RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 GLIPR1L2Q4G1C9 344 aa18.13■□□□□ 0.49
CSDC2-201ENST00000306149 ZNF790Q6PG37 636 aa18.13■□□□□ 0.49
CSDC2-201ENST00000306149 A0A0D9SFI3 127 aa18.13■□□□□ 0.49
CSDC2-201ENST00000306149 PHF14O94880 888 aa18.13■□□□□ 0.49
CSDC2-201ENST00000306149 ST3GAL1Q11201 340 aa18.13■□□□□ 0.49
CSDC2-201ENST00000306149 ME3Q16798 604 aa18.13■□□□□ 0.49
CSDC2-201ENST00000306149 XAGE3Q8WTP9 111 aa18.13■□□□□ 0.49
CSDC2-201ENST00000306149 ZSWIM6Q9HCJ5 1215 aa18.13■□□□□ 0.49
CSDC2-201ENST00000306149 DNM1Q05193 864 aaKnown RBP18.13■□□□□ 0.49
CSDC2-201ENST00000306149 CREB3L3Q68CJ9 461 aa18.13■□□□□ 0.49
CSDC2-201ENST00000306149 COPS6Q7L5N1 327 aa18.13■□□□□ 0.49
CSDC2-201ENST00000306149 TMEM87AQ8NBN3 555 aa18.13■□□□□ 0.49
CSDC2-201ENST00000306149 MYD88Q99836 296 aa18.13■□□□□ 0.49
CSDC2-201ENST00000306149 NDUFB9Q9Y6M9 179 aa18.13■□□□□ 0.49
CSDC2-201ENST00000306149 VPS37CA5D8V6 355 aaPredicted RBP18.12■□□□□ 0.49
CSDC2-201ENST00000306149 VPS53Q5VIR6 699 aa18.12■□□□□ 0.49
CSDC2-201ENST00000306149 FSD1Q9BTV5 496 aa18.12■□□□□ 0.49
CSDC2-201ENST00000306149 ZKSCAN1P17029 563 aaPredicted RBP18.11■□□□□ 0.49
CSDC2-201ENST00000306149 RAPGEF4Q8WZA2 1011 aa18.11■□□□□ 0.49
CSDC2-201ENST00000306149 TPCN1Q9ULQ1 816 aa18.11■□□□□ 0.49
CSDC2-201ENST00000306149 PHRF1Q9P1Y6 1649 aaKnown RBP18.11■□□□□ 0.49
CSDC2-201ENST00000306149 NCAPD2Q15021 1401 aa18.11■□□□□ 0.49
CSDC2-201ENST00000306149 MTMR6Q9Y217 621 aa18.11■□□□□ 0.49
CSDC2-201ENST00000306149 ERBB3P21860 1342 aa18.1■□□□□ 0.49
CSDC2-201ENST00000306149 NEURL1BA8MQ27 555 aa18.1■□□□□ 0.49
CSDC2-201ENST00000306149 ZNF496Q96IT1 587 aaPredicted RBP18.1■□□□□ 0.49
CSDC2-201ENST00000306149 HDAC5Q9UQL6 1122 aa18.1■□□□□ 0.49
CSDC2-201ENST00000306149 USP16Q9Y5T5 823 aa18.1■□□□□ 0.49
CSDC2-201ENST00000306149 CHGBP05060 677 aa18.1■□□□□ 0.49
CSDC2-201ENST00000306149 PTMAP06454 111 aaKnown RBP18.1■□□□□ 0.49
CSDC2-201ENST00000306149 PROSER2Q86WR7 435 aaPredicted RBP18.1■□□□□ 0.49
CSDC2-201ENST00000306149 MAP4K1Q92918 833 aa18.1■□□□□ 0.49
CSDC2-201ENST00000306149 LARP1Q6PKG0 1096 aaKnown RBP18.09■□□□□ 0.49
CSDC2-201ENST00000306149 FERMT3Q86UX7 667 aa18.09■□□□□ 0.49
CSDC2-201ENST00000306149 CABLES1Q8TDN4 633 aa18.09■□□□□ 0.49
CSDC2-201ENST00000306149 SLC52A2Q9HAB3 445 aa18.09■□□□□ 0.49
CSDC2-201ENST00000306149 R3HCC1Q9Y3T6 440 aaKnown RBP18.09■□□□□ 0.49
CSDC2-201ENST00000306149 UTYO14607 1347 aa18.09■□□□□ 0.49
CSDC2-201ENST00000306149 RGPD5Q99666 1765 aa18.09■□□□□ 0.49
CSDC2-201ENST00000306149 SLC27A2O14975 620 aa18.09■□□□□ 0.49
CSDC2-201ENST00000306149 HCLS1P14317 486 aaPredicted RBP18.09■□□□□ 0.49
CSDC2-201ENST00000306149 NEXNQ0ZGT2 675 aa18.09■□□□□ 0.49
CSDC2-201ENST00000306149 GCKRQ14397 625 aa18.09■□□□□ 0.49
CSDC2-201ENST00000306149 CSPP1Q1MSJ5 1256 aa18.09■□□□□ 0.49
CSDC2-201ENST00000306149 FAM173BQ6P4H8 233 aa18.09■□□□□ 0.49
CSDC2-201ENST00000306149 ZNF589Q86UQ0 364 aaPredicted RBP18.09■□□□□ 0.49
CSDC2-201ENST00000306149 CCDC9Q9Y3X0 531 aaKnown RBP18.09■□□□□ 0.49
CSDC2-201ENST00000306149 UBE2HP62256 183 aa18.08■□□□□ 0.49
CSDC2-201ENST00000306149 CCDC183Q5T5S1 534 aa18.08■□□□□ 0.49
CSDC2-201ENST00000306149 USP25Q9UHP3 1055 aa18.08■□□□□ 0.49
CSDC2-201ENST00000306149 GIMAP6Q6P9H5 292 aa18.08■□□□□ 0.48
CSDC2-201ENST00000306149 KCNB2Q92953 911 aa18.08■□□□□ 0.48
CSDC2-201ENST00000306149 TM6SF1Q9BZW5 370 aa18.08■□□□□ 0.48
CSDC2-201ENST00000306149 CHMP3Q9Y3E7 222 aa18.08■□□□□ 0.48
CSDC2-201ENST00000306149 ATP5J2-PTCD1G3V325 749 aa18.08■□□□□ 0.48
CSDC2-201ENST00000306149 PTCD1O75127 700 aaKnown RBP18.08■□□□□ 0.48
CSDC2-201ENST00000306149 FAM184AQ8NB25 1140 aa18.08■□□□□ 0.48
CSDC2-201ENST00000306149 NPHP3Q7Z494 1330 aa18.07■□□□□ 0.48
CSDC2-201ENST00000306149 ZNF830Q96NB3 372 aaPredicted RBP18.07■□□□□ 0.48
CSDC2-201ENST00000306149 STK3Q13188 491 aa18.07■□□□□ 0.48
CSDC2-201ENST00000306149 ZSCAN31Q96LW9 406 aaPredicted RBP18.07■□□□□ 0.48
CSDC2-201ENST00000306149 SLIT3O75094 1523 aa18.06■□□□□ 0.48
CSDC2-201ENST00000306149 CSB-PGBD3P0DP91 1061 aa18.06■□□□□ 0.48
CSDC2-201ENST00000306149 CHRNA2Q15822 529 aa18.06■□□□□ 0.48
CSDC2-201ENST00000306149 ANKRD13DQ6ZTN6 518 aa18.06■□□□□ 0.48
CSDC2-201ENST00000306149 SH2B1Q9NRF2 756 aaPredicted RBP18.06■□□□□ 0.48
CSDC2-201ENST00000306149 PHKG2P15735 406 aa18.06■□□□□ 0.48
CSDC2-201ENST00000306149 LARP1BQ659C4 914 aaKnown RBP18.06■□□□□ 0.48
CSDC2-201ENST00000306149 UBE3BQ7Z3V4 1068 aa18.06■□□□□ 0.48
CSDC2-201ENST00000306149 ATP6V1DQ9Y5K8 247 aa18.06■□□□□ 0.48
CSDC2-201ENST00000306149 KDM6AO15550 1401 aaPredicted RBP18.06■□□□□ 0.48
CSDC2-201ENST00000306149 PLCB2Q00722 1185 aa18.05■□□□□ 0.48
CSDC2-201ENST00000306149 UVSSAQ2YD98 709 aa18.05■□□□□ 0.48
CSDC2-201ENST00000306149 METTL22Q9BUU2 404 aaPredicted RBP18.05■□□□□ 0.48
CSDC2-201ENST00000306149 NPHP4O75161 1426 aaPredicted RBP18.05■□□□□ 0.48
CSDC2-201ENST00000306149 TATP17735 454 aaPredicted RBP18.05■□□□□ 0.48
CSDC2-201ENST00000306149 TFCP2Q12800 502 aa18.05■□□□□ 0.48
CSDC2-201ENST00000306149 PDCL3Q9H2J4 239 aa18.05■□□□□ 0.48
CSDC2-201ENST00000306149 DNAJC5Q9H3Z4 198 aa18.05■□□□□ 0.48
CSDC2-201ENST00000306149 DBNLQ9UJU6 430 aaKnown RBP18.05■□□□□ 0.48
CSDC2-201ENST00000306149 OVOS2A0A0G2JMS6 1433 aa18.05■□□□□ 0.48
CSDC2-201ENST00000306149 BLOC1S2Q6QNY1 142 aa18.04■□□□□ 0.48
CSDC2-201ENST00000306149 CDC37L1Q7L3B6 337 aa18.04■□□□□ 0.48
CSDC2-201ENST00000306149 HIP1O00291 1037 aa18.04■□□□□ 0.48
CSDC2-201ENST00000306149 KLHL34Q8N239 644 aa18.04■□□□□ 0.48
CSDC2-201ENST00000306149 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.04■□□□□ 0.48
CSDC2-201ENST00000306149 CCDC129Q6ZRS4 1044 aa18.03■□□□□ 0.48
CSDC2-201ENST00000306149 SEC62Q99442 399 aaKnown RBP18.03■□□□□ 0.48
CSDC2-201ENST00000306149 SIPA1L3O60292 1781 aaPredicted RBP18.03■□□□□ 0.48
CSDC2-201ENST00000306149 LETM1O95202 739 aaPredicted RBP18.03■□□□□ 0.48
CSDC2-201ENST00000306149 DNAJC2Q99543 621 aaKnown RBP18.03■□□□□ 0.48
CSDC2-201ENST00000306149 PSMA5P28066 241 aa18.02■□□□□ 0.48
CSDC2-201ENST00000306149 PTPN12Q05209 780 aaKnown RBP18.02■□□□□ 0.48
CSDC2-201ENST00000306149 TTC5Q8N0Z6 440 aa18.02■□□□□ 0.48
CSDC2-201ENST00000306149 ADCY5O95622 1261 aa18.02■□□□□ 0.48
CSDC2-201ENST00000306149 TOB2Q14106 344 aaPredicted RBP18.02■□□□□ 0.48
CSDC2-201ENST00000306149 CYP27B1O15528 508 aa18.02■□□□□ 0.47
CSDC2-201ENST00000306149 RPS6KB1P23443 525 aa18.02■□□□□ 0.47
CSDC2-201ENST00000306149 LRP10Q7Z4F1 713 aa18.02■□□□□ 0.47
CSDC2-201ENST00000306149 C5P01031 1676 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms