RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 ANKRD36CQ5JPF3 1778 aa21.7■■□□□ 1.06
KRT28-201ENST00000306658 GPTP24298 496 aa21.69■■□□□ 1.06
KRT28-201ENST00000306658 SLC27A3Q5K4L6 730 aa21.69■■□□□ 1.06
KRT28-201ENST00000306658 ZNF34Q8IZ26 560 aa21.69■■□□□ 1.06
KRT28-201ENST00000306658 RGL2O15211 777 aa21.69■■□□□ 1.06
KRT28-201ENST00000306658 RTL5Q5HYW3 569 aaPredicted RBP21.69■■□□□ 1.06
KRT28-201ENST00000306658 POTEAQ6S8J7 498 aa21.69■■□□□ 1.06
KRT28-201ENST00000306658 BACH2Q9BYV9 841 aa21.69■■□□□ 1.06
KRT28-201ENST00000306658 TAF1LQ8IZX4 1826 aa21.68■■□□□ 1.06
KRT28-201ENST00000306658 SMARCA5O60264 1052 aaPredicted RBP21.68■■□□□ 1.06
KRT28-201ENST00000306658 CLEC4GQ6UXB4 293 aa21.68■■□□□ 1.06
KRT28-201ENST00000306658 RTCBQ9Y3I0 505 aaKnown RBP21.68■■□□□ 1.06
KRT28-201ENST00000306658 GNPATO15228 680 aa21.67■■□□□ 1.06
KRT28-201ENST00000306658 FOXO4P98177 505 aa21.67■■□□□ 1.06
KRT28-201ENST00000306658 OS9Q13438 667 aaPredicted RBP21.67■■□□□ 1.06
KRT28-201ENST00000306658 ERC1Q8IUD2 1116 aa21.67■■□□□ 1.06
KRT28-201ENST00000306658 KIF1BPQ96EK5 621 aa21.67■■□□□ 1.06
KRT28-201ENST00000306658 LMBR1LQ6UX01 489 aa21.66■■□□□ 1.06
KRT28-201ENST00000306658 BCL11AQ9H165 835 aa21.66■■□□□ 1.06
KRT28-201ENST00000306658 CDHR2Q9BYE9 1310 aa21.66■■□□□ 1.06
KRT28-201ENST00000306658 PARP10Q53GL7 1025 aa21.66■■□□□ 1.06
KRT28-201ENST00000306658 PLEKHM2Q8IWE5 1019 aa21.66■■□□□ 1.06
KRT28-201ENST00000306658 RHPN1Q8TCX5 695 aa21.66■■□□□ 1.06
KRT28-201ENST00000306658 FAM89AQ96GI7 184 aa21.66■■□□□ 1.06
KRT28-201ENST00000306658 TRMT112Q9UI30 125 aaKnown RBP21.66■■□□□ 1.06
KRT28-201ENST00000306658 G3BP1Q13283 466 aaKnown RBP eCLIP21.65■■□□□ 1.06
KRT28-201ENST00000306658 C16orf71Q8IYS4 520 aaPredicted RBP21.65■■□□□ 1.06
KRT28-201ENST00000306658 AK7Q96M32 723 aa21.65■■□□□ 1.06
KRT28-201ENST00000306658 PLA2G12BQ9BX93 195 aa21.65■■□□□ 1.06
KRT28-201ENST00000306658 LRRC4BQ9NT99 713 aa21.65■■□□□ 1.06
KRT28-201ENST00000306658 PA2G4Q9UQ80 394 aaKnown RBP21.64■■□□□ 1.05
KRT28-201ENST00000306658 C4BP0C0L5 1744 aa21.64■■□□□ 1.05
KRT28-201ENST00000306658 UBN2Q6ZU65 1347 aa21.64■■□□□ 1.05
KRT28-201ENST00000306658 C8orf34Q49A92 452 aa21.63■■□□□ 1.05
KRT28-201ENST00000306658 COPRSQ9NQ92 184 aa21.63■■□□□ 1.05
KRT28-201ENST00000306658 NARFQ9UHQ1 456 aa21.63■■□□□ 1.05
KRT28-201ENST00000306658 CHMP3Q9Y3E7 222 aa21.63■■□□□ 1.05
KRT28-201ENST00000306658 EP400Q96L91 3159 aa21.63■■□□□ 1.05
KRT28-201ENST00000306658 PLSCR1O15162 318 aa21.63■■□□□ 1.05
KRT28-201ENST00000306658 ZPR1O75312 459 aa21.63■■□□□ 1.05
KRT28-201ENST00000306658 BMP2KLQ5H9B9 411 aa21.63■■□□□ 1.05
KRT28-201ENST00000306658 NIP7Q9Y221 180 aaKnown RBP eCLIP21.63■■□□□ 1.05
KRT28-201ENST00000306658 BCORQ6W2J9 1755 aa21.62■■□□□ 1.05
KRT28-201ENST00000306658 UTP14AQ9BVJ6 771 aaKnown RBP21.62■■□□□ 1.05
KRT28-201ENST00000306658 RBM19Q9Y4C8 960 aaKnown RBP21.62■■□□□ 1.05
KRT28-201ENST00000306658 APBA3O96018 575 aa21.61■■□□□ 1.05
KRT28-201ENST00000306658 RFX5P48382 616 aaPredicted RBP21.61■■□□□ 1.05
KRT28-201ENST00000306658 TRAPPC3LQ5T215 181 aa21.61■■□□□ 1.05
KRT28-201ENST00000306658 IRS4O14654 1257 aaPredicted RBP21.6■■□□□ 1.05
KRT28-201ENST00000306658 HSP90B1P14625 803 aaKnown RBP21.6■■□□□ 1.05
KRT28-201ENST00000306658 ADRA2BP18089 450 aa21.6■■□□□ 1.05
KRT28-201ENST00000306658 PTPN12Q05209 780 aaKnown RBP21.6■■□□□ 1.05
KRT28-201ENST00000306658 TXNRD1Q16881 649 aa21.6■■□□□ 1.05
KRT28-201ENST00000306658 SUSD4Q5VX71 490 aa21.6■■□□□ 1.05
KRT28-201ENST00000306658 IL1RAPL2Q9NP60 686 aa21.6■■□□□ 1.05
KRT28-201ENST00000306658 CLASRPQ8N2M8 674 aaKnown RBP21.6■■□□□ 1.05
KRT28-201ENST00000306658 OTUD7AQ8TE49 926 aaPredicted RBP21.6■■□□□ 1.05
KRT28-201ENST00000306658 ARHGEF1Q92888 912 aaKnown RBP21.6■■□□□ 1.05
KRT28-201ENST00000306658 OSBPL3Q9H4L5 887 aa21.6■■□□□ 1.05
KRT28-201ENST00000306658 SH3TC1Q8TE82 1336 aa21.59■■□□□ 1.05
KRT28-201ENST00000306658 PDE8AO60658 829 aa21.59■■□□□ 1.05
KRT28-201ENST00000306658 CSF1RP07333 972 aa21.59■■□□□ 1.05
KRT28-201ENST00000306658 RFC4P35249 363 aa21.59■■□□□ 1.05
KRT28-201ENST00000306658 USPL1Q5W0Q7 1092 aa21.59■■□□□ 1.05
KRT28-201ENST00000306658 KLHDC4Q8TBB5 520 aa21.59■■□□□ 1.05
KRT28-201ENST00000306658 SIL1Q9H173 461 aa21.59■■□□□ 1.05
KRT28-201ENST00000306658 PDE1AP54750 535 aa21.58■■□□□ 1.05
KRT28-201ENST00000306658 CCDC57Q2TAC2 916 aa21.58■■□□□ 1.05
KRT28-201ENST00000306658 SYNE4Q8N205 404 aa21.58■■□□□ 1.05
KRT28-201ENST00000306658 MX1P20591 662 aa21.57■■□□□ 1.04
KRT28-201ENST00000306658 TTC22Q5TAA0 569 aa21.57■■□□□ 1.04
KRT28-201ENST00000306658 SMIM5Q71RC9 77 aa21.57■■□□□ 1.04
KRT28-201ENST00000306658 SCN7AQ01118 1682 aa21.57■■□□□ 1.04
KRT28-201ENST00000306658 CTSWP56202 376 aa21.56■■□□□ 1.04
KRT28-201ENST00000306658 PROM2Q8N271 834 aa21.56■■□□□ 1.04
KRT28-201ENST00000306658 SALL3Q9BXA9 1300 aa21.56■■□□□ 1.04
KRT28-201ENST00000306658 FAM177BA6PVY3 158 aa21.56■■□□□ 1.04
KRT28-201ENST00000306658 PHF14O94880 888 aa21.56■■□□□ 1.04
KRT28-201ENST00000306658 SASH1O94885 1247 aa21.56■■□□□ 1.04
KRT28-201ENST00000306658 BCL2L12Q9HB09 334 aa21.56■■□□□ 1.04
KRT28-201ENST00000306658 STAP2Q9UGK3 403 aa21.56■■□□□ 1.04
KRT28-201ENST00000306658 SRP68Q9UHB9 627 aaKnown RBP21.56■■□□□ 1.04
KRT28-201ENST00000306658 NTSR2O95665 410 aa21.55■■□□□ 1.04
KRT28-201ENST00000306658 IFIT5Q13325 482 aaKnown RBP21.55■■□□□ 1.04
KRT28-201ENST00000306658 AMIGO3Q86WK7 504 aa21.55■■□□□ 1.04
KRT28-201ENST00000306658 TTLL11Q8NHH1 800 aa21.55■■□□□ 1.04
KRT28-201ENST00000306658 USP42Q9H9J4 1324 aaKnown RBP21.55■■□□□ 1.04
KRT28-201ENST00000306658 MYH3P11055 1940 aa21.54■■□□□ 1.04
KRT28-201ENST00000306658 AOX1Q06278 1338 aa21.54■■□□□ 1.04
KRT28-201ENST00000306658 SSFA2P28290 1259 aa21.54■■□□□ 1.04
KRT28-201ENST00000306658 SETDB2Q96T68 719 aa21.54■■□□□ 1.04
KRT28-201ENST00000306658 FBXO3Q9UK99 471 aa21.54■■□□□ 1.04
KRT28-201ENST00000306658 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.53■■□□□ 1.04
KRT28-201ENST00000306658 TBC1D9BQ66K14 1250 aa21.53■■□□□ 1.04
KRT28-201ENST00000306658 NUTM1Q86Y26 1132 aa21.53■■□□□ 1.04
KRT28-201ENST00000306658 CIAO1O76071 339 aa21.53■■□□□ 1.04
KRT28-201ENST00000306658 IFIT2P09913 472 aaKnown RBP21.53■■□□□ 1.04
KRT28-201ENST00000306658 GSPT1P15170 499 aaKnown RBP21.53■■□□□ 1.04
KRT28-201ENST00000306658 BICDL1Q6ZP65 573 aa21.53■■□□□ 1.04
KRT28-201ENST00000306658 NYXQ9GZU5 481 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms