC4-201ENST00000316052 SCNN1DP51172 638 aa22.8■■□□□ 1.24
EXOSC4-201ENST00000316052 TRMT112Q9UI30 125 aaKnown RBP22.8■■□□□ 1.24
EXOSC4-201ENST00000316052 PPIP5K2O43314 1243 aa22.79■■□□□ 1.24
EXOSC4-201ENST00000316052 AOC3Q16853 763 aa22.79■■□□□ 1.24
EXOSC4-201ENST00000316052 BBOX1O75936 387 aa22.78■■□□□ 1.24
EXOSC4-201ENST00000316052 NIM1KQ8IY84 436 aa22.78■■□□□ 1.24
EXOSC4-201ENST00000316052 TNS4Q8IZW8 715 aa22.78■■□□□ 1.24
EXOSC4-201ENST00000316052 RTFDC1Q9BY42 306 aaPredicted RBP22.78■■□□□ 1.24
EXOSC4-201ENST00000316052 VEGFBP49765 207 aa22.77■■□□□ 1.24
EXOSC4-201ENST00000316052 HDGFL1Q5TGJ6 251 aa22.77■■□□□ 1.24
EXOSC4-201ENST00000316052 SP8Q8IXZ3 490 aa22.77■■□□□ 1.24
EXOSC4-201ENST00000316052 TMX4Q9H1E5 349 aaPredicted RBP22.77■■□□□ 1.24
EXOSC4-201ENST00000316052 SH3TC1Q8TE82 1336 aa22.77■■□□□ 1.24
EXOSC4-201ENST00000316052 LMOD1P29536 600 aaPredicted RBP22.76■■□□□ 1.23
EXOSC4-201ENST00000316052 ANKRD13DQ6ZTN6 518 aa22.76■■□□□ 1.23
EXOSC4-201ENST00000316052 PLBD2Q8NHP8 589 aa22.76■■□□□ 1.23
EXOSC4-201ENST00000316052 CFAP44Q96MT7 982 aa22.76■■□□□ 1.23
EXOSC4-201ENST00000316052 VPS33BQ9H267 617 aa22.76■■□□□ 1.23
EXOSC4-201ENST00000316052 PRKRIP1Q9H875 184 aaPredicted RBP22.76■■□□□ 1.23
EXOSC4-201ENST00000316052 HOXB7P09629 217 aa22.75■■□□□ 1.23
EXOSC4-201ENST00000316052 DDX46Q7L014 1031 aaKnown RBP22.75■■□□□ 1.23
EXOSC4-201ENST00000316052 FMR1Q06787 632 aaKnown RBP eCLIP22.74■■□□□ 1.23
EXOSC4-201ENST00000316052 CXCL9Q07325 125 aa22.74■■□□□ 1.23
EXOSC4-201ENST00000316052 GRAPQ13588 217 aa22.74■■□□□ 1.23
EXOSC4-201ENST00000316052 DUSP27Q5VZP5 1158 aa22.74■■□□□ 1.23
EXOSC4-201ENST00000316052 DPP8Q6V1X1 898 aaPredicted RBP22.74■■□□□ 1.23
EXOSC4-201ENST00000316052 MPNDQ8N594 471 aa22.74■■□□□ 1.23
EXOSC4-201ENST00000316052 GRAPLQ8TC17 118 aaPredicted RBP22.74■■□□□ 1.23
EXOSC4-201ENST00000316052 ISCA1Q9BUE6 129 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms