RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 TSPYL6Q8N831 410 aa17.7■□□□□ 0.42
SHROOM4-201ENST00000289292 RBM8AQ9Y5S9 174 aaKnown RBP17.7■□□□□ 0.42
SHROOM4-201ENST00000289292 HMGXB3Q12766 1538 aa17.7■□□□□ 0.42
SHROOM4-201ENST00000289292 NLRP5P59047 1200 aa17.7■□□□□ 0.42
SHROOM4-201ENST00000289292 IFFO1Q0D2I5 559 aa17.7■□□□□ 0.42
SHROOM4-201ENST00000289292 ZSCAN29Q8IWY8 852 aaPredicted RBP17.69■□□□□ 0.42
SHROOM4-201ENST00000289292 WASLO00401 505 aaPredicted RBP17.69■□□□□ 0.42
SHROOM4-201ENST00000289292 Q6ZUG5 572 aa17.69■□□□□ 0.42
SHROOM4-201ENST00000289292 FAM107BQ9H098 131 aa17.69■□□□□ 0.42
SHROOM4-201ENST00000289292 ZBTB3Q9H5J0 574 aa17.69■□□□□ 0.42
SHROOM4-201ENST00000289292 IL16Q14005 1332 aa17.69■□□□□ 0.42
SHROOM4-201ENST00000289292 TMEM67Q5HYA8 995 aa17.69■□□□□ 0.42
SHROOM4-201ENST00000289292 DTNBO60941 627 aa17.69■□□□□ 0.42
SHROOM4-201ENST00000289292 MARCKSP29966 332 aaPredicted RBP17.69■□□□□ 0.42
SHROOM4-201ENST00000289292 FAM200AQ8TCP9 573 aa17.69■□□□□ 0.42
SHROOM4-201ENST00000289292 METAP2P50579 478 aaKnown RBP eCLIP17.68■□□□□ 0.42
SHROOM4-201ENST00000289292 KRT24Q2M2I5 525 aa17.68■□□□□ 0.42
SHROOM4-201ENST00000289292 JADE2Q9NQC1 790 aa17.68■□□□□ 0.42
SHROOM4-201ENST00000289292 AFMP43652 599 aa17.68■□□□□ 0.42
SHROOM4-201ENST00000289292 C17orf53Q8N3J3 647 aaPredicted RBP17.68■□□□□ 0.42
SHROOM4-201ENST00000289292 DBF4Q9UBU7 674 aaPredicted RBP17.68■□□□□ 0.42
SHROOM4-201ENST00000289292 AK2P54819 239 aa17.68■□□□□ 0.42
SHROOM4-201ENST00000289292 NUTM2BA6NNL0 878 aaPredicted RBP17.68■□□□□ 0.42
SHROOM4-201ENST00000289292 NUTM2EB1AL46 878 aaPredicted RBP17.68■□□□□ 0.42
SHROOM4-201ENST00000289292 MTIF2P46199 727 aaKnown RBP17.68■□□□□ 0.42
SHROOM4-201ENST00000289292 TYRO3Q06418 890 aa17.68■□□□□ 0.42
SHROOM4-201ENST00000289292 NUTM2AQ8IVF1 878 aaPredicted RBP17.68■□□□□ 0.42
SHROOM4-201ENST00000289292 CHPF2Q9P2E5 772 aa17.68■□□□□ 0.42
SHROOM4-201ENST00000289292 GBP2P32456 591 aaPredicted RBP17.68■□□□□ 0.42
SHROOM4-201ENST00000289292 GTF2A1P52655 376 aaPredicted RBP17.68■□□□□ 0.42
SHROOM4-201ENST00000289292 IFIT5Q13325 482 aaKnown RBP17.68■□□□□ 0.42
SHROOM4-201ENST00000289292 THEMISQ8N1K5 641 aaPredicted RBP17.68■□□□□ 0.42
SHROOM4-201ENST00000289292 TSG101Q99816 390 aa17.68■□□□□ 0.42
SHROOM4-201ENST00000289292 SEC63Q9UGP8 760 aaKnown RBP17.68■□□□□ 0.42
SHROOM4-201ENST00000289292 GPTP24298 496 aa17.67■□□□□ 0.42
SHROOM4-201ENST00000289292 ANKRD44Q8N8A2 993 aa17.67■□□□□ 0.42
SHROOM4-201ENST00000289292 HLTFQ14527 1009 aaKnown RBP eCLIP17.67■□□□□ 0.42
SHROOM4-201ENST00000289292 HYPKQ9NX55 129 aa17.67■□□□□ 0.42
SHROOM4-201ENST00000289292 MCM3P25205 808 aa17.67■□□□□ 0.42
SHROOM4-201ENST00000289292 CHST3Q7LGC8 479 aa17.67■□□□□ 0.42
SHROOM4-201ENST00000289292 PRDM11Q9NQV5 511 aa17.67■□□□□ 0.42
SHROOM4-201ENST00000289292 IARSP41252 1262 aaKnown RBP17.67■□□□□ 0.42
SHROOM4-201ENST00000289292 SYKP43405 635 aa17.67■□□□□ 0.42
SHROOM4-201ENST00000289292 PIK3R4Q99570 1358 aa17.67■□□□□ 0.42
SHROOM4-201ENST00000289292 ATP2C2O75185 946 aa17.67■□□□□ 0.42
SHROOM4-201ENST00000289292 MKNK2Q9HBH9 465 aa17.67■□□□□ 0.42
SHROOM4-201ENST00000289292 PA2G4Q9UQ80 394 aaKnown RBP17.67■□□□□ 0.42
SHROOM4-201ENST00000289292 CPA1P15085 419 aa17.66■□□□□ 0.42
SHROOM4-201ENST00000289292 MCM6Q14566 821 aa17.66■□□□□ 0.42
SHROOM4-201ENST00000289292 NSD2O96028 1365 aa17.66■□□□□ 0.42
SHROOM4-201ENST00000289292 MAATS1Q7Z4T9 603 aa17.66■□□□□ 0.42
SHROOM4-201ENST00000289292 USO1O60763 962 aaKnown RBP17.66■□□□□ 0.42
SHROOM4-201ENST00000289292 UBE3BQ7Z3V4 1068 aa17.66■□□□□ 0.42
SHROOM4-201ENST00000289292 GOLGA6L10A0A0M3HER8 536 aa17.66■□□□□ 0.42
SHROOM4-201ENST00000289292 KLF18A0A0U1RQI7 1052 aa17.66■□□□□ 0.42
SHROOM4-201ENST00000289292 NMIQ13287 307 aaPredicted RBP17.65■□□□□ 0.42
SHROOM4-201ENST00000289292 PAFAH1B1P43034 410 aa17.65■□□□□ 0.42
SHROOM4-201ENST00000289292 ZRANB1Q9UGI0 708 aa17.65■□□□□ 0.42
SHROOM4-201ENST00000289292 PLEKHM2Q8IWE5 1019 aa17.65■□□□□ 0.42
SHROOM4-201ENST00000289292 CTCFLQ8NI51 663 aaPredicted RBP17.65■□□□□ 0.42
SHROOM4-201ENST00000289292 DRC1Q96MC2 740 aa17.65■□□□□ 0.42
SHROOM4-201ENST00000289292 SYT1P21579 422 aa17.65■□□□□ 0.42
SHROOM4-201ENST00000289292 ANKRD36BQ8N2N9 1353 aa17.65■□□□□ 0.42
SHROOM4-201ENST00000289292 MAP3K12Q12852 859 aa17.65■□□□□ 0.42
SHROOM4-201ENST00000289292 CCDC102BQ68D86 513 aa17.65■□□□□ 0.42
SHROOM4-201ENST00000289292 ZSCAN16Q9H4T2 348 aaPredicted RBP17.65■□□□□ 0.42
SHROOM4-201ENST00000289292 RSPH14Q9UHP6 348 aa17.65■□□□□ 0.42
SHROOM4-201ENST00000289292 CCDC196A0A1B0GTZ2 297 aa17.64■□□□□ 0.42
SHROOM4-201ENST00000289292 POTEB2H3BUK9 544 aa17.64■□□□□ 0.41
SHROOM4-201ENST00000289292 INCENPQ9NQS7 918 aa17.64■□□□□ 0.41
SHROOM4-201ENST00000289292 TMCO5BA8MYB1 307 aa17.64■□□□□ 0.41
SHROOM4-201ENST00000289292 CEP85Q6P2H3 762 aa17.64■□□□□ 0.41
SHROOM4-201ENST00000289292 KARSQ15046 597 aaKnown RBP17.63■□□□□ 0.41
SHROOM4-201ENST00000289292 SPTY2D1Q68D10 685 aaPredicted RBP17.63■□□□□ 0.41
SHROOM4-201ENST00000289292 USP26Q9BXU7 913 aa17.63■□□□□ 0.41
SHROOM4-201ENST00000289292 C14orf93Q9H972 538 aaKnown RBP17.63■□□□□ 0.41
SHROOM4-201ENST00000289292 PRAG1Q86YV5 1406 aa17.63■□□□□ 0.41
SHROOM4-201ENST00000289292 IDI1Q13907 227 aa17.63■□□□□ 0.41
SHROOM4-201ENST00000289292 HMG20BQ9P0W2 317 aa17.63■□□□□ 0.41
SHROOM4-201ENST00000289292 STARD3NLO95772 234 aa17.63■□□□□ 0.41
SHROOM4-201ENST00000289292 LMOD1P29536 600 aaPredicted RBP17.63■□□□□ 0.41
SHROOM4-201ENST00000289292 MNAT1P51948 309 aa17.63■□□□□ 0.41
SHROOM4-201ENST00000289292 ARHGAP45Q92619 1136 aa17.63■□□□□ 0.41
SHROOM4-201ENST00000289292 OTUD7AQ8TE49 926 aaPredicted RBP17.63■□□□□ 0.41
SHROOM4-201ENST00000289292 CTNNBL1Q8WYA6 563 aaPredicted RBP17.63■□□□□ 0.41
SHROOM4-201ENST00000289292 GTPBP4Q9BZE4 634 aaKnown RBP17.63■□□□□ 0.41
SHROOM4-201ENST00000289292 UGGT2Q9NYU1 1516 aa17.63■□□□□ 0.41
SHROOM4-201ENST00000289292 SYT10Q6XYQ8 523 aa17.63■□□□□ 0.41
SHROOM4-201ENST00000289292 NCOA7Q8NI08 942 aa17.63■□□□□ 0.41
SHROOM4-201ENST00000289292 PHAXQ9H814 394 aaKnown RBP17.63■□□□□ 0.41
SHROOM4-201ENST00000289292 TRMT112Q9UI30 125 aaKnown RBP17.63■□□□□ 0.41
SHROOM4-201ENST00000289292 BIVM-ERCC5R4GMW8 1640 aa17.63■□□□□ 0.41
SHROOM4-201ENST00000289292 PRPF4BQ13523 1007 aaKnown RBP17.62■□□□□ 0.41
SHROOM4-201ENST00000289292 ZBTB40Q9NUA8 1239 aa17.62■□□□□ 0.41
SHROOM4-201ENST00000289292 ADGRL1O94910 1474 aa17.62■□□□□ 0.41
SHROOM4-201ENST00000289292 CCDC194A0A1B0GVG4 234 aa17.62■□□□□ 0.41
SHROOM4-201ENST00000289292 MYO1BO43795 1136 aa17.62■□□□□ 0.41
SHROOM4-201ENST00000289292 ANKRD18AQ8IVF6 992 aa17.62■□□□□ 0.41
SHROOM4-201ENST00000289292 KCNH5Q8NCM2 988 aa17.62■□□□□ 0.41
SHROOM4-201ENST00000289292 VAT1LQ9HCJ6 419 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms