RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 EIF4A1P60842 406 aaKnown RBP19.27■□□□□ 0.68
CCDC8-201ENST00000307522 GABPB1Q06547 395 aaPredicted RBP19.27■□□□□ 0.68
CCDC8-201ENST00000307522 FERMT3Q86UX7 667 aa19.27■□□□□ 0.68
CCDC8-201ENST00000307522 KRT222Q8N1A0 295 aa19.27■□□□□ 0.68
CCDC8-201ENST00000307522 XRN1Q8IZH2 1706 aaKnown RBP19.27■□□□□ 0.68
CCDC8-201ENST00000307522 ANKARQ7Z5J8 1434 aa19.27■□□□□ 0.68
CCDC8-201ENST00000307522 CCDC66A2RUB6 948 aa19.27■□□□□ 0.68
CCDC8-201ENST00000307522 IL25Q9H293 177 aa19.27■□□□□ 0.68
CCDC8-201ENST00000307522 FBXO38Q6PIJ6 1188 aa19.27■□□□□ 0.67
CCDC8-201ENST00000307522 TRIM5Q9C035 493 aa19.27■□□□□ 0.67
CCDC8-201ENST00000307522 PRDM11Q9NQV5 511 aa19.27■□□□□ 0.67
CCDC8-201ENST00000307522 RTL1A6NKG5 1358 aa19.26■□□□□ 0.67
CCDC8-201ENST00000307522 RNMTO43148 476 aaKnown RBP19.26■□□□□ 0.67
CCDC8-201ENST00000307522 POLR3GO15318 223 aaPredicted RBP19.26■□□□□ 0.67
CCDC8-201ENST00000307522 PTCD1O75127 700 aaKnown RBP19.26■□□□□ 0.67
CCDC8-201ENST00000307522 ANKRD44Q8N8A2 993 aa19.26■□□□□ 0.67
CCDC8-201ENST00000307522 RGS12O14924 1447 aa19.26■□□□□ 0.67
CCDC8-201ENST00000307522 PXDNQ92626 1479 aa19.25■□□□□ 0.67
CCDC8-201ENST00000307522 A0A087WWV3 80 aa19.25■□□□□ 0.67
CCDC8-201ENST00000307522 KDM4FA0A1W2PPD8 638 aa19.25■□□□□ 0.67
CCDC8-201ENST00000307522 FBXW7Q969H0 707 aa19.25■□□□□ 0.67
CCDC8-201ENST00000307522 C1orf167Q5SNV9 1468 aa19.25■□□□□ 0.67
CCDC8-201ENST00000307522 VPS37CA5D8V6 355 aaPredicted RBP19.25■□□□□ 0.67
CCDC8-201ENST00000307522 HNRNPH2P55795 449 aaKnown RBP19.25■□□□□ 0.67
CCDC8-201ENST00000307522 TOM1L2Q6ZVM7 507 aa19.25■□□□□ 0.67
CCDC8-201ENST00000307522 NEK11Q8NG66 645 aa19.25■□□□□ 0.67
CCDC8-201ENST00000307522 KIAA0232Q92628 1395 aa19.24■□□□□ 0.67
CCDC8-201ENST00000307522 GNAI2P04899 355 aa19.24■□□□□ 0.67
CCDC8-201ENST00000307522 USP44Q9H0E7 712 aa19.24■□□□□ 0.67
CCDC8-201ENST00000307522 WDR33Q9C0J8 1336 aaKnown RBP19.23■□□□□ 0.67
CCDC8-201ENST00000307522 UBTFL1P0CB47 393 aaPredicted RBP19.23■□□□□ 0.67
CCDC8-201ENST00000307522 BRPF1P55201 1214 aaPredicted RBP19.23■□□□□ 0.67
CCDC8-201ENST00000307522 PA2G4Q9UQ80 394 aaKnown RBP19.23■□□□□ 0.67
CCDC8-201ENST00000307522 SMTNL1A8MU46 457 aa19.23■□□□□ 0.67
CCDC8-201ENST00000307522 RBM6P78332 1123 aaKnown RBP19.23■□□□□ 0.67
CCDC8-201ENST00000307522 UNC5CLQ8IV45 518 aa19.23■□□□□ 0.67
CCDC8-201ENST00000307522 KLHDC4Q8TBB5 520 aa19.23■□□□□ 0.67
CCDC8-201ENST00000307522 SIL1Q9H173 461 aa19.23■□□□□ 0.67
CCDC8-201ENST00000307522 MORC2Q9Y6X9 1032 aaPredicted RBP19.23■□□□□ 0.67
CCDC8-201ENST00000307522 ERBB3P21860 1342 aa19.23■□□□□ 0.67
CCDC8-201ENST00000307522 GOLGA6L6A8MZA4 724 aa19.23■□□□□ 0.67
CCDC8-201ENST00000307522 SURF6O75683 361 aaKnown RBP19.23■□□□□ 0.67
CCDC8-201ENST00000307522 LRRN4CLQ8ND94 238 aa19.22■□□□□ 0.67
CCDC8-201ENST00000307522 CACTINQ8WUQ7 758 aaKnown RBP19.22■□□□□ 0.67
CCDC8-201ENST00000307522 MAP3K2Q9Y2U5 619 aa19.22■□□□□ 0.67
CCDC8-201ENST00000307522 SYT1P21579 422 aa19.22■□□□□ 0.67
CCDC8-201ENST00000307522 CCDC144BQ3MJ40 725 aa19.22■□□□□ 0.67
CCDC8-201ENST00000307522 AKAP4Q5JQC9 854 aa19.22■□□□□ 0.67
CCDC8-201ENST00000307522 CCDC144CPQ8IYA2 1237 aa19.22■□□□□ 0.67
CCDC8-201ENST00000307522 OS9Q13438 667 aaPredicted RBP19.21■□□□□ 0.67
CCDC8-201ENST00000307522 BRINP3Q76B58 766 aa19.21■□□□□ 0.67
CCDC8-201ENST00000307522 DNAJC2Q99543 621 aaKnown RBP19.21■□□□□ 0.67
CCDC8-201ENST00000307522 PTPRCP08575 1304 aa19.21■□□□□ 0.67
CCDC8-201ENST00000307522 SRGAP3O43295 1099 aa19.21■□□□□ 0.67
CCDC8-201ENST00000307522 CUL4AQ13619 759 aa19.21■□□□□ 0.67
CCDC8-201ENST00000307522 CEP135Q66GS9 1140 aa19.21■□□□□ 0.67
CCDC8-201ENST00000307522 TNNT3P45378 269 aaPredicted RBP19.21■□□□□ 0.67
CCDC8-201ENST00000307522 UBE2HP62256 183 aa19.21■□□□□ 0.67
CCDC8-201ENST00000307522 GORABQ5T7V8 394 aa19.21■□□□□ 0.67
CCDC8-201ENST00000307522 PPP1R42Q7Z4L9 355 aa19.21■□□□□ 0.67
CCDC8-201ENST00000307522 ATP5J2-PTCD1G3V325 749 aa19.2■□□□□ 0.66
CCDC8-201ENST00000307522 ZSCAN25Q6NSZ9 544 aa19.2■□□□□ 0.66
CCDC8-201ENST00000307522 CADPS2Q86UW7 1296 aa19.2■□□□□ 0.66
CCDC8-201ENST00000307522 USP16Q9Y5T5 823 aa19.2■□□□□ 0.66
CCDC8-201ENST00000307522 FMN2Q9NZ56 1722 aa19.2■□□□□ 0.66
CCDC8-201ENST00000307522 PDE1AP54750 535 aa19.2■□□□□ 0.66
CCDC8-201ENST00000307522 ESYT1Q9BSJ8 1104 aa19.2■□□□□ 0.66
CCDC8-201ENST00000307522 RGPD2P0DJD1 1756 aa19.2■□□□□ 0.66
CCDC8-201ENST00000307522 RPAP1Q9BWH6 1393 aaPredicted RBP19.2■□□□□ 0.66
CCDC8-201ENST00000307522 ANO6Q4KMQ2 910 aa19.19■□□□□ 0.66
CCDC8-201ENST00000307522 FUCA2Q9BTY2 467 aa19.19■□□□□ 0.66
CCDC8-201ENST00000307522 C9orf78Q9NZ63 289 aaPredicted RBP19.19■□□□□ 0.66
CCDC8-201ENST00000307522 CHD2O14647 1828 aaKnown RBP19.19■□□□□ 0.66
CCDC8-201ENST00000307522 LARGE1O95461 756 aa19.19■□□□□ 0.66
CCDC8-201ENST00000307522 TATP17735 454 aaPredicted RBP19.19■□□□□ 0.66
CCDC8-201ENST00000307522 LIG1P18858 919 aa19.19■□□□□ 0.66
CCDC8-201ENST00000307522 CCT4P50991 539 aaKnown RBP19.19■□□□□ 0.66
CCDC8-201ENST00000307522 ZNF496Q96IT1 587 aaPredicted RBP19.19■□□□□ 0.66
CCDC8-201ENST00000307522 STX6O43752 255 aa19.19■□□□□ 0.66
CCDC8-201ENST00000307522 ZSCAN22P10073 491 aaPredicted RBP19.19■□□□□ 0.66
CCDC8-201ENST00000307522 FILIP1Q7Z7B0 1213 aa19.19■□□□□ 0.66
CCDC8-201ENST00000307522 ZNF446Q9NWS9 450 aa19.19■□□□□ 0.66
CCDC8-201ENST00000307522 GYS2P54840 703 aa19.18■□□□□ 0.66
CCDC8-201ENST00000307522 IRX3P78415 501 aaPredicted RBP19.18■□□□□ 0.66
CCDC8-201ENST00000307522 CCDC83Q8IWF9 413 aa19.18■□□□□ 0.66
CCDC8-201ENST00000307522 CYP27B1O15528 508 aa19.18■□□□□ 0.66
CCDC8-201ENST00000307522 NOL10Q9BSC4 688 aaKnown RBP19.18■□□□□ 0.66
CCDC8-201ENST00000307522 SLAIN2Q9P270 581 aa19.18■□□□□ 0.66
CCDC8-201ENST00000307522 NWD1Q149M9 1564 aa19.18■□□□□ 0.66
CCDC8-201ENST00000307522 EVA1CP58658 441 aa19.17■□□□□ 0.66
CCDC8-201ENST00000307522 TFIP11Q9UBB9 837 aaKnown RBP19.17■□□□□ 0.66
CCDC8-201ENST00000307522 CCDC192P0DO97 292 aa19.17■□□□□ 0.66
CCDC8-201ENST00000307522 MCCP23508 829 aa19.17■□□□□ 0.66
CCDC8-201ENST00000307522 RPAP2Q8IXW5 612 aaPredicted RBP19.17■□□□□ 0.66
CCDC8-201ENST00000307522 ATP10DQ9P241 1426 aa19.17■□□□□ 0.66
CCDC8-201ENST00000307522 ADAMTSL3P82987 1691 aa19.17■□□□□ 0.66
CCDC8-201ENST00000307522 TRIM66O15016 1216 aa19.17■□□□□ 0.66
CCDC8-201ENST00000307522 ERCC6LQ2NKX8 1250 aa19.17■□□□□ 0.66
CCDC8-201ENST00000307522 DNAAF4Q8WXU2 420 aa19.17■□□□□ 0.66
CCDC8-201ENST00000307522 GIGYF1O75420 1035 aaPredicted RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms