RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 CWC27Q6UX04 472 aaKnown RBP8.59□□□□□ -1.03
LYSMD3-201ENST00000315948 CWC25Q9NXE8 425 aaPredicted RBP8.59□□□□□ -1.03
LYSMD3-201ENST00000315948 UBN2Q6ZU65 1347 aa8.59□□□□□ -1.03
LYSMD3-201ENST00000315948 LOC102724428A0A0B4J2F2 783 aa8.59□□□□□ -1.03
LYSMD3-201ENST00000315948 SIK1P57059 783 aa8.59□□□□□ -1.03
LYSMD3-201ENST00000315948 CERKQ8TCT0 537 aa8.59□□□□□ -1.03
LYSMD3-201ENST00000315948 DDRGK1Q96HY6 314 aa8.59□□□□□ -1.03
LYSMD3-201ENST00000315948 ARFGEF2Q9Y6D5 1785 aa8.59□□□□□ -1.03
LYSMD3-201ENST00000315948 CHMLP26374 656 aa8.59□□□□□ -1.03
LYSMD3-201ENST00000315948 CRKLP46109 303 aaKnown RBP8.59□□□□□ -1.03
LYSMD3-201ENST00000315948 INTS5Q6P9B9 1019 aaKnown RBP8.59□□□□□ -1.03
LYSMD3-201ENST00000315948 OSBPL3Q9H4L5 887 aa8.59□□□□□ -1.03
LYSMD3-201ENST00000315948 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.59□□□□□ -1.03
LYSMD3-201ENST00000315948 WTIPA6NIX2 430 aaPredicted RBP8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 FRAT2O75474 233 aaPredicted RBP8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 G3BP1Q13283 466 aaKnown RBP eCLIP8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 ANO2Q9NQ90 1003 aa8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 DBNLQ9UJU6 430 aaKnown RBP8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 DOT1LQ8TEK3 1739 aa8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 H7C1W4 665 aa8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 STARD3NLO95772 234 aa8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 HCLS1P14317 486 aaPredicted RBP8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 DBNDD2Q9BQY9 259 aa8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 N4BP2Q86UW6 1770 aaPredicted RBP8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 IFIT2P09913 472 aaKnown RBP8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 CPA1P15085 419 aa8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 RBM25P49756 843 aaKnown RBP8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 CLASRPQ8N2M8 674 aaKnown RBP8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 FAM227BQ96M60 508 aa8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 NRAPQ86VF7 1730 aa8.58□□□□□ -1.04
LYSMD3-201ENST00000315948 TCIRG1Q13488 830 aa8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 MEX3CQ5U5Q3 659 aaKnown RBP8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 BICDL1Q6ZP65 573 aa8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 STAP2Q9UGK3 403 aa8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 PAPPAQ13219 1627 aa8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 ATG9AQ7Z3C6 839 aa8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 DZIP3Q86Y13 1208 aaKnown RBP8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 LINC00116Q8NCU8 138 aa8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 UPF3BQ9BZI7 483 aaKnown RBP8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 PI16Q6UXB8 463 aa8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 CHAMP1Q96JM3 812 aa8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 TAF6LQ9Y6J9 622 aa8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 AFDNP55196 1824 aaKnown RBP8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 PALLDQ8WX93 1383 aa8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 NEUROD6Q96NK8 337 aa8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 ESYT1Q9BSJ8 1104 aa8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 ISCA1Q9BUE6 129 aa8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 GREM2Q9H772 168 aa8.57□□□□□ -1.04
LYSMD3-201ENST00000315948 RAB11FIP3O75154 756 aa8.56□□□□□ -1.04
LYSMD3-201ENST00000315948 RABL6Q3YEC7 729 aaPredicted RBP8.56□□□□□ -1.04
LYSMD3-201ENST00000315948 HELBQ8NG08 1087 aaPredicted RBP8.56□□□□□ -1.04
LYSMD3-201ENST00000315948 AFF2P51816 1311 aa8.56□□□□□ -1.04
LYSMD3-201ENST00000315948 KIF6Q6ZMV9 814 aa8.56□□□□□ -1.04
LYSMD3-201ENST00000315948 NLRP10Q86W26 655 aa8.56□□□□□ -1.04
LYSMD3-201ENST00000315948 SEC62Q99442 399 aaKnown RBP8.56□□□□□ -1.04
LYSMD3-201ENST00000315948 CHMP4AQ9BY43 222 aa8.56□□□□□ -1.04
LYSMD3-201ENST00000315948 JCADQ9P266 1359 aa8.56□□□□□ -1.04
LYSMD3-201ENST00000315948 MAP3K15Q6ZN16 1313 aa8.56□□□□□ -1.04
LYSMD3-201ENST00000315948 ADORA1P30542 326 aa8.56□□□□□ -1.04
LYSMD3-201ENST00000315948 DNAJC2Q99543 621 aaKnown RBP8.56□□□□□ -1.04
LYSMD3-201ENST00000315948 ANTXR1Q9H6X2 564 aa8.56□□□□□ -1.04
LYSMD3-201ENST00000315948 MYH14Q7Z406 1995 aaKnown RBP8.56□□□□□ -1.04
LYSMD3-201ENST00000315948 PTH1RQ03431 593 aa8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 NFKBIBQ15653 356 aa8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 SNRKQ9NRH2 765 aa8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 SRP68Q9UHB9 627 aaKnown RBP8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 TRMT112Q9UI30 125 aaKnown RBP8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 LAMB4A4D0S4 1761 aa8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 ERC2O15083 957 aa8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 HSP90AB3PQ58FF7 597 aa8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 GIGYF2Q6Y7W6 1299 aaKnown RBP8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 C3orf67Q6ZVT6 689 aa8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 DDX46Q7L014 1031 aaKnown RBP8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 FNBP4Q8N3X1 1017 aaPredicted RBP8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 ECHDC1Q9NTX5 307 aa8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 VPS72Q15906 364 aa8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 TNNI3KQ59H18 835 aa8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 SUSD4Q5VX71 490 aa8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 CCDC129Q6ZRS4 1044 aa8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 BARGINQ6ZT62 677 aa8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 RASEFQ8IZ41 740 aa8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 SEC31BQ9NQW1 1179 aa8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 FPGT-TNNI3KV9GXZ4 949 aa8.55□□□□□ -1.04
LYSMD3-201ENST00000315948 PKP1Q13835 747 aa8.54□□□□□ -1.04
LYSMD3-201ENST00000315948 CCDC191Q8NCU4 936 aa8.54□□□□□ -1.04
LYSMD3-201ENST00000315948 COPRSQ9NQ92 184 aa8.54□□□□□ -1.04
LYSMD3-201ENST00000315948 TJP1Q07157 1748 aa8.54□□□□□ -1.04
LYSMD3-201ENST00000315948 A0A0D9SFI3 127 aa8.54□□□□□ -1.04
LYSMD3-201ENST00000315948 PHF14O94880 888 aa8.54□□□□□ -1.04
LYSMD3-201ENST00000315948 EIF5P55010 431 aaKnown RBP8.54□□□□□ -1.04
LYSMD3-201ENST00000315948 ZNF589Q86UQ0 364 aaPredicted RBP8.54□□□□□ -1.04
LYSMD3-201ENST00000315948 VSIG10Q8N0Z9 540 aa8.54□□□□□ -1.04
LYSMD3-201ENST00000315948 NUP188Q5SRE5 1749 aa8.54□□□□□ -1.04
LYSMD3-201ENST00000315948 A0A0G2JLW4 131 aa8.54□□□□□ -1.04
LYSMD3-201ENST00000315948 CCDC87Q9NVE4 849 aa8.54□□□□□ -1.04
LYSMD3-201ENST00000315948 THRAP3Q9Y2W1 955 aaKnown RBP8.54□□□□□ -1.04
LYSMD3-201ENST00000315948 SCARF1Q14162 830 aa8.54□□□□□ -1.04
LYSMD3-201ENST00000315948 COL4A1P02462 1669 aa8.53□□□□□ -1.04
LYSMD3-201ENST00000315948 ZGPATQ8N5A5 531 aaKnown RBP8.53□□□□□ -1.04
LYSMD3-201ENST00000315948 TCEANC2Q96MN5 208 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms