RNA–Protein interactions for RNA: ENST00000289495.7

PPP1R9A-201, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 3,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-201ENST00000289495 PRAMEF22A3QJZ6 481 aa5.83□□□□□ -1.48
PPP1R9A-201ENST00000289495 PHKG2P15735 406 aa5.83□□□□□ -1.48
PPP1R9A-201ENST00000289495 CABP4P57796 275 aa5.83□□□□□ -1.48
PPP1R9A-201ENST00000289495 CCDC173Q0VFZ6 552 aa5.83□□□□□ -1.48
PPP1R9A-201ENST00000289495 CUL4AQ13619 759 aa5.83□□□□□ -1.48
PPP1R9A-201ENST00000289495 SP7Q8TDD2 431 aaPredicted RBP5.83□□□□□ -1.48
PPP1R9A-201ENST00000289495 XAGE3Q8WTP9 111 aa5.83□□□□□ -1.48
PPP1R9A-201ENST00000289495 BICC1Q9H694 974 aaKnown RBP5.83□□□□□ -1.48
PPP1R9A-201ENST00000289495 TRPM3Q9HCF6 1732 aaPredicted RBP5.83□□□□□ -1.48
PPP1R9A-201ENST00000289495 PHF14O94880 888 aa5.82□□□□□ -1.48
PPP1R9A-201ENST00000289495 SNRPA1P09661 255 aaKnown RBP5.82□□□□□ -1.48
PPP1R9A-201ENST00000289495 CHRNA2Q15822 529 aa5.82□□□□□ -1.48
PPP1R9A-201ENST00000289495 RNF20Q5VTR2 975 aa5.82□□□□□ -1.48
PPP1R9A-201ENST00000289495 LMBRD1Q9NUN5 540 aa5.82□□□□□ -1.48
PPP1R9A-201ENST00000289495 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.82□□□□□ -1.482e-7■■■■□ 25.5
PPP1R9A-201ENST00000289495 USP42Q9H9J4 1324 aaKnown RBP5.82□□□□□ -1.48
PPP1R9A-201ENST00000289495 CAMTA1Q9Y6Y1 1673 aa5.82□□□□□ -1.48
PPP1R9A-201ENST00000289495 CASTP20810 708 aaKnown RBP5.82□□□□□ -1.48
PPP1R9A-201ENST00000289495 DCAF5Q96JK2 942 aa5.82□□□□□ -1.48
PPP1R9A-201ENST00000289495 JAKMIP1Q96N16 626 aaKnown RBP5.82□□□□□ -1.48
PPP1R9A-201ENST00000289495 ATP6V1DQ9Y5K8 247 aa5.82□□□□□ -1.48
PPP1R9A-201ENST00000289495 SNX14Q9Y5W7 946 aa5.82□□□□□ -1.48
PPP1R9A-201ENST00000289495 DCCP43146 1447 aa5.82□□□□□ -1.48
PPP1R9A-201ENST00000289495 TNS3Q68CZ2 1445 aa5.82□□□□□ -1.48
PPP1R9A-201ENST00000289495 LMTK3Q96Q04 1460 aa5.82□□□□□ -1.48
PPP1R9A-201ENST00000289495 ZSCAN23Q3MJ62 389 aa5.82□□□□□ -1.48
PPP1R9A-201ENST00000289495 FOXD4L6Q3SYB3 417 aaPredicted RBP5.82□□□□□ -1.48
PPP1R9A-201ENST00000289495 FOXD4L3Q6VB84 417 aaPredicted RBP5.82□□□□□ -1.48
PPP1R9A-201ENST00000289495 COPS6Q7L5N1 327 aa5.82□□□□□ -1.48
PPP1R9A-201ENST00000289495 NFATC2IPQ8NCF5 419 aa5.82□□□□□ -1.48
PPP1R9A-201ENST00000289495 CCDC8Q9H0W5 538 aaPredicted RBP5.82□□□□□ -1.48
PPP1R9A-201ENST00000289495 LIMCH1Q9UPQ0 1083 aa5.82□□□□□ -1.48
PPP1R9A-201ENST00000289495 CHMP3Q9Y3E7 222 aa5.82□□□□□ -1.48
PPP1R9A-201ENST00000289495 CYP46A1Q9Y6A2 500 aa5.82□□□□□ -1.48
PPP1R9A-201ENST00000289495 TUBGCP6Q96RT7 1819 aa5.82□□□□□ -1.48
PPP1R9A-201ENST00000289495 BRD1O95696 1058 aa5.82□□□□□ -1.48
PPP1R9A-201ENST00000289495 ZNF445P59923 1031 aa5.82□□□□□ -1.48
PPP1R9A-201ENST00000289495 CSPP1Q1MSJ5 1256 aa5.82□□□□□ -1.48
PPP1R9A-201ENST00000289495 PRPF40BQ6NWY9 871 aaKnown RBP5.82□□□□□ -1.48
PPP1R9A-201ENST00000289495 CABLES1Q8TDN4 633 aa5.82□□□□□ -1.48
PPP1R9A-201ENST00000289495 METTL22Q9BUU2 404 aaPredicted RBP5.82□□□□□ -1.48
PPP1R9A-201ENST00000289495 LSG1Q9H089 658 aaKnown RBP5.82□□□□□ -1.48
PPP1R9A-201ENST00000289495 MST1RQ04912 1400 aa5.81□□□□□ -1.48
PPP1R9A-201ENST00000289495 PSMA5P28066 241 aa5.81□□□□□ -1.48
PPP1R9A-201ENST00000289495 ANKRD13DQ6ZTN6 518 aa5.81□□□□□ -1.48
PPP1R9A-201ENST00000289495 GAS2L3Q86XJ1 694 aa5.81□□□□□ -1.48
PPP1R9A-201ENST00000289495 DDX17Q92841 729 aaKnown RBP5.81□□□□□ -1.48
PPP1R9A-201ENST00000289495 ZNF496Q96IT1 587 aaPredicted RBP5.81□□□□□ -1.48
PPP1R9A-201ENST00000289495 ZSCAN31Q96LW9 406 aaPredicted RBP5.81□□□□□ -1.48
PPP1R9A-201ENST00000289495 PRDM11Q9NQV5 511 aa5.81□□□□□ -1.48
PPP1R9A-201ENST00000289495 PDRG1Q9NUG6 133 aa5.81□□□□□ -1.48
PPP1R9A-201ENST00000289495 HEG1Q9ULI3 1381 aa5.81□□□□□ -1.48
PPP1R9A-201ENST00000289495 NEURL1BA8MQ27 555 aa5.81□□□□□ -1.48
PPP1R9A-201ENST00000289495 DCBLD2Q96PD2 775 aa5.81□□□□□ -1.48
PPP1R9A-201ENST00000289495 BOLA2Q9H3K6 86 aa5.81□□□□□ -1.48
PPP1R9A-201ENST00000289495 CCDC171Q6TFL3 1326 aa5.81□□□□□ -1.48
PPP1R9A-201ENST00000289495 KDM6AO15550 1401 aaPredicted RBP5.81□□□□□ -1.48
PPP1R9A-201ENST00000289495 MEGF6O75095 1541 aa5.81□□□□□ -1.48
PPP1R9A-201ENST00000289495 MSNP26038 577 aaKnown RBP5.81□□□□□ -1.48
PPP1R9A-201ENST00000289495 ATN1P54259 1190 aaPredicted RBP5.81□□□□□ -1.48
PPP1R9A-201ENST00000289495 AK2P54819 239 aa5.81□□□□□ -1.48
PPP1R9A-201ENST00000289495 GCKRQ14397 625 aa5.81□□□□□ -1.48
PPP1R9A-201ENST00000289495 NAP1L5Q96NT1 182 aaPredicted RBP5.81□□□□□ -1.48
PPP1R9A-201ENST00000289495 SH2B1Q9NRF2 756 aaPredicted RBP5.81□□□□□ -1.48
PPP1R9A-201ENST00000289495 RBM27Q9P2N5 1060 aaKnown RBP5.81□□□□□ -1.48
PPP1R9A-201ENST00000289495 RGPD5Q99666 1765 aa5.8□□□□□ -1.48
PPP1R9A-201ENST00000289495 ALS2Q96Q42 1657 aa5.8□□□□□ -1.48
PPP1R9A-201ENST00000289495 ESPNB1AK53 854 aa5.8□□□□□ -1.48
PPP1R9A-201ENST00000289495 RIOK3O14730 519 aaKnown RBP5.8□□□□□ -1.48
PPP1R9A-201ENST00000289495 POTEIP0CG38 1075 aa5.8□□□□□ -1.48
PPP1R9A-201ENST00000289495 TOM1L2Q6ZVM7 507 aa5.8□□□□□ -1.48
PPP1R9A-201ENST00000289495 UBE3BQ7Z3V4 1068 aa5.8□□□□□ -1.48
PPP1R9A-201ENST00000289495 IL25Q9H293 177 aa5.8□□□□□ -1.48
PPP1R9A-201ENST00000289495 RRAGDQ9NQL2 400 aaPredicted RBP5.8□□□□□ -1.48
PPP1R9A-201ENST00000289495 PLEKHG2Q9H7P9 1386 aa5.8□□□□□ -1.48
PPP1R9A-201ENST00000289495 UTYO14607 1347 aa5.8□□□□□ -1.48
PPP1R9A-201ENST00000289495 NMIQ13287 307 aaPredicted RBP5.8□□□□□ -1.48
PPP1R9A-201ENST00000289495 ZNF579Q8NAF0 562 aaKnown RBP5.8□□□□□ -1.48
PPP1R9A-201ENST00000289495 BMP2KQ9NSY1 1161 aaPredicted RBP5.8□□□□□ -1.48
PPP1R9A-201ENST00000289495 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.8□□□□□ -1.48
PPP1R9A-201ENST00000289495 ZDHHC9Q9Y397 364 aa5.8□□□□□ -1.48
PPP1R9A-201ENST00000289495 RBM8AQ9Y5S9 174 aaKnown RBP5.8□□□□□ -1.48
PPP1R9A-201ENST00000289495 PCDH11XQ9BZA7 1347 aa5.8□□□□□ -1.48
PPP1R9A-201ENST00000289495 PCDH11YQ9BZA8 1340 aa5.8□□□□□ -1.48
PPP1R9A-201ENST00000289495 A0A087WZG4 1122 aa5.8□□□□□ -1.48
PPP1R9A-201ENST00000289495 SYCE3A1L190 88 aa5.8□□□□□ -1.48
PPP1R9A-201ENST00000289495 VPS37CA5D8V6 355 aaPredicted RBP5.8□□□□□ -1.48
PPP1R9A-201ENST00000289495 IGKV5-2P06315 115 aa5.8□□□□□ -1.48
PPP1R9A-201ENST00000289495 PSEN1P49768 467 aa5.8□□□□□ -1.48
PPP1R9A-201ENST00000289495 TPRNQ4KMQ1 711 aa5.8□□□□□ -1.48
PPP1R9A-201ENST00000289495 BLOC1S2Q6QNY1 142 aa5.8□□□□□ -1.48
PPP1R9A-201ENST00000289495 CCDC83Q8IWF9 413 aa5.8□□□□□ -1.48
PPP1R9A-201ENST00000289495 EAF2Q96CJ1 260 aaPredicted RBP5.8□□□□□ -1.48
PPP1R9A-201ENST00000289495 IL17RAQ96F46 866 aa5.8□□□□□ -1.48
PPP1R9A-201ENST00000289495 SIPA1L3O60292 1781 aaPredicted RBP5.79□□□□□ -1.48
PPP1R9A-201ENST00000289495 SCN11AQ9UI33 1791 aa5.79□□□□□ -1.48
PPP1R9A-201ENST00000289495 TTLL13PA6NNM8 815 aa5.79□□□□□ -1.48
PPP1R9A-201ENST00000289495 PIP4K2AP48426 406 aaPredicted RBP5.79□□□□□ -1.48
PPP1R9A-201ENST00000289495 FGD1P98174 961 aa5.79□□□□□ -1.48
PPP1R9A-201ENST00000289495 ANKRD1Q15327 319 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms