RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 CWC27Q6UX04 472 aaKnown RBP8.59□□□□□ -1.03
LYSMD3-201ENST00000315948 CWC25Q9NXE8 425 aaPredicted RBP8.59□□□□□ -1.03
LYSMD3-201ENST00000315948 UBN2Q6ZU65 1347 aa8.59□□□□□ -1.03
LYSMD3-201ENST00000315948 LOC102724428A0A0B4J2F2 783 aa8.59□□□□□ -1.03
LYSMD3-201ENST00000315948 SIK1P57059 783 aa8.59□□□□□ -1.03
LYSMD3-201ENST00000315948 CERKQ8TCT0 537 aa8.59□□□□□ -1.03
LYSMD3-201ENST00000315948 DDRGK1Q96HY6 314 aa8.59□□□□□ -1.03
LYSMD3-201ENST00000315948 ARFGEF2Q9Y6D5 1785 aa8.59□□□□□ -1.03
LYSMD3-201ENST00000315948 CHMLP26374 656 aa8.59□□□□□ -1.03
LYSMD3-201ENST00000315948 CRKLP46109 303 aaKnown RBP8.59□□□□□ -1.03
LYSMD3-201ENST00000315948 INTS5Q6P9B9 1019 aaKnown RBP8.59□□□□□ -1.03
LYSMD3-201ENST00000315948 OSBPL3Q9H4L5 887 aa8.59□□□□□ -1.03
LYSMD3-201ENST00000315948 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.59□□□□□ -1.03
LYSMD3-201ENST00000315948 WTIPA6NIX2 430 aaPredicted RBP8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 FRAT2O75474 233 aaPredicted RBP8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 G3BP1Q13283 466 aaKnown RBP eCLIP8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 ANO2Q9NQ90 1003 aa8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 DBNLQ9UJU6 430 aaKnown RBP8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 DOT1LQ8TEK3 1739 aa8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 H7C1W4 665 aa8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 STARD3NLO95772 234 aa8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 HCLS1P14317 486 aaPredicted RBP8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 DBNDD2Q9BQY9 259 aa8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 N4BP2Q86UW6 1770 aaPredicted RBP8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 IFIT2P09913 472 aaKnown RBP8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 CPA1P15085 419 aa8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 RBM25P49756 843 aaKnown RBP8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 CLASRPQ8N2M8 674 aaKnown RBP8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 FAM227BQ96M60 508 aa8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 NRAPQ86VF7 1730 aa8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 TCIRG1Q13488 830 aa8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 MEX3CQ5U5Q3 659 aaKnown RBP8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 BICDL1Q6ZP65 573 aa8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 STAP2Q9UGK3 403 aa8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 PAPPAQ13219 1627 aa8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 ATG9AQ7Z3C6 839 aa8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 DZIP3Q86Y13 1208 aaKnown RBP8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 LINC00116Q8NCU8 138 aa8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 UPF3BQ9BZI7 483 aaKnown RBP8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 PI16Q6UXB8 463 aa8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 CHAMP1Q96JM3 812 aa8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 TAF6LQ9Y6J9 622 aa8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 AFDNP55196 1824 aaKnown RBP8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 PALLDQ8WX93 1383 aa8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 NEUROD6Q96NK8 337 aa8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 ESYT1Q9BSJ8 1104 aa8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 ISCA1Q9BUE6 129 aa8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 GREM2Q9H772 168 aa8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 RAB11FIP3O75154 756 aa8.56□□□□□ -1.04
LYSMD3-201ENST00000315948 RABL6Q3YEC7 729 aaPredicted RBP8.56□□□□□ -1.04
LYSMD3-201ENST00000315948 HELBQ8NG08 1087 aaPredicted RBP8.56□□□□□ -1.04
LYSMD3-201ENST00000315948 AFF2P51816 1311 aa8.56□□□□□ -1.04
LYSMD3-201ENST00000315948 KIF6Q6ZMV9 814 aa8.56□□□□□ -1.04
LYSMD3-201ENST00000315948 NLRP10Q86W26 655 aa8.56□□□□□ -1.04
LYSMD3-201ENST00000315948 SEC62Q99442 399 aaKnown RBP8.56□□□□□ -1.04
LYSMD3-201ENST00000315948 CHMP4AQ9BY43 222 aa8.56□□□□□ -1.04
LYSMD3-201ENST00000315948 JCADQ9P266 1359 aa8.56□□□□□ -1.04
LYSMD3-201ENST00000315948 MAP3K15Q6ZN16 1313 aa8.56□□□□□ -1.04
LYSMD3-201ENST00000315948 ADORA1P30542 326 aa8.56□□□□□ -1.04
LYSMD3-201ENST00000315948 DNAJC2Q99543 621 aaKnown RBP8.56□□□□□ -1.04
LYSMD3-201ENST00000315948 ANTXR1Q9H6X2 564 aa8.56□□□□□ -1.04
LYSMD3-201ENST00000315948 MYH14Q7Z406 1995 aaKnown RBP8.56□□□□□ -1.04
LYSMD3-201ENST00000315948 PTH1RQ03431 593 aa8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 NFKBIBQ15653 356 aa8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 SNRKQ9NRH2 765 aa8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 SRP68Q9UHB9 627 aaKnown RBP8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 TRMT112Q9UI30 125 aaKnown RBP8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 LAMB4A4D0S4 1761 aa8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 ERC2O15083 957 aa8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 HSP90AB3PQ58FF7 597 aa8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 GIGYF2Q6Y7W6 1299 aaKnown RBP8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 C3orf67Q6ZVT6 689 aa8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 DDX46Q7L014 1031 aaKnown RBP8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 FNBP4Q8N3X1 1017 aaPredicted RBP8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 ECHDC1Q9NTX5 307 aa8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 VPS72Q15906 364 aa8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 TNNI3KQ59H18 835 aa8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 SUSD4Q5VX71 490 aa8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 CCDC129Q6ZRS4 1044 aa8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 BARGINQ6ZT62 677 aa8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 RASEFQ8IZ41 740 aa8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 SEC31BQ9NQW1 1179 aa8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 FPGT-TNNI3KV9GXZ4 949 aa8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 PKP1Q13835 747 aa8.54□□□□□ -1.04
LYSMD3-201ENST00000315948 CCDC191Q8NCU4 936 aa8.54□□□□□ -1.04
LYSMD3-201ENST00000315948 COPRSQ9NQ92 184 aa8.54□□□□□ -1.04
LYSMD3-201ENST00000315948 TJP1Q07157 1748 aa8.54□□□□□ -1.04
LYSMD3-201ENST00000315948 A0A0D9SFI3 127 aa8.54□□□□□ -1.04
LYSMD3-201ENST00000315948 PHF14O94880 888 aa8.54□□□□□ -1.04
LYSMD3-201ENST00000315948 EIF5P55010 431 aaKnown RBP8.54□□□□□ -1.04
LYSMD3-201ENST00000315948 ZNF589Q86UQ0 364 aaPredicted RBP8.54□□□□□ -1.04
LYSMD3-201ENST00000315948 VSIG10Q8N0Z9 540 aa8.54□□□□□ -1.04
LYSMD3-201ENST00000315948 NUP188Q5SRE5 1749 aa8.54□□□□□ -1.04
LYSMD3-201ENST00000315948 A0A0G2JLW4 131 aa8.54□□□□□ -1.04
LYSMD3-201ENST00000315948 CCDC87Q9NVE4 849 aa8.54□□□□□ -1.04
LYSMD3-201ENST00000315948 THRAP3Q9Y2W1 955 aaKnown RBP8.54□□□□□ -1.04
LYSMD3-201ENST00000315948 SCARF1Q14162 830 aa8.54□□□□□ -1.04
LYSMD3-201ENST00000315948 COL4A1P02462 1669 aa8.53□□□□□ -1.04
LYSMD3-201ENST00000315948 ZGPATQ8N5A5 531 aaKnown RBP8.53□□□□□ -1.04
LYSMD3-201ENST00000315948 TCEANC2Q96MN5 208 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms