RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 FKBP15Q5T1M5 1219 aa18.48■□□□□ 0.55
USP42-201ENST00000306177 C19orf44Q9H6X5 657 aa18.48■□□□□ 0.55
USP42-201ENST00000306177 FBXO3Q9UK99 471 aa18.48■□□□□ 0.55
USP42-201ENST00000306177 PHACTR3Q96KR7 559 aa18.48■□□□□ 0.55
USP42-201ENST00000306177 PDE1AP54750 535 aa18.48■□□□□ 0.55
USP42-201ENST00000306177 UHRF1BP1Q6BDS2 1440 aa18.48■□□□□ 0.55
USP42-201ENST00000306177 TRPM2O94759 1503 aa18.48■□□□□ 0.55
USP42-201ENST00000306177 MFSD6Q6ZSS7 791 aa18.48■□□□□ 0.55
USP42-201ENST00000306177 CKAP2LQ8IYA6 745 aa18.48■□□□□ 0.55
USP42-201ENST00000306177 TAF4BQ92750 862 aa18.48■□□□□ 0.55
USP42-201ENST00000306177 KIF5BP33176 963 aa18.47■□□□□ 0.55
USP42-201ENST00000306177 MATR3P43243 847 aaKnown RBP eCLIP18.47■□□□□ 0.55
USP42-201ENST00000306177 ATP8B2P98198 1209 aa18.47■□□□□ 0.55
USP42-201ENST00000306177 KSR2Q6VAB6 950 aa18.47■□□□□ 0.55
USP42-201ENST00000306177 EYA1Q99502 592 aa18.47■□□□□ 0.55
USP42-201ENST00000306177 TOP1P11387 765 aaKnown RBP18.47■□□□□ 0.55
USP42-201ENST00000306177 HAND2P61296 217 aa18.47■□□□□ 0.55
USP42-201ENST00000306177 PDE4BQ07343 736 aa18.47■□□□□ 0.55
USP42-201ENST00000306177 TBX22Q9Y458 520 aa18.47■□□□□ 0.55
USP42-201ENST00000306177 C6orf229H3BNL8 230 aa18.47■□□□□ 0.55
USP42-201ENST00000306177 BAG4O95429 457 aaKnown RBP18.47■□□□□ 0.55
USP42-201ENST00000306177 BAG3O95817 575 aa18.47■□□□□ 0.55
USP42-201ENST00000306177 TSPYL6Q8N831 410 aa18.47■□□□□ 0.55
USP42-201ENST00000306177 CABLES1Q8TDN4 633 aa18.47■□□□□ 0.55
USP42-201ENST00000306177 ORC3Q9UBD5 711 aaPredicted RBP18.47■□□□□ 0.55
USP42-201ENST00000306177 GRM8O00222 908 aa18.46■□□□□ 0.55
USP42-201ENST00000306177 VAMP4O75379 141 aa18.46■□□□□ 0.55
USP42-201ENST00000306177 SPTY2D1Q68D10 685 aaPredicted RBP18.46■□□□□ 0.55
USP42-201ENST00000306177 METAP2P50579 478 aaKnown RBP eCLIP18.46■□□□□ 0.55
USP42-201ENST00000306177 PTPN14Q15678 1187 aa18.46■□□□□ 0.55
USP42-201ENST00000306177 CCDC152Q4G0S7 254 aa18.46■□□□□ 0.55
USP42-201ENST00000306177 CCDC148Q8NFR7 591 aa18.46■□□□□ 0.55
USP42-201ENST00000306177 CCDC12Q8WUD4 166 aaPredicted RBP18.46■□□□□ 0.55
USP42-201ENST00000306177 CLIP2Q9UDT6 1046 aa18.46■□□□□ 0.55
USP42-201ENST00000306177 ZFYP08048 801 aaPredicted RBP18.46■□□□□ 0.55
USP42-201ENST00000306177 CUL5Q93034 780 aa18.46■□□□□ 0.55
USP42-201ENST00000306177 GDPD2Q9HCC8 539 aa18.46■□□□□ 0.55
USP42-201ENST00000306177 TFIP11Q9UBB9 837 aaKnown RBP18.46■□□□□ 0.55
USP42-201ENST00000306177 SPA17Q15506 151 aa18.46■□□□□ 0.55
USP42-201ENST00000306177 PAF1Q8N7H5 531 aa18.46■□□□□ 0.55
USP42-201ENST00000306177 UBXN4Q92575 508 aa18.46■□□□□ 0.55
USP42-201ENST00000306177 MAP3K19Q56UN5 1328 aa18.45■□□□□ 0.54
USP42-201ENST00000306177 FGFR1OPO95684 399 aaKnown RBP18.45■□□□□ 0.54
USP42-201ENST00000306177 GCP02774 474 aa18.45■□□□□ 0.54
USP42-201ENST00000306177 MICU3Q86XE3 530 aa18.45■□□□□ 0.54
USP42-201ENST00000306177 TNNQ9UQP3 1299 aa18.45■□□□□ 0.54
USP42-201ENST00000306177 MCM5P33992 734 aa18.44■□□□□ 0.54
USP42-201ENST00000306177 TMX3Q96JJ7 454 aa18.44■□□□□ 0.54
USP42-201ENST00000306177 MAP3K5Q99683 1374 aa18.44■□□□□ 0.54
USP42-201ENST00000306177 TSPY2A6NKD2 308 aa18.44■□□□□ 0.54
USP42-201ENST00000306177 KIF20AO95235 890 aa18.44■□□□□ 0.54
USP42-201ENST00000306177 NEFHP12036 1026 aa18.44■□□□□ 0.54
USP42-201ENST00000306177 CCDC191Q8NCU4 936 aa18.44■□□□□ 0.54
USP42-201ENST00000306177 TSPYL1Q9H0U9 437 aa18.44■□□□□ 0.54
USP42-201ENST00000306177 SAMD9Q5K651 1589 aa18.44■□□□□ 0.54
USP42-201ENST00000306177 ANAPC15P60006 121 aa18.44■□□□□ 0.54
USP42-201ENST00000306177 KRT24Q2M2I5 525 aa18.44■□□□□ 0.54
USP42-201ENST00000306177 UBE2HP62256 183 aa18.44■□□□□ 0.54
USP42-201ENST00000306177 USP25Q9UHP3 1055 aa18.44■□□□□ 0.54
USP42-201ENST00000306177 STX1AQ16623 288 aa18.43■□□□□ 0.54
USP42-201ENST00000306177 JAKMIP3Q5VZ66 844 aa18.43■□□□□ 0.54
USP42-201ENST00000306177 ESYT1Q9BSJ8 1104 aa18.43■□□□□ 0.54
USP42-201ENST00000306177 CCDC144CPQ8IYA2 1237 aa18.43■□□□□ 0.54
USP42-201ENST00000306177 ZSCAN16Q9H4T2 348 aaPredicted RBP18.43■□□□□ 0.54
USP42-201ENST00000306177 KAT14Q9H8E8 782 aa18.43■□□□□ 0.54
USP42-201ENST00000306177 CEP170Q5SW79 1584 aa18.43■□□□□ 0.54
USP42-201ENST00000306177 RLBP1P12271 317 aa18.43■□□□□ 0.54
USP42-201ENST00000306177 DESP17661 470 aa18.43■□□□□ 0.54
USP42-201ENST00000306177 HOXC9P31274 260 aa18.43■□□□□ 0.54
USP42-201ENST00000306177 CACNA2D4Q7Z3S7 1137 aa18.42■□□□□ 0.54
USP42-201ENST00000306177 IL15P40933 162 aaPredicted RBP18.42■□□□□ 0.54
USP42-201ENST00000306177 LMBR1LQ6UX01 489 aa18.42■□□□□ 0.54
USP42-201ENST00000306177 POTEJP0CG39 1038 aa18.42■□□□□ 0.54
USP42-201ENST00000306177 RFC4P35249 363 aa18.42■□□□□ 0.54
USP42-201ENST00000306177 KLHL40Q2TBA0 621 aa18.42■□□□□ 0.54
USP42-201ENST00000306177 BRF1Q92994 677 aa18.42■□□□□ 0.54
USP42-201ENST00000306177 ATP10AO60312 1499 aa18.42■□□□□ 0.54
USP42-201ENST00000306177 KIF5CO60282 957 aa18.42■□□□□ 0.54
USP42-201ENST00000306177 SEPT7Q16181 437 aaKnown RBP18.42■□□□□ 0.54
USP42-201ENST00000306177 ATP2B3Q16720 1220 aa18.42■□□□□ 0.54
USP42-201ENST00000306177 NFATC2IPQ8NCF5 419 aa18.42■□□□□ 0.54
USP42-201ENST00000306177 LINS1Q8NG48 757 aa18.42■□□□□ 0.54
USP42-201ENST00000306177 PYM1Q9BRP8 204 aaKnown RBP18.42■□□□□ 0.54
USP42-201ENST00000306177 EHMT1Q9H9B1 1298 aa18.42■□□□□ 0.54
USP42-201ENST00000306177 CRNKL1Q9BZJ0 848 aaKnown RBP18.41■□□□□ 0.54
USP42-201ENST00000306177 NEMFO60524 1076 aa18.41■□□□□ 0.54
USP42-201ENST00000306177 IL2RBP14784 551 aa18.41■□□□□ 0.54
USP42-201ENST00000306177 KIF18AQ8NI77 898 aa18.41■□□□□ 0.54
USP42-201ENST00000306177 SLC26A6Q9BXS9 759 aa18.41■□□□□ 0.54
USP42-201ENST00000306177 TCP11L1Q9NUJ3 509 aa18.41■□□□□ 0.54
USP42-201ENST00000306177 NBPF6Q5VWK0 638 aa18.41■□□□□ 0.54
USP42-201ENST00000306177 NBPF5PQ86XG9 351 aaPredicted RBP18.41■□□□□ 0.54
USP42-201ENST00000306177 NBPF4Q96M43 638 aa18.41■□□□□ 0.54
USP42-201ENST00000306177 ZSCAN22P10073 491 aaPredicted RBP18.4■□□□□ 0.54
USP42-201ENST00000306177 PKNOX2Q96KN3 472 aa18.4■□□□□ 0.54
USP42-201ENST00000306177 UBA5Q9GZZ9 404 aa18.4■□□□□ 0.54
USP42-201ENST00000306177 NPC1L1Q9UHC9 1359 aa18.4■□□□□ 0.54
USP42-201ENST00000306177 VPS36Q86VN1 386 aa18.4■□□□□ 0.54
USP42-201ENST00000306177 KRI1Q8N9T8 703 aaKnown RBP18.4■□□□□ 0.54
USP42-201ENST00000306177 IP6K1Q92551 441 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms