RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 DDX46Q7L014 1031 aaKnown RBP14.19□□□□□ -0.14
ABCA3-201ENST00000301732 KRT222Q8N1A0 295 aa14.19□□□□□ -0.14
ABCA3-201ENST00000301732 ALS2CR12Q96Q35 445 aa14.19□□□□□ -0.14
ABCA3-201ENST00000301732 RRAGBQ5VZM2 374 aa14.19□□□□□ -0.14
ABCA3-201ENST00000301732 WDR97A6NE52 1622 aa14.19□□□□□ -0.14
ABCA3-201ENST00000301732 CETN2P41208 172 aa14.19□□□□□ -0.14
ABCA3-201ENST00000301732 TRIM27P14373 513 aa14.19□□□□□ -0.14
ABCA3-201ENST00000301732 TMEM67Q5HYA8 995 aa14.19□□□□□ -0.14
ABCA3-201ENST00000301732 CFAP58Q5T655 872 aa14.19□□□□□ -0.14
ABCA3-201ENST00000301732 ZNF444Q8N0Y2 327 aaPredicted RBP14.19□□□□□ -0.14
ABCA3-201ENST00000301732 CTCFLQ8NI51 663 aaPredicted RBP14.19□□□□□ -0.14
ABCA3-201ENST00000301732 ORC3Q9UBD5 711 aaPredicted RBP14.19□□□□□ -0.14
ABCA3-201ENST00000301732 DESP17661 470 aa14.18□□□□□ -0.14
ABCA3-201ENST00000301732 MSL1Q68DK7 614 aa14.18□□□□□ -0.14
ABCA3-201ENST00000301732 SYT10Q6XYQ8 523 aa14.18□□□□□ -0.14
ABCA3-201ENST00000301732 PTPRGP23470 1445 aa14.18□□□□□ -0.14
ABCA3-201ENST00000301732 LONRF3Q496Y0 759 aa14.18□□□□□ -0.14
ABCA3-201ENST00000301732 VPS36Q86VN1 386 aa14.18□□□□□ -0.14
ABCA3-201ENST00000301732 FERMT2Q96AC1 680 aa14.18□□□□□ -0.14
ABCA3-201ENST00000301732 PPP1R9BQ96SB3 815 aa14.18□□□□□ -0.14
ABCA3-201ENST00000301732 DDX23Q9BUQ8 820 aaKnown RBP14.18□□□□□ -0.14
ABCA3-201ENST00000301732 TSC1Q92574 1164 aa14.18□□□□□ -0.14
ABCA3-201ENST00000301732 EMILIN1Q9Y6C2 1016 aa14.18□□□□□ -0.14
ABCA3-201ENST00000301732 GNAT3A8MTJ3 354 aa14.18□□□□□ -0.14
ABCA3-201ENST00000301732 AKR1B10O60218 316 aa14.18□□□□□ -0.14
ABCA3-201ENST00000301732 GLRX3O76003 335 aaKnown RBP14.18□□□□□ -0.14
ABCA3-201ENST00000301732 HSPA4P34932 840 aa14.18□□□□□ -0.14
ABCA3-201ENST00000301732 GUCA1BQ9UMX6 200 aa14.17□□□□□ -0.14
ABCA3-201ENST00000301732 F8W031 263 aaPredicted RBP14.17□□□□□ -0.14
ABCA3-201ENST00000301732 TMX3Q96JJ7 454 aa14.17□□□□□ -0.14
ABCA3-201ENST00000301732 ERCC5P28715 1186 aaPredicted RBP14.17□□□□□ -0.14
ABCA3-201ENST00000301732 JAG2Q9Y219 1238 aa14.17□□□□□ -0.14
ABCA3-201ENST00000301732 FGD6Q6ZV73 1430 aa14.17□□□□□ -0.14
ABCA3-201ENST00000301732 DYNC1I1O14576 645 aa14.17□□□□□ -0.14
ABCA3-201ENST00000301732 DACT1Q9NYF0 836 aa14.17□□□□□ -0.14
ABCA3-201ENST00000301732 ANKRD50Q9ULJ7 1429 aa14.17□□□□□ -0.14
ABCA3-201ENST00000301732 OTUD6BQ8N6M0 293 aa14.16□□□□□ -0.14
ABCA3-201ENST00000301732 BRF1Q92994 677 aa14.16□□□□□ -0.14
ABCA3-201ENST00000301732 NSD3Q9BZ95 1437 aa14.16□□□□□ -0.14
ABCA3-201ENST00000301732 RPAP2Q8IXW5 612 aaPredicted RBP14.16□□□□□ -0.14
ABCA3-201ENST00000301732 KIF2AO00139 706 aaPredicted RBP14.16□□□□□ -0.14
ABCA3-201ENST00000301732 NFE2L2Q16236 605 aa14.16□□□□□ -0.14
ABCA3-201ENST00000301732 FAM212AQ96EL1 285 aa14.16□□□□□ -0.14
ABCA3-201ENST00000301732 KIF4AO95239 1232 aa14.16□□□□□ -0.14
ABCA3-201ENST00000301732 FGFR1OPO95684 399 aaKnown RBP14.16□□□□□ -0.14
ABCA3-201ENST00000301732 SPECC1LQ69YQ0 1117 aa14.16□□□□□ -0.14
ABCA3-201ENST00000301732 SYT1P21579 422 aa14.16□□□□□ -0.14
ABCA3-201ENST00000301732 TTLL12Q14166 644 aaPredicted RBP14.16□□□□□ -0.14
ABCA3-201ENST00000301732 PAXIP1Q6ZW49 1069 aaPredicted RBP14.16□□□□□ -0.14
ABCA3-201ENST00000301732 NME9Q86XW9 330 aa14.16□□□□□ -0.14
ABCA3-201ENST00000301732 KCNK9Q9NPC2 374 aa14.16□□□□□ -0.14
ABCA3-201ENST00000301732 KIAA0753Q2KHM9 967 aa14.15□□□□□ -0.14
ABCA3-201ENST00000301732 KRBA2Q6ZNG9 492 aa14.15□□□□□ -0.14
ABCA3-201ENST00000301732 ZGPATQ8N5A5 531 aaKnown RBP14.15□□□□□ -0.14
ABCA3-201ENST00000301732 CADPSQ9ULU8 1353 aa14.15□□□□□ -0.14
ABCA3-201ENST00000301732 HPDP32754 393 aaPredicted RBP14.15□□□□□ -0.14
ABCA3-201ENST00000301732 LRSAM1Q6UWE0 723 aa14.15□□□□□ -0.14
ABCA3-201ENST00000301732 BICD1Q96G01 975 aa14.15□□□□□ -0.14
ABCA3-201ENST00000301732 PRDM11Q9NQV5 511 aa14.15□□□□□ -0.14
ABCA3-201ENST00000301732 MRVI1Q9Y6F6 885 aa14.15□□□□□ -0.14
ABCA3-201ENST00000301732 CPA1P15085 419 aa14.15□□□□□ -0.14
ABCA3-201ENST00000301732 ARFGAP3Q9NP61 516 aa14.15□□□□□ -0.14
ABCA3-201ENST00000301732 ARID4AP29374 1257 aaPredicted RBP14.15□□□□□ -0.14
ABCA3-201ENST00000301732 MAP3K2Q9Y2U5 619 aa14.15□□□□□ -0.14
ABCA3-201ENST00000301732 METAP2P50579 478 aaKnown RBP eCLIP14.15□□□□□ -0.14
ABCA3-201ENST00000301732 DHX58Q96C10 678 aa14.15□□□□□ -0.14
ABCA3-201ENST00000301732 GSTA5Q7RTV2 222 aa14.15□□□□□ -0.15
ABCA3-201ENST00000301732 IARSP41252 1262 aaKnown RBP14.14□□□□□ -0.15
ABCA3-201ENST00000301732 SYKP43405 635 aa14.14□□□□□ -0.15
ABCA3-201ENST00000301732 TRMT112Q9UI30 125 aaKnown RBP14.14□□□□□ -0.15
ABCA3-201ENST00000301732 IKBKGQ9Y6K9 419 aa14.14□□□□□ -0.15
ABCA3-201ENST00000301732 A0A087WZG4 1122 aa14.14□□□□□ -0.15
ABCA3-201ENST00000301732 ZBTB16Q05516 673 aa14.14□□□□□ -0.15
ABCA3-201ENST00000301732 GRM1Q13255 1194 aa14.14□□□□□ -0.15
ABCA3-201ENST00000301732 NAA15Q9BXJ9 866 aaKnown RBP14.14□□□□□ -0.15
ABCA3-201ENST00000301732 GRIPAP1Q4V328 841 aa14.14□□□□□ -0.15
ABCA3-201ENST00000301732 ZNF569Q5MCW4 686 aa14.14□□□□□ -0.15
ABCA3-201ENST00000301732 GIGYF2Q6Y7W6 1299 aaKnown RBP14.14□□□□□ -0.15
ABCA3-201ENST00000301732 ZBTB21Q9ULJ3 1066 aa14.14□□□□□ -0.15
ABCA3-201ENST00000301732 TOP2AP11388 1531 aaKnown RBP14.14□□□□□ -0.15
ABCA3-201ENST00000301732 IRX3P78415 501 aaPredicted RBP14.13□□□□□ -0.15
ABCA3-201ENST00000301732 CAVIN4Q5BKX8 364 aa14.13□□□□□ -0.15
ABCA3-201ENST00000301732 HINFPQ9BQA5 517 aa14.13□□□□□ -0.15
ABCA3-201ENST00000301732 TSPY2A6NKD2 308 aa14.13□□□□□ -0.15
ABCA3-201ENST00000301732 EEF2P13639 858 aaKnown RBP14.13□□□□□ -0.15
ABCA3-201ENST00000301732 TMEM266Q2M3C6 531 aa14.13□□□□□ -0.15
ABCA3-201ENST00000301732 UBA7P41226 1012 aa14.13□□□□□ -0.15
ABCA3-201ENST00000301732 UAP1Q16222 522 aaPredicted RBP14.13□□□□□ -0.15
ABCA3-201ENST00000301732 KLF18A0A0U1RQI7 1052 aa14.13□□□□□ -0.15
ABCA3-201ENST00000301732 CTAGE15A4D2H0 777 aa14.13□□□□□ -0.15
ABCA3-201ENST00000301732 CTAGE8P0CG41 777 aa14.13□□□□□ -0.15
ABCA3-201ENST00000301732 MCM3P25205 808 aa14.13□□□□□ -0.15
ABCA3-201ENST00000301732 CTAGE6Q86UF2 777 aa14.13□□□□□ -0.15
ABCA3-201ENST00000301732 IQCA1Q86XH1 822 aa14.13□□□□□ -0.15
ABCA3-201ENST00000301732 CCDC50Q8IVM0 306 aa14.13□□□□□ -0.15
ABCA3-201ENST00000301732 CTAGE4Q8IX94 777 aa14.13□□□□□ -0.15
ABCA3-201ENST00000301732 GDAP1L1Q96MZ0 367 aa14.13□□□□□ -0.15
ABCA3-201ENST00000301732 PSMB7Q99436 277 aa14.13□□□□□ -0.15
ABCA3-201ENST00000301732 STX8Q9UNK0 236 aa14.13□□□□□ -0.15
ABCA3-201ENST00000301732 ERBINQ96RT1 1412 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms