RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 ADCK5Q3MIX3 580 aa22.78■■□□□ 1.24
TRA2A-201ENST00000297071 LARP1BQ659C4 914 aaKnown RBP22.78■■□□□ 1.24
TRA2A-201ENST00000297071 CREB3L3Q68CJ9 461 aa22.78■■□□□ 1.24
TRA2A-201ENST00000297071 HMG20BQ9P0W2 317 aa22.78■■□□□ 1.24
TRA2A-201ENST00000297071 PYCARDQ9ULZ3 195 aa22.78■■□□□ 1.24
TRA2A-201ENST00000297071 MRVI1Q9Y6F6 885 aa22.78■■□□□ 1.24
TRA2A-201ENST00000297071 UTYO14607 1347 aa22.77■■□□□ 1.24
TRA2A-201ENST00000297071 LTKP29376 864 aa22.77■■□□□ 1.24
TRA2A-201ENST00000297071 TYRO3Q06418 890 aa22.77■■□□□ 1.24
TRA2A-201ENST00000297071 RNF20Q5VTR2 975 aa22.77■■□□□ 1.24
TRA2A-201ENST00000297071 TDRD7Q8NHU6 1098 aaKnown RBP22.77■■□□□ 1.24
TRA2A-201ENST00000297071 SOX12O15370 315 aa22.76■■□□□ 1.23
TRA2A-201ENST00000297071 CDC25BP30305 580 aa22.76■■□□□ 1.23
TRA2A-201ENST00000297071 RBM8AQ9Y5S9 174 aaKnown RBP22.76■■□□□ 1.23
TRA2A-201ENST00000297071 ADAMTS7Q9UKP4 1686 aa22.76■■□□□ 1.23
TRA2A-201ENST00000297071 PI4KAP2A4QPH2 592 aa22.75■■□□□ 1.23
TRA2A-201ENST00000297071 ZSCAN20P17040 1043 aaPredicted RBP22.75■■□□□ 1.23
TRA2A-201ENST00000297071 NLRP6P59044 892 aa22.75■■□□□ 1.23
TRA2A-201ENST00000297071 PI4KAP1Q8N8J0 262 aa22.75■■□□□ 1.23
TRA2A-201ENST00000297071 FEZ1Q99689 392 aa22.75■■□□□ 1.23
TRA2A-201ENST00000297071 IFIT2P09913 472 aaKnown RBP22.75■■□□□ 1.23
TRA2A-201ENST00000297071 CLSTN2Q9H4D0 955 aa22.75■■□□□ 1.23
TRA2A-201ENST00000297071 TPCN1Q9ULQ1 816 aa22.75■■□□□ 1.23
TRA2A-201ENST00000297071 AMOTL2Q9Y2J4 779 aa22.75■■□□□ 1.23
TRA2A-201ENST00000297071 RFX7Q2KHR2 1363 aa22.75■■□□□ 1.23
TRA2A-201ENST00000297071 NFAT5O94916 1531 aa22.74■■□□□ 1.23
TRA2A-201ENST00000297071 NPHP4O75161 1426 aaPredicted RBP22.74■■□□□ 1.23
TRA2A-201ENST00000297071 VPS37CA5D8V6 355 aaPredicted RBP22.74■■□□□ 1.23
TRA2A-201ENST00000297071 RIOK3O14730 519 aaKnown RBP22.74■■□□□ 1.23
TRA2A-201ENST00000297071 OS9Q13438 667 aaPredicted RBP22.74■■□□□ 1.23
TRA2A-201ENST00000297071 PLA2G4DQ86XP0 818 aa22.74■■□□□ 1.23
TRA2A-201ENST00000297071 DBF4Q9UBU7 674 aaPredicted RBP22.74■■□□□ 1.23
TRA2A-201ENST00000297071 HEG1Q9ULI3 1381 aa22.74■■□□□ 1.23
TRA2A-201ENST00000297071 MED23Q9ULK4 1368 aa22.74■■□□□ 1.23
TRA2A-201ENST00000297071 PDCL2Q8N4E4 241 aa22.73■■□□□ 1.23
TRA2A-201ENST00000297071 CHPF2Q9P2E5 772 aa22.73■■□□□ 1.23
TRA2A-201ENST00000297071 EID1Q9Y6B2 187 aa22.73■■□□□ 1.23
TRA2A-201ENST00000297071 SLC27A2O14975 620 aa22.73■■□□□ 1.23
TRA2A-201ENST00000297071 CPA1P15085 419 aa22.73■■□□□ 1.23
TRA2A-201ENST00000297071 C17orf53Q8N3J3 647 aaPredicted RBP22.73■■□□□ 1.23
TRA2A-201ENST00000297071 CAMTA1Q9Y6Y1 1673 aa22.72■■□□□ 1.23
TRA2A-201ENST00000297071 NUTM2FA1L443 756 aa22.72■■□□□ 1.23
TRA2A-201ENST00000297071 SMTNL1A8MU46 457 aa22.72■■□□□ 1.23
TRA2A-201ENST00000297071 BLOC1S2Q6QNY1 142 aa22.72■■□□□ 1.23
TRA2A-201ENST00000297071 TNMDQ9H2S6 317 aa22.72■■□□□ 1.23
TRA2A-201ENST00000297071 RPS6KB1P23443 525 aa22.71■■□□□ 1.23
TRA2A-201ENST00000297071 PAXBP1Q9Y5B6 917 aa22.71■■□□□ 1.23
TRA2A-201ENST00000297071 RGPD2P0DJD1 1756 aa22.71■■□□□ 1.23
TRA2A-201ENST00000297071 NEMFO60524 1076 aa22.71■■□□□ 1.23
TRA2A-201ENST00000297071 KIF20AO95235 890 aa22.71■■□□□ 1.23
TRA2A-201ENST00000297071 LIG1P18858 919 aa22.71■■□□□ 1.23
TRA2A-201ENST00000297071 KRT32Q14532 448 aa22.71■■□□□ 1.23
TRA2A-201ENST00000297071 KSR2Q6VAB6 950 aa22.71■■□□□ 1.23
TRA2A-201ENST00000297071 IP6K1Q92551 441 aa22.71■■□□□ 1.23
TRA2A-201ENST00000297071 CBX8Q9HC52 389 aa22.71■■□□□ 1.23
TRA2A-201ENST00000297071 ZNF75DP51815 510 aa22.7■■□□□ 1.22
TRA2A-201ENST00000297071 HSPA2P54652 639 aa22.7■■□□□ 1.22
TRA2A-201ENST00000297071 AKAP4Q5JQC9 854 aa22.7■■□□□ 1.22
TRA2A-201ENST00000297071 PPP4R3BQ5MIZ7 849 aa22.7■■□□□ 1.22
TRA2A-201ENST00000297071 SARM1Q6SZW1 724 aa22.7■■□□□ 1.22
TRA2A-201ENST00000297071 CDC37L1Q7L3B6 337 aa22.7■■□□□ 1.22
TRA2A-201ENST00000297071 LARP6Q9BRS8 491 aaKnown RBP22.7■■□□□ 1.22
TRA2A-201ENST00000297071 USPL1Q5W0Q7 1092 aa22.69■■□□□ 1.22
TRA2A-201ENST00000297071 MPNDQ8N594 471 aa22.69■■□□□ 1.22
TRA2A-201ENST00000297071 LEO1Q8WVC0 666 aaPredicted RBP22.69■■□□□ 1.22
TRA2A-201ENST00000297071 SPATA32Q96LK8 384 aa22.68■■□□□ 1.22
TRA2A-201ENST00000297071 GOLGA6L4A6NEF3 574 aa22.68■■□□□ 1.22
TRA2A-201ENST00000297071 EIF2S2P20042 333 aaKnown RBP22.68■■□□□ 1.22
TRA2A-201ENST00000297071 PTGS1P23219 599 aa22.68■■□□□ 1.22
TRA2A-201ENST00000297071 PLCB2Q00722 1185 aa22.68■■□□□ 1.22
TRA2A-201ENST00000297071 NMIQ13287 307 aaPredicted RBP22.68■■□□□ 1.22
TRA2A-201ENST00000297071 ZSCAN16Q9H4T2 348 aaPredicted RBP22.68■■□□□ 1.22
TRA2A-201ENST00000297071 LAMA4Q16363 1823 aa22.67■■□□□ 1.22
TRA2A-201ENST00000297071 TICAM2Q86XR7 235 aa22.67■■□□□ 1.22
TRA2A-201ENST00000297071 NECAB1Q8N987 351 aa22.67■■□□□ 1.22
TRA2A-201ENST00000297071 DACT1Q9NYF0 836 aa22.67■■□□□ 1.22
TRA2A-201ENST00000297071 C9orf78Q9NZ63 289 aaPredicted RBP22.67■■□□□ 1.22
TRA2A-201ENST00000297071 CTAGE5O15320 804 aa22.66■■□□□ 1.22
TRA2A-201ENST00000297071 KCNJ4P48050 445 aa22.66■■□□□ 1.22
TRA2A-201ENST00000297071 ANO6Q4KMQ2 910 aa22.66■■□□□ 1.22
TRA2A-201ENST00000297071 AACSQ86V21 672 aa22.66■■□□□ 1.22
TRA2A-201ENST00000297071 SPC24Q8NBT2 197 aa22.66■■□□□ 1.22
TRA2A-201ENST00000297071 LINS1Q8NG48 757 aa22.66■■□□□ 1.22
TRA2A-201ENST00000297071 TOB2Q14106 344 aaPredicted RBP22.66■■□□□ 1.22
TRA2A-201ENST00000297071 AMOTQ4VCS5 1084 aa22.65■■□□□ 1.22
TRA2A-201ENST00000297071 ATL3Q6DD88 541 aa22.65■■□□□ 1.22
TRA2A-201ENST00000297071 ZSCAN25Q6NSZ9 544 aa22.65■■□□□ 1.22
TRA2A-201ENST00000297071 CCDC186Q7Z3E2 898 aa22.65■■□□□ 1.22
TRA2A-201ENST00000297071 TSC1Q92574 1164 aa22.65■■□□□ 1.22
TRA2A-201ENST00000297071 KCND1Q9NSA2 647 aa22.65■■□□□ 1.22
TRA2A-201ENST00000297071 SASH1O94885 1247 aa22.64■■□□□ 1.22
TRA2A-201ENST00000297071 G3BP1Q13283 466 aaKnown RBP eCLIP22.64■■□□□ 1.22
TRA2A-201ENST00000297071 ATP2B3Q16720 1220 aa22.64■■□□□ 1.22
TRA2A-201ENST00000297071 LUZP1Q86V48 1076 aa22.64■■□□□ 1.22
TRA2A-201ENST00000297071 TEFQ10587 303 aa22.64■■□□□ 1.21
TRA2A-201ENST00000297071 JARID2Q92833 1246 aaPredicted RBP22.64■■□□□ 1.21
TRA2A-201ENST00000297071 MRFAP1L1Q96HT8 127 aa22.64■■□□□ 1.21
TRA2A-201ENST00000297071 LLPHQ9BRT6 129 aaKnown RBP22.64■■□□□ 1.21
TRA2A-201ENST00000297071 OGFRQ9NZT2 677 aa22.64■■□□□ 1.21
TRA2A-201ENST00000297071 CFAP45Q9UL16 551 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms