RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 MASTLQ96GX5 879 aa15.47■□□□□ 0.07
HMGB2-201ENST00000296503 CNKSR1Q969H4 720 aa15.46■□□□□ 0.07
HMGB2-201ENST00000296503 MYD88Q99836 296 aa15.46■□□□□ 0.07
HMGB2-201ENST00000296503 ZNF219Q9P2Y4 722 aaPredicted RBP15.46■□□□□ 0.07
HMGB2-201ENST00000296503 ANKRD31Q8N7Z5 1873 aa15.46■□□□□ 0.07
HMGB2-201ENST00000296503 PI4KAP2A4QPH2 592 aa15.46■□□□□ 0.06
HMGB2-201ENST00000296503 NPR1P16066 1061 aa15.46■□□□□ 0.06
HMGB2-201ENST00000296503 STYK1Q6J9G0 422 aa15.46■□□□□ 0.06
HMGB2-201ENST00000296503 KSR2Q6VAB6 950 aa15.46■□□□□ 0.06
HMGB2-201ENST00000296503 PI4KAP1Q8N8J0 262 aa15.46■□□□□ 0.06
HMGB2-201ENST00000296503 ISCA1Q9BUE6 129 aa15.46■□□□□ 0.06
HMGB2-201ENST00000296503 MAP3K2Q9Y2U5 619 aa15.46■□□□□ 0.06
HMGB2-201ENST00000296503 KLRG2A4D1S0 409 aaPredicted RBP15.45■□□□□ 0.06
HMGB2-201ENST00000296503 HNRNPUQ00839 825 aaKnown RBP eCLIP15.45■□□□□ 0.06
HMGB2-201ENST00000296503 NLRP3Q96P20 1036 aa15.45■□□□□ 0.06
HMGB2-201ENST00000296503 IBTKQ9P2D0 1353 aaPredicted RBP15.45■□□□□ 0.06
HMGB2-201ENST00000296503 GOLGB1Q14789 3259 aaKnown RBP15.45■□□□□ 0.06
HMGB2-201ENST00000296503 FLIIQ13045 1269 aa15.44■□□□□ 0.06
HMGB2-201ENST00000296503 METTL22Q9BUU2 404 aaPredicted RBP15.44■□□□□ 0.06
HMGB2-201ENST00000296503 CHD4Q14839 1912 aa15.44■□□□□ 0.06
HMGB2-201ENST00000296503 ALDH1B1P30837 517 aa15.44■□□□□ 0.06
HMGB2-201ENST00000296503 TRIM28Q13263 835 aaKnown RBP15.44■□□□□ 0.06
HMGB2-201ENST00000296503 FKBP5Q13451 457 aaPredicted RBP15.44■□□□□ 0.06
HMGB2-201ENST00000296503 SLC10A5Q5PT55 438 aa15.44■□□□□ 0.06
HMGB2-201ENST00000296503 SYNE4Q8N205 404 aa15.44■□□□□ 0.06
HMGB2-201ENST00000296503 RPGRQ92834 1020 aaKnown RBP15.44■□□□□ 0.06
HMGB2-201ENST00000296503 ABCC12Q96J65 1359 aa15.44■□□□□ 0.06
HMGB2-201ENST00000296503 UTRNP46939 3433 aa15.43■□□□□ 0.06
HMGB2-201ENST00000296503 BRCA1P38398 1863 aaKnown RBP15.43■□□□□ 0.06
HMGB2-201ENST00000296503 RNF123Q5XPI4 1314 aa15.43■□□□□ 0.06
HMGB2-201ENST00000296503 SH3TC1Q8TE82 1336 aa15.43■□□□□ 0.06
HMGB2-201ENST00000296503 C21orf2O43822 256 aa15.43■□□□□ 0.06
HMGB2-201ENST00000296503 HCLS1P14317 486 aaPredicted RBP15.43■□□□□ 0.06
HMGB2-201ENST00000296503 NEXNQ0ZGT2 675 aa15.43■□□□□ 0.06
HMGB2-201ENST00000296503 RTL5Q5HYW3 569 aaPredicted RBP15.43■□□□□ 0.06
HMGB2-201ENST00000296503 FAM89AQ96GI7 184 aa15.43■□□□□ 0.06
HMGB2-201ENST00000296503 PRPF40BQ6NWY9 871 aaKnown RBP15.42■□□□□ 0.06
HMGB2-201ENST00000296503 CCDC191Q8NCU4 936 aa15.42■□□□□ 0.06
HMGB2-201ENST00000296503 ANKRD36CQ5JPF3 1778 aa15.41■□□□□ 0.06
HMGB2-201ENST00000296503 CRY2Q49AN0 593 aa15.41■□□□□ 0.06
HMGB2-201ENST00000296503 TRMT2AQ8IZ69 625 aaKnown RBP15.41■□□□□ 0.06
HMGB2-201ENST00000296503 RBM17Q96I25 401 aaKnown RBP15.41■□□□□ 0.06
HMGB2-201ENST00000296503 CWC25Q9NXE8 425 aaPredicted RBP15.41■□□□□ 0.06
HMGB2-201ENST00000296503 C3orf67Q6ZVT6 689 aa15.4■□□□□ 0.06
HMGB2-201ENST00000296503 BCL11AQ9H165 835 aa15.4■□□□□ 0.06
HMGB2-201ENST00000296503 ARFGEF1Q9Y6D6 1849 aa15.4■□□□□ 0.06
HMGB2-201ENST00000296503 DLEC1Q9Y238 1755 aa15.4■□□□□ 0.06
HMGB2-201ENST00000296503 ARFGEF2Q9Y6D5 1785 aa15.4■□□□□ 0.06
HMGB2-201ENST00000296503 DNAAF4Q8WXU2 420 aa15.4■□□□□ 0.06
HMGB2-201ENST00000296503 ADCY9O60503 1353 aa15.39■□□□□ 0.05
HMGB2-201ENST00000296503 CACNA1FO60840 1977 aa15.39■□□□□ 0.05
HMGB2-201ENST00000296503 COL11A2P13942 1736 aaPredicted RBP15.39■□□□□ 0.05
HMGB2-201ENST00000296503 IRS4O14654 1257 aaPredicted RBP15.39■□□□□ 0.05
HMGB2-201ENST00000296503 ZBTB38Q8NAP3 1195 aaPredicted RBP15.39■□□□□ 0.05
HMGB2-201ENST00000296503 JARID2Q92833 1246 aaPredicted RBP15.39■□□□□ 0.05
HMGB2-201ENST00000296503 IGKV5-2P06315 115 aa15.38■□□□□ 0.05
HMGB2-201ENST00000296503 HOXA10P31260 410 aaPredicted RBP15.38■□□□□ 0.05
HMGB2-201ENST00000296503 SOGA3Q5TF21 947 aa15.38■□□□□ 0.05
HMGB2-201ENST00000296503 RIC1Q4ADV7 1423 aa15.38■□□□□ 0.05
HMGB2-201ENST00000296503 HSP90B1P14625 803 aaKnown RBP15.37■□□□□ 0.05
HMGB2-201ENST00000296503 RASSF7Q02833 373 aa15.37■□□□□ 0.05
HMGB2-201ENST00000296503 CWF19L2Q2TBE0 894 aaKnown RBP15.37■□□□□ 0.05
HMGB2-201ENST00000296503 C9orf131Q5VYM1 1079 aa15.37■□□□□ 0.05
HMGB2-201ENST00000296503 CRAMP1Q96RY5 1269 aa15.37■□□□□ 0.05
HMGB2-201ENST00000296503 SLX4Q8IY92 1834 aa15.37■□□□□ 0.05
HMGB2-201ENST00000296503 F6X3S4 739 aa15.37■□□□□ 0.05
HMGB2-201ENST00000296503 PCCAP05165 728 aaPredicted RBP15.37■□□□□ 0.05
HMGB2-201ENST00000296503 DDX46Q7L014 1031 aaKnown RBP15.37■□□□□ 0.05
HMGB2-201ENST00000296503 MRPL50Q8N5N7 158 aaKnown RBP15.37■□□□□ 0.05
HMGB2-201ENST00000296503 SSH1Q8WYL5 1049 aa15.37■□□□□ 0.05
HMGB2-201ENST00000296503 TNRC6CQ9HCJ0 1690 aaKnown RBP15.36■□□□□ 0.05
HMGB2-201ENST00000296503 NEURL1BA8MQ27 555 aa15.36■□□□□ 0.05
HMGB2-201ENST00000296503 ZNF784Q8NCA9 323 aaPredicted RBP15.36■□□□□ 0.05
HMGB2-201ENST00000296503 C7orf43Q8WVR3 580 aa15.36■□□□□ 0.05
HMGB2-201ENST00000296503 BCL2L13Q9BXK5 485 aa15.36■□□□□ 0.05
HMGB2-201ENST00000296503 TMX4Q9H1E5 349 aaPredicted RBP15.36■□□□□ 0.05
HMGB2-201ENST00000296503 RNF181Q9P0P0 153 aa15.36■□□□□ 0.05
HMGB2-201ENST00000296503 CACNA1SQ13698 1873 aa15.36■□□□□ 0.05
HMGB2-201ENST00000296503 CT47B1P0C2W7 299 aaPredicted RBP15.35■□□□□ 0.05
HMGB2-201ENST00000296503 CCDC93Q567U6 631 aa15.35■□□□□ 0.05
HMGB2-201ENST00000296503 OLFM4Q6UX06 510 aa15.35■□□□□ 0.05
HMGB2-201ENST00000296503 LINS1Q8NG48 757 aa15.35■□□□□ 0.05
HMGB2-201ENST00000296503 NFKBIEO00221 500 aa15.35■□□□□ 0.05
HMGB2-201ENST00000296503 LMNB1P20700 586 aa15.35■□□□□ 0.05
HMGB2-201ENST00000296503 ALDH1L2Q3SY69 923 aa15.35■□□□□ 0.05
HMGB2-201ENST00000296503 SLC4A10Q6U841 1118 aa15.35■□□□□ 0.05
HMGB2-201ENST00000296503 SF3B3Q15393 1217 aaKnown RBP15.34■□□□□ 0.05
HMGB2-201ENST00000296503 TAOK3Q9H2K8 898 aa15.34■□□□□ 0.05
HMGB2-201ENST00000296503 SMC4Q9NTJ3 1288 aa15.34■□□□□ 0.05
HMGB2-201ENST00000296503 PPEF1O14829 653 aaPredicted RBP15.33■□□□□ 0.05
HMGB2-201ENST00000296503 PDE8AO60658 829 aa15.33■□□□□ 0.05
HMGB2-201ENST00000296503 BBOX1O75936 387 aa15.33■□□□□ 0.05
HMGB2-201ENST00000296503 GCKRQ14397 625 aa15.33■□□□□ 0.05
HMGB2-201ENST00000296503 RTKN2Q8IZC4 609 aa15.33■□□□□ 0.05
HMGB2-201ENST00000296503 ABCC4O15439 1325 aa15.33■□□□□ 0.04
HMGB2-201ENST00000296503 CC2D2BQ6DHV5 1058 aa15.33■□□□□ 0.04
HMGB2-201ENST00000296503 ZNF526Q8TF50 670 aaPredicted RBP15.33■□□□□ 0.04
HMGB2-201ENST00000296503 H7C1W4 665 aa15.32■□□□□ 0.04
HMGB2-201ENST00000296503 GRAPQ13588 217 aa15.32■□□□□ 0.04
HMGB2-201ENST00000296503 BEND3Q5T5X7 828 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms