RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 SLFN14P0C7P3 912 aa6.58□□□□□ -1.36
VPS50-202ENST00000305866 NEK4P51957 841 aa6.58□□□□□ -1.36
VPS50-202ENST00000305866 AMOTQ4VCS5 1084 aa6.58□□□□□ -1.36
VPS50-202ENST00000305866 ZNF446Q9NWS9 450 aa6.58□□□□□ -1.36
VPS50-202ENST00000305866 LAMB2P55268 1798 aa6.58□□□□□ -1.36
VPS50-202ENST00000305866 CCDC183Q5T5S1 534 aa6.58□□□□□ -1.36
VPS50-202ENST00000305866 TTC6Q86TZ1 520 aa6.58□□□□□ -1.36
VPS50-202ENST00000305866 PGBD1Q96JS3 809 aa6.58□□□□□ -1.36
VPS50-202ENST00000305866 MIS18AQ9NYP9 233 aa6.58□□□□□ -1.36
VPS50-202ENST00000305866 ST18O60284 1047 aa6.57□□□□□ -1.36
VPS50-202ENST00000305866 GIGYF1O75420 1035 aaPredicted RBP6.57□□□□□ -1.36
VPS50-202ENST00000305866 KCNA6P17658 529 aa6.57□□□□□ -1.36
VPS50-202ENST00000305866 RBM6P78332 1123 aaKnown RBP6.57□□□□□ -1.36
VPS50-202ENST00000305866 CCDC144BQ3MJ40 725 aa6.57□□□□□ -1.36
VPS50-202ENST00000305866 CCDC93Q567U6 631 aa6.57□□□□□ -1.36
VPS50-202ENST00000305866 NBPF11Q86T75 865 aa6.57□□□□□ -1.36
VPS50-202ENST00000305866 CCDC144CPQ8IYA2 1237 aa6.57□□□□□ -1.36
VPS50-202ENST00000305866 UBE2HP62256 183 aa6.57□□□□□ -1.36
VPS50-202ENST00000305866 ME3Q16798 604 aa6.57□□□□□ -1.36
VPS50-202ENST00000305866 FAM184AQ8NB25 1140 aa6.57□□□□□ -1.36
VPS50-202ENST00000305866 LRRCC1Q9C099 1032 aa6.57□□□□□ -1.36
VPS50-202ENST00000305866 KIAA1551Q9HCM1 1747 aa6.57□□□□□ -1.36
VPS50-202ENST00000305866 RIOK3O14730 519 aaKnown RBP6.57□□□□□ -1.36
VPS50-202ENST00000305866 TPCN1Q9ULQ1 816 aa6.57□□□□□ -1.36
VPS50-202ENST00000305866 MORC2Q9Y6X9 1032 aaPredicted RBP6.57□□□□□ -1.36
VPS50-202ENST00000305866 FAM177BA6PVY3 158 aa6.56□□□□□ -1.36
VPS50-202ENST00000305866 HCLS1P14317 486 aaPredicted RBP6.56□□□□□ -1.36
VPS50-202ENST00000305866 SNW1Q13573 536 aaKnown RBP6.56□□□□□ -1.36
VPS50-202ENST00000305866 PDIA6Q15084 440 aa6.56□□□□□ -1.36
VPS50-202ENST00000305866 MTERF4Q7Z6M4 381 aaKnown RBP6.56□□□□□ -1.36
VPS50-202ENST00000305866 TDRD7Q8NHU6 1098 aaKnown RBP6.56□□□□□ -1.36
VPS50-202ENST00000305866 TRIM44Q96DX7 344 aaPredicted RBP6.56□□□□□ -1.36
VPS50-202ENST00000305866 TSPYL4Q9UJ04 414 aa6.56□□□□□ -1.36
VPS50-202ENST00000305866 CPA1P15085 419 aa6.56□□□□□ -1.36
VPS50-202ENST00000305866 LIG1P18858 919 aa6.56□□□□□ -1.36
VPS50-202ENST00000305866 MAP4K1Q92918 833 aa6.56□□□□□ -1.36
VPS50-202ENST00000305866 AGXT2Q9BYV1 514 aa6.56□□□□□ -1.36
VPS50-202ENST00000305866 PHLPP1O60346 1717 aa6.56□□□□□ -1.36
VPS50-202ENST00000305866 FOXP2O15409 715 aa6.56□□□□□ -1.36
VPS50-202ENST00000305866 NBPF7P0C2Y1 421 aaPredicted RBP6.56□□□□□ -1.36
VPS50-202ENST00000305866 CDC25BP30305 580 aa6.56□□□□□ -1.36
VPS50-202ENST00000305866 KIAA2012Q0VF49 1180 aa6.56□□□□□ -1.36
VPS50-202ENST00000305866 CASC1Q6TDU7 716 aa6.56□□□□□ -1.36
VPS50-202ENST00000305866 FBXL16Q8N461 479 aa6.56□□□□□ -1.36
VPS50-202ENST00000305866 ENGASEQ8NFI3 743 aa6.56□□□□□ -1.36
VPS50-202ENST00000305866 PHAXQ9H814 394 aaKnown RBP6.56□□□□□ -1.36
VPS50-202ENST00000305866 USP16Q9Y5T5 823 aa6.56□□□□□ -1.36
VPS50-202ENST00000305866 LRRFIP2Q9Y608 721 aaKnown RBP6.56□□□□□ -1.36
VPS50-202ENST00000305866 CCZ1BP86790 482 aa6.55□□□□□ -1.36
VPS50-202ENST00000305866 CCZ1P86791 482 aaPredicted RBP6.55□□□□□ -1.36
VPS50-202ENST00000305866 VPS53Q5VIR6 699 aa6.55□□□□□ -1.36
VPS50-202ENST00000305866 SARM1Q6SZW1 724 aa6.55□□□□□ -1.36
VPS50-202ENST00000305866 UPF3BQ9BZI7 483 aaKnown RBP6.55□□□□□ -1.36
VPS50-202ENST00000305866 NRBP1Q9UHY1 535 aa6.55□□□□□ -1.36
VPS50-202ENST00000305866 DDX41Q9UJV9 622 aaKnown RBP6.55□□□□□ -1.36
VPS50-202ENST00000305866 PHF8Q9UPP1 1060 aa6.55□□□□□ -1.36
VPS50-202ENST00000305866 WDR33Q9C0J8 1336 aaKnown RBP6.55□□□□□ -1.36
VPS50-202ENST00000305866 STRCQ7RTU9 1775 aa6.55□□□□□ -1.36
VPS50-202ENST00000305866 STX6O43752 255 aa6.55□□□□□ -1.36
VPS50-202ENST00000305866 NAA30Q147X3 362 aaPredicted RBP6.55□□□□□ -1.36
VPS50-202ENST00000305866 RNF214Q8ND24 703 aa6.55□□□□□ -1.36
VPS50-202ENST00000305866 CARMIL3Q8ND23 1372 aa6.55□□□□□ -1.36
VPS50-202ENST00000305866 ZNF609O15014 1411 aa6.55□□□□□ -1.36
VPS50-202ENST00000305866 USP27XA6NNY8 438 aa6.55□□□□□ -1.36
VPS50-202ENST00000305866 TULP2O00295 520 aa6.55□□□□□ -1.36
VPS50-202ENST00000305866 DTNBO60941 627 aa6.55□□□□□ -1.36
VPS50-202ENST00000305866 SASH1O94885 1247 aa6.55□□□□□ -1.36
VPS50-202ENST00000305866 CTDNEP1O95476 244 aa6.55□□□□□ -1.36
VPS50-202ENST00000305866 MSNP26038 577 aaKnown RBP6.55□□□□□ -1.36
VPS50-202ENST00000305866 FAM13BQ9NYF5 915 aa6.55□□□□□ -1.36
VPS50-202ENST00000305866 DNM1Q05193 864 aaKnown RBP6.54□□□□□ -1.36
VPS50-202ENST00000305866 RESTQ13127 1097 aa6.54□□□□□ -1.36
VPS50-202ENST00000305866 RABL6Q3YEC7 729 aaPredicted RBP6.54□□□□□ -1.36
VPS50-202ENST00000305866 HSP90AB4PQ58FF6 505 aa6.54□□□□□ -1.36
VPS50-202ENST00000305866 DHX40Q8IX18 779 aaKnown RBP6.54□□□□□ -1.36
VPS50-202ENST00000305866 COL4A1P02462 1669 aa6.54□□□□□ -1.36
VPS50-202ENST00000305866 SLIT2O94813 1529 aa6.54□□□□□ -1.36
VPS50-202ENST00000305866 RNMTO43148 476 aaKnown RBP6.54□□□□□ -1.36
VPS50-202ENST00000305866 RFX5P48382 616 aaPredicted RBP6.54□□□□□ -1.36
VPS50-202ENST00000305866 CDC37L1Q7L3B6 337 aa6.54□□□□□ -1.36
VPS50-202ENST00000305866 SMARCC2Q8TAQ2 1214 aa6.54□□□□□ -1.36
VPS50-202ENST00000305866 RHPN1Q8TCX5 695 aa6.54□□□□□ -1.36
VPS50-202ENST00000305866 RTF1Q92541 710 aaKnown RBP6.54□□□□□ -1.36
VPS50-202ENST00000305866 GTPBP4Q9BZE4 634 aaKnown RBP6.54□□□□□ -1.36
VPS50-202ENST00000305866 ESF1Q9H501 851 aaKnown RBP6.54□□□□□ -1.36
VPS50-202ENST00000305866 MYH1P12882 1939 aa6.54□□□□□ -1.36
VPS50-202ENST00000305866 ROBO1Q9Y6N7 1651 aa6.54□□□□□ -1.36
VPS50-202ENST00000305866 NBPF6Q5VWK0 638 aa6.54□□□□□ -1.36
VPS50-202ENST00000305866 GIMAP6Q6P9H5 292 aa6.54□□□□□ -1.36
VPS50-202ENST00000305866 LRRN4CLQ8ND94 238 aa6.54□□□□□ -1.36
VPS50-202ENST00000305866 KIF1BPQ96EK5 621 aa6.54□□□□□ -1.36
VPS50-202ENST00000305866 NBPF4Q96M43 638 aa6.54□□□□□ -1.36
VPS50-202ENST00000305866 TMEM51Q9NW97 253 aa6.54□□□□□ -1.36
VPS50-202ENST00000305866 MEGF6O75095 1541 aa6.53□□□□□ -1.36
VPS50-202ENST00000305866 ITGB4P16144 1822 aa6.53□□□□□ -1.36
VPS50-202ENST00000305866 TNS3Q68CZ2 1445 aa6.53□□□□□ -1.36
VPS50-202ENST00000305866 MYH6P13533 1939 aa6.53□□□□□ -1.36
VPS50-202ENST00000305866 GOLGA6L22H0YM25 854 aa6.53□□□□□ -1.36
VPS50-202ENST00000305866 LRMPQ12912 555 aa6.53□□□□□ -1.36
VPS50-202ENST00000305866 LIMCH1Q9UPQ0 1083 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms