RNA–Protein interactions for RNA: ENST00000303553.5

NDUFA3-201, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2 BASIC

Gene NDUFA3, Length 379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-201ENST00000303553 SRGNP10124 158 aa21.68■■□□□ 1.06
NDUFA3-201ENST00000303553 NLRP10Q86W26 655 aa21.68■■□□□ 1.06
NDUFA3-201ENST00000303553 NUTM1Q86Y26 1132 aa21.68■■□□□ 1.06
NDUFA3-201ENST00000303553 CACNA1SQ13698 1873 aa21.68■■□□□ 1.06
NDUFA3-201ENST00000303553 ABCC12Q96J65 1359 aa21.67■■□□□ 1.06
NDUFA3-201ENST00000303553 KLRG2A4D1S0 409 aaPredicted RBP21.67■■□□□ 1.06
NDUFA3-201ENST00000303553 NPR1P16066 1061 aa21.67■■□□□ 1.06
NDUFA3-201ENST00000303553 ERFEQ4G0M1 354 aa21.67■■□□□ 1.06
NDUFA3-201ENST00000303553 SLFN5Q08AF3 891 aa21.66■■□□□ 1.06
NDUFA3-201ENST00000303553 ISCA1Q9BUE6 129 aa21.66■■□□□ 1.06
NDUFA3-201ENST00000303553 SH3TC1Q8TE82 1336 aa21.65■■□□□ 1.06
NDUFA3-201ENST00000303553 TRMT112Q9UI30 125 aaKnown RBP21.65■■□□□ 1.06
NDUFA3-201ENST00000303553 TCERG1O14776 1098 aaKnown RBP21.64■■□□□ 1.05
NDUFA3-201ENST00000303553 NEXNQ0ZGT2 675 aa21.64■■□□□ 1.05
NDUFA3-201ENST00000303553 TRIM28Q13263 835 aaKnown RBP21.64■■□□□ 1.05
NDUFA3-201ENST00000303553 KSR2Q6VAB6 950 aa21.64■■□□□ 1.05
NDUFA3-201ENST00000303553 ARHGAP27Q6ZUM4 889 aa21.64■■□□□ 1.05
NDUFA3-201ENST00000303553 ALDH1B1P30837 517 aa21.63■■□□□ 1.05
NDUFA3-201ENST00000303553 FLIIQ13045 1269 aa21.63■■□□□ 1.05
NDUFA3-201ENST00000303553 CRY2Q49AN0 593 aa21.63■■□□□ 1.05
NDUFA3-201ENST00000303553 SOGA3Q5TF21 947 aa21.63■■□□□ 1.05
NDUFA3-201ENST00000303553 RPGRQ92834 1020 aaKnown RBP21.63■■□□□ 1.05
NDUFA3-201ENST00000303553 ZNF428Q96B54 188 aa21.63■■□□□ 1.05
NDUFA3-201ENST00000303553 NLRP3Q96P20 1036 aa21.63■■□□□ 1.05
NDUFA3-201ENST00000303553 METTL22Q9BUU2 404 aaPredicted RBP21.63■■□□□ 1.05
NDUFA3-201ENST00000303553 LAMB2P55268 1798 aa21.63■■□□□ 1.05
NDUFA3-201ENST00000303553 PI4KAP2A4QPH2 592 aa21.62■■□□□ 1.05
NDUFA3-201ENST00000303553 ATP5J2-PTCD1G3V325 749 aa21.62■■□□□ 1.05
NDUFA3-201ENST00000303553 HSP90B1P14625 803 aaKnown RBP21.62■■□□□ 1.05
NDUFA3-201ENST00000303553 SLC10A5Q5PT55 438 aa21.62■■□□□ 1.05
NDUFA3-201ENST00000303553 PI4KAP1Q8N8J0 262 aa21.62■■□□□ 1.05
NDUFA3-201ENST00000303553 MYD88Q99836 296 aa21.62■■□□□ 1.05
NDUFA3-201ENST00000303553 MAP3K2Q9Y2U5 619 aa21.62■■□□□ 1.05
NDUFA3-201ENST00000303553 FKBP5Q13451 457 aaPredicted RBP21.61■■□□□ 1.05
NDUFA3-201ENST00000303553 PRPF40BQ6NWY9 871 aaKnown RBP21.61■■□□□ 1.05
NDUFA3-201ENST00000303553 CCDC191Q8NCU4 936 aa21.61■■□□□ 1.05
NDUFA3-201ENST00000303553 ADCY9O60503 1353 aa21.61■■□□□ 1.05
NDUFA3-201ENST00000303553 SLX4Q8IY92 1834 aa21.6■■□□□ 1.05
NDUFA3-201ENST00000303553 DDX60Q8IY21 1712 aaKnown RBP21.6■■□□□ 1.05
NDUFA3-201ENST00000303553 CT47B1P0C2W7 299 aaPredicted RBP21.59■■□□□ 1.05
NDUFA3-201ENST00000303553 HNRNPUQ00839 825 aaKnown RBP eCLIP21.59■■□□□ 1.05
NDUFA3-201ENST00000303553 G2E3Q7L622 706 aa21.59■■□□□ 1.05
NDUFA3-201ENST00000303553 RBM17Q96I25 401 aaKnown RBP21.59■■□□□ 1.05
NDUFA3-201ENST00000303553 CWC25Q9NXE8 425 aaPredicted RBP21.59■■□□□ 1.05
NDUFA3-201ENST00000303553 HOXA10P31260 410 aaPredicted RBP21.58■■□□□ 1.05
NDUFA3-201ENST00000303553 ZBTB38Q8NAP3 1195 aaPredicted RBP21.58■■□□□ 1.05
NDUFA3-201ENST00000303553 CDCA7LQ96GN5 454 aa21.58■■□□□ 1.05
NDUFA3-201ENST00000303553 FER1L6Q2WGJ9 1857 aa21.58■■□□□ 1.04
NDUFA3-201ENST00000303553 C21orf2O43822 256 aa21.57■■□□□ 1.04
NDUFA3-201ENST00000303553 TRMT2AQ8IZ69 625 aaKnown RBP21.57■■□□□ 1.04
NDUFA3-201ENST00000303553 DNAAF4Q8WXU2 420 aa21.56■■□□□ 1.04
NDUFA3-201ENST00000303553 FAM89AQ96GI7 184 aa21.56■■□□□ 1.04
NDUFA3-201ENST00000303553 CRAMP1Q96RY5 1269 aa21.56■■□□□ 1.04
NDUFA3-201ENST00000303553 SBF1O95248 1867 aa21.56■■□□□ 1.04
NDUFA3-201ENST00000303553 PCCAP05165 728 aaPredicted RBP21.55■■□□□ 1.04
NDUFA3-201ENST00000303553 HCLS1P14317 486 aaPredicted RBP21.55■■□□□ 1.04
NDUFA3-201ENST00000303553 CCDC93Q567U6 631 aa21.54■■□□□ 1.04
NDUFA3-201ENST00000303553 IRS4O14654 1257 aaPredicted RBP21.53■■□□□ 1.04
NDUFA3-201ENST00000303553 ALDH1L2Q3SY69 923 aa21.53■■□□□ 1.04
NDUFA3-201ENST00000303553 GRIPAP1Q4V328 841 aa21.53■■□□□ 1.04
NDUFA3-201ENST00000303553 CC2D2BQ6DHV5 1058 aa21.53■■□□□ 1.04
NDUFA3-201ENST00000303553 LINS1Q8NG48 757 aa21.53■■□□□ 1.04
NDUFA3-201ENST00000303553 TMX4Q9H1E5 349 aaPredicted RBP21.53■■□□□ 1.04
NDUFA3-201ENST00000303553 ZNF219Q9P2Y4 722 aaPredicted RBP21.53■■□□□ 1.04
NDUFA3-201ENST00000303553 LTBP3Q9NS15 1303 aa21.53■■□□□ 1.04
NDUFA3-201ENST00000303553 NEURL1BA8MQ27 555 aa21.52■■□□□ 1.04
NDUFA3-201ENST00000303553 IGKV5-2P06315 115 aa21.52■■□□□ 1.04
NDUFA3-201ENST00000303553 LMNB1P20700 586 aa21.52■■□□□ 1.04
NDUFA3-201ENST00000303553 C3orf67Q6ZVT6 689 aa21.52■■□□□ 1.04
NDUFA3-201ENST00000303553 DDX46Q7L014 1031 aaKnown RBP21.52■■□□□ 1.04
NDUFA3-201ENST00000303553 RTKN2Q8IZC4 609 aa21.52■■□□□ 1.04
NDUFA3-201ENST00000303553 SYNE4Q8N205 404 aa21.52■■□□□ 1.04
NDUFA3-201ENST00000303553 TAOK3Q9H2K8 898 aa21.52■■□□□ 1.04
NDUFA3-201ENST00000303553 PTPRCP08575 1304 aa21.52■■□□□ 1.03
NDUFA3-201ENST00000303553 CDHR2Q9BYE9 1310 aa21.52■■□□□ 1.03
NDUFA3-201ENST00000303553 MYH3P11055 1940 aa21.51■■□□□ 1.03
NDUFA3-201ENST00000303553 CWF19L2Q2TBE0 894 aaKnown RBP21.51■■□□□ 1.03
NDUFA3-201ENST00000303553 RTL5Q5HYW3 569 aaPredicted RBP21.51■■□□□ 1.03
NDUFA3-201ENST00000303553 C9orf131Q5VYM1 1079 aa21.51■■□□□ 1.03
NDUFA3-201ENST00000303553 ZNF784Q8NCA9 323 aaPredicted RBP21.51■■□□□ 1.03
NDUFA3-201ENST00000303553 C7orf43Q8WVR3 580 aa21.51■■□□□ 1.03
NDUFA3-201ENST00000303553 RNF181Q9P0P0 153 aa21.51■■□□□ 1.03
NDUFA3-201ENST00000303553 CCDC88AQ3V6T2 1871 aa21.51■■□□□ 1.03
NDUFA3-201ENST00000303553 ZBED9Q6R2W3 1325 aa21.51■■□□□ 1.03
NDUFA3-201ENST00000303553 ZC3H4Q9UPT8 1303 aaKnown RBP21.51■■□□□ 1.03
NDUFA3-201ENST00000303553 TIAM2Q8IVF5 1701 aa21.5■■□□□ 1.03
NDUFA3-201ENST00000303553 PPEF1O14829 653 aaPredicted RBP21.5■■□□□ 1.03
NDUFA3-201ENST00000303553 RASSF7Q02833 373 aa21.5■■□□□ 1.03
NDUFA3-201ENST00000303553 SF3B3Q15393 1217 aaKnown RBP21.5■■□□□ 1.03
NDUFA3-201ENST00000303553 ABCC4O15439 1325 aa21.5■■□□□ 1.03
NDUFA3-201ENST00000303553 DICER1Q9UPY3 1922 aaKnown RBP21.49■■□□□ 1.03
NDUFA3-201ENST00000303553 NFKBIEO00221 500 aa21.49■■□□□ 1.03
NDUFA3-201ENST00000303553 PDE8AO60658 829 aa21.49■■□□□ 1.03
NDUFA3-201ENST00000303553 TMC4Q7Z404 712 aa21.49■■□□□ 1.03
NDUFA3-201ENST00000303553 MRPL50Q8N5N7 158 aaKnown RBP21.49■■□□□ 1.03
NDUFA3-201ENST00000303553 SSH1Q8WYL5 1049 aa21.49■■□□□ 1.03
NDUFA3-201ENST00000303553 SMC4Q9NTJ3 1288 aa21.49■■□□□ 1.03
NDUFA3-201ENST00000303553 BBOX1O75936 387 aa21.48■■□□□ 1.03
NDUFA3-201ENST00000303553 GRAPQ13588 217 aa21.48■■□□□ 1.03
NDUFA3-201ENST00000303553 GCKRQ14397 625 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms